MU45086 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU45086
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Abscisic stress ripening protein
Location	chr3 : 16737918 .. 16738550 (+)
Sequence length	547

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATCCCATCGCAAAGCCCTCAAAACCATGGCAGAAGAAGAGTAAGGCCATCACCATCACCACCTTTTCCACCACCACAAGGAAGGAGAAGAGAGCTCTGATGTTGTCGACTACAAGAAAGAGAAGAAGCACCACAAGCACCTCGAACACCTTGGTGAGCTCGGTGCCGCCACAGCTGGTGTCTATGCTCTGCGTGAGAAGCACGAGGCAAAGAAAGACAGCGAACACAGCCGTGGGCATAAGATAAAGGAGGAAGTTGCGGCGGTGGTGGCGGCTGGGGCCGGGGAATTTGTGCTCTATGAGCATCATAAAGAAAAGGAAGCAAAGAGAGAAGAGAAAGAGGCTAATGGAAAGGAACATCACCACCATCTTTTTTGAAAAACTTTGCCTTTCATATTTATATATATATATATATATGATGGGGTTTAATTGTTTGTTTCTTTTGGCTTTGTTTGGGTTTTAAGAGCTTAATCTATTAAATGGTTTGTAAAATAAATTTGAGATGCTAAAGTAAATAAAAATATTAATGATCTTTCATTGTACTTGGAT

Library


Library category	ESTs
melon SFTP2 library	3
Melon mature fruit library	1

Homology

[Close]

BLAST of MU45086 vs. TrEMBL
Match: A0A0A0KBV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014820 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-07
Identity = 37/94 (39.36%), Postives = 39/94 (41.49%), Query Frame = 2


Query: 92  SSDVVDYXXXXXXXXXXXXXXXXXAATAGVYALREKHEAKKDSEHSRGHKIKXXXXXXXX 151
           SS+VVDY                 A  AG YAL EKHEAKKDSEHS  HKIK        
Sbjct: 23  SSEVVDYKEEKKHHKHLEHLGELGAVAAGAYALHEKHEAKKDSEHSHEHKIKEEVGAAVV 82

Query: 152 XXXXXFVLYXXXXXXXXXXXXXXXXXXXHHHHLF 211
                FVL+                   HHHHLF
Sbjct: 83  AGATGFVLHEHHEKKEAKREEKEGHGKEHHHHLF 116

Query: 212  271
           
Sbjct: 143  116

Query: 272  331
           
Sbjct: 203  116

Query: 332  374
           
Sbjct: 263  116

[Close]

BLAST of MU45086 vs. TrEMBL
Match: Q93VD6_CUCME (Abscisic acid response protein OS=Cucumis melo GN=Asr1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-07
Identity = 39/94 (41.49%), Postives = 40/94 (42.55%), Query Frame = 2


Query: 92  SSDVVDYXXXXXXXXXXXXXXXXXAATAGVYALREKHEAKKDSEHSRGHKIKXXXXXXXX 151
           SSDVVDY                 AA AG YAL EKHEAKKDSEHS  HKIK        
Sbjct: 23  SSDVVDYKKEKKHHKHLEHLGELGAAAAGAYALHEKHEAKKDSEHSHEHKIKEEVGAAVV 82

Query: 152 XXXXXFVLYXXXXXXXXXXXXXXXXXXXHHHHLF 211
                FVL+                   HHHHLF
Sbjct: 83  AGAAGFVLH----EHHEKKEAKREEKEEHHHHLF 112

Query: 212  271
           
Sbjct: 143  112

Query: 272  331
           
Sbjct: 203  112

Query: 332  374
           
Sbjct: 263  112

[Close]

BLAST of MU45086 vs. TrEMBL
Match: K4FAV1_9ROSA (Abscisic stress ripening protein OS=Ziziphus mauritiana GN=Asr PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.3e-06
Identity = 36/113 (31.86%), Postives = 45/113 (39.82%), Query Frame = 2


Query: 98  DVVDYXXXXXXXXXXXXXXXXXAATAGVYALREKHEAKKDSEHSRGHKIKXXXXXXXXXX 157
           D VDY                 AA AG +AL EKHEAKKD+EHS  HKI+          
Sbjct: 182 DEVDYKKEEKQHKHREHLGELGAAAAGAFALHEKHEAKKDTEHSHRHKIEEEVAAVAAVG 241

Query: 158 XXXFVLYXXXXXXXXXXXXXXXXXXXHHHHLF*KTLPFIFIYIYIYDGV*LFV 217
              F L+                   HHHHLF      +++Y+     + LFV
Sbjct: 242 SGGFALHEHHDRKEAKEQDEESHGKKHHHHLFNPVYDLLYLYLLYLITLVLFV 294

Query: 218  277
           
Sbjct: 302  294

Query: 278  337
           
Sbjct: 362  294

Query: 338  397
           
Sbjct: 422  294

Query: 398  437
           
Sbjct: 482  294

[Close]

BLAST of MU45086 vs. NCBI nr
Match: gi|659126243|ref|XP_008463084.1| (PREDICTED: abscisic stress-ripening protein 2-like [Cucumis melo])

HSP 1 Score: 72.4 bits (176), Expect = 9.2e-10
Identity = 43/94 (45.74%), Postives = 44/94 (46.81%), Query Frame = 2


Query: 92  SSDVVDYXXXXXXXXXXXXXXXXXAATAGVYALREKHEAKKDSEHSRGHKIKXXXXXXXX 151
           SSDVV+Y                 AA AGVYALREKHEAKKDSEHSRGHKIK        
Sbjct: 23  SSDVVNYKKEEKHYKHLEHLGELGAAAAGVYALREKHEAKKDSEHSRGHKIKEEVAAVVA 82

Query: 152 XXXXXFVLYXXXXXXXXXXXXXXXXXXXHHHHLF 211
                FVLY                   HHHHLF
Sbjct: 83  AGAGEFVLYEHHKEKEAKREEKEANGKEHHHHLF 116

Query: 212  271
           
Sbjct: 143  116

Query: 272  331
           
Sbjct: 203  116

Query: 332  374
           
Sbjct: 263  116

[Close]

BLAST of MU45086 vs. NCBI nr
Match: gi|449441222|ref|XP_004138381.1| (PREDICTED: abscisic stress-ripening protein 1-like [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-06
Identity = 37/94 (39.36%), Postives = 39/94 (41.49%), Query Frame = 2


Query: 92  SSDVVDYXXXXXXXXXXXXXXXXXAATAGVYALREKHEAKKDSEHSRGHKIKXXXXXXXX 151
           SS+VVDY                 A  AG YAL EKHEAKKDSEHS  HKIK        
Sbjct: 23  SSEVVDYKEEKKHHKHLEHLGELGAVAAGAYALHEKHEAKKDSEHSHEHKIKEEVGAAVV 82

Query: 152 XXXXXFVLYXXXXXXXXXXXXXXXXXXXHHHHLF 211
                FVL+                   HHHHLF
Sbjct: 83  AGATGFVLHEHHEKKEAKREEKEGHGKEHHHHLF 116

Query: 212  271
           
Sbjct: 143  116

Query: 272  331
           
Sbjct: 203  116

Query: 332  374
           
Sbjct: 263  116

[Close]

BLAST of MU45086 vs. NCBI nr
Match: gi|781978130|ref|NP_001292579.1| (abscisic stress-ripening protein 1-like [Cucumis melo])

HSP 1 Score: 59.7 bits (143), Expect = 6.2e-06
Identity = 39/94 (41.49%), Postives = 40/94 (42.55%), Query Frame = 2


Query: 92  SSDVVDYXXXXXXXXXXXXXXXXXAATAGVYALREKHEAKKDSEHSRGHKIKXXXXXXXX 151
           SSDVVDY                 AA AG YAL EKHEAKKDSEHS  HKIK        
Sbjct: 23  SSDVVDYKKEKKHHKHLEHLGELGAAAAGAYALHEKHEAKKDSEHSHEHKIKEEVGAAVV 82

Query: 152 XXXXXFVLYXXXXXXXXXXXXXXXXXXXHHHHLF 211
                FVL+                   HHHHLF
Sbjct: 83  AGAAGFVLH----EHHEKKEAKREEKEEHHHHLF 112

Query: 212  271
           
Sbjct: 143  112

Query: 272  331
           
Sbjct: 203  112

Query: 332  374
           
Sbjct: 263  112

The following BLAST results are available for this feature:

BLAST of MU45086 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBV5_CUCSA	3.0e-07	39.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014820 PE=4 SV=1	[more]
Q93VD6_CUCME	6.6e-07	41.49	Abscisic acid response protein OS=Cucumis melo GN=Asr1 PE=2 SV=1	[more]
K4FAV1_9ROSA	3.3e-06	31.86	Abscisic stress ripening protein OS=Ziziphus mauritiana GN=Asr PE=2 SV=1	[more]

BLAST of MU45086 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126243\|ref\|XP_008463084.1\|	9.2e-10	45.74	PREDICTED: abscisic stress-ripening protein 2-like [Cucumis melo]	[more]
gi\|449441222\|ref\|XP_004138381.1\|	2.8e-06	39.36	PREDICTED: abscisic stress-ripening protein 1-like [Cucumis sativus]	[more]
gi\|781978130\|ref\|NP_001292579.1\|	6.2e-06	41.49	abscisic stress-ripening protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR003496	ABA_WDS

Vocabulary: **Biological Process**
Term	Definition
GO:0006950	response to stress

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C025026	MELO3C025026	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AA4YH24FM1	AA4YH24FM1	EST
AA4YK02FM1	AA4YK02FM1	EST
AA5YP18FM1	AA5YP18FM1	EST
FR10H17	FR10H17	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003496	ABA/WDS induced protein	PFAM	PF02496	ABA_WDS	coord: 36..113 score: 1.7
None	No IPR available	PANTHER	PTHR33801	FAMILY NOT NAMED	coord: 24..124 score: 7.2
None	No IPR available	PANTHER	PTHR33801:SF7	SUBFAMILY NOT NAMED	coord: 24..124 score: 7.2