MU44934 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU44934
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Phloem filament protein
Location	chr1 : 1229522 .. 1231969 (-)
Sequence length	618

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AACACACACCACAAAATTTTCAATACCATCAAATATCAACTAAAGATCACAAGAAAATGACACTTGGTATTGGTGGAAGAATTGGTATTGGCTTTGGTCTTCCTGGCTTCAATATATCGATCGGCGGAGGCATTGGTATCGGGGGTAGAAAGGGGGGGTGCAAGAGTCATGATCCTTCAAAAAAATGGACTGAAATTAAGAGTGTGAACGATCCTGCTATCATAGAAATTGCTAAGTTTGCAGTGAAAGTCTTCAACCAAAAACATGGAAACAATCTCCAGTTTCAAGCCGTTTTGGAAGCTTGGGTTGTTGTTCATGTTGATGGCAAGAAAGAGTATAGTATTGAATTAGTAGCAAAAGACTGTTTGCATCGTTGCCTCCAGTATCATGCTGTTGTGATTGAAATCTGTGGCACTCCCCCTGGCTGGAATCTTGTGTCTTTCGACCAAATCGTCGAGGAAAACTGAAAAAGTTATATGTATAATCGAAAGTTTATACTTATATATGTGCGAGATCTACGCAATAATAAATCTTATATGATACCGTAATGTTGACCATCTCCTACTTTCTTTCTTCACTATATCTATTAAAAAATAATCGAGGTCAAACCACGTTTTT

Library


Library category	ESTs
melon VFTP2 library	1
melon PFTP2 library	3

Homology

[Close]

BLAST of MU44934 vs. TrEMBL
Match: E5GCR5_CUCME (Phloem filament protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.0e-53
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY
Sbjct: 35  CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 94

Query: 219 SIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSFDQIVEEN 278
           SIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSF+QIVEEN
Sbjct: 95  SIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSFNQIVEEN 136

Query: 279  338
           
Sbjct: 155  136

Query: 339  398
           
Sbjct: 215  136

Query: 399  458
           
Sbjct: 275  136

Query: 459  465
           
Sbjct: 335  136

[Close]

BLAST of MU44934 vs. TrEMBL
Match: A0A0A0K477_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067390 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.0e-36
Identity = 85/151 (56.29%), Postives = 95/151 (62.91%), Query Frame = 3


Query: 6   TPQNFQYHQISTK-DHKKMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSHDPSK 65
           T QNFQY+QISTK  H KMT                                CKSHDPSK
Sbjct: 6   TKQNFQYYQISTKLAHIKMTIGIGGGIGIGIGVPGIKVSIGGGIGIGSRKGGCKSHDPSK 65

Query: 66  KWTEIKSVN-DPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEYSIELVAK 125
           KW+++ +   D  II +A FAV  FNQK+GN L F AVLEAWVVV  DGKKEYSIELVAK
Sbjct: 66  KWSQVPNAQADQVIINVANFAVAAFNQKYGNKLVFHAVLEAWVVVLPDGKKEYSIELVAK 125

Query: 126 DCLHRCLQYHAVVIEICGTPPGWNLVSFDQI 185
           DCL+RCL +HA+VIEI G PPGWNL SF QI
Sbjct: 126 DCLNRCLYFHAIVIEIVGVPPGWNLFSFTQI 156

Query: 186  245
           
Sbjct: 186  156

Query: 246  305
           
Sbjct: 246  156

Query: 306  365
           
Sbjct: 306  156

Query: 366  425
           
Sbjct: 366  156

Query: 426  453
           
Sbjct: 426  156

[Close]

BLAST of MU44934 vs. TrEMBL
Match: E5GCR6_CUCME (Phloem filament protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSH+PSKKW ++ +V  P ++E AKFAV  FN+K+ NNL+FQ V EAW V  V+ +KEY
Sbjct: 35  CKSHNPSKKWIQLHNVKAPDVLEAAKFAVDAFNKKYENNLEFQYVTEAW-VHEVNNEKEY 94

Query: 219 SIELVAKDCLHRCLQYHAVVIE-ICGTPPGWNLVSFDQIVE 278
           SIELVAKDC HR L++HAVVIE        W LVSF++I +
Sbjct: 95  SIELVAKDCFHRLLEFHAVVIEKTVDHKKIWILVSFERIFD 134

Query: 279  338
           
Sbjct: 155  134

Query: 339  398
           
Sbjct: 215  134

Query: 399  458
           
Sbjct: 275  134

[Close]

BLAST of MU44934 vs. TrEMBL
Match: A0A0A0K660_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G067370 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 61/101 (60.40%), Postives = 71/101 (70.30%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSHDPSKKW  +   ND  ++E AKFAV  FN+K+GNNL FQ VLEAWV  +  GKKEY
Sbjct: 37  CKSHDPSKKW--VICPNDQ-VVEAAKFAVAEFNKKYGNNLVFQVVLEAWVFTNPCGKKEY 96

Query: 219 SIELVAKD-CLHRCLQYHAVVIEICGTPPGWNLVSFDQIVE 278
           SIELV  D CL+R L++HAVV E         LVSFDQIV+
Sbjct: 97  SIELVVIDGCLNRVLKFHAVVTETPCAARKRTLVSFDQIVD 134

Query: 279  338
           
Sbjct: 157  134

Query: 339  398
           
Sbjct: 217  134

Query: 399  458
           
Sbjct: 277  134

[Close]

BLAST of MU44934 vs. TrEMBL
Match: A0A0A0K281_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067350 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSHDPSKKW+     ND  +   A+FAV  +N+KHG NL FQ+VLEAWV V+  GKKEY
Sbjct: 34  CKSHDPSKKWSVCP--NDRVVEIYARFAVDEYNRKHGRNLVFQSVLEAWVYVYPCGKKEY 93

Query: 219 SIELVAKD-CLHRCLQYHAVVIEICGTPPGWNLVSFDQI 278
           SIELV ++ C +  L+YHAVV E         LVSFDQI
Sbjct: 94  SIELVVREGCGNHVLKYHAVVTETGCAARRKTLVSFDQI 130

Query: 279  338
           
Sbjct: 154  130

Query: 339  398
           
Sbjct: 214  130

Query: 399  453
           
Sbjct: 274  130

[Close]

BLAST of MU44934 vs. NCBI nr
Match: gi|659110227|ref|XP_008455116.1| (PREDICTED: uncharacterized protein LOC103495368 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 1.8e-54
Identity = 111/147 (75.51%), Postives = 114/147 (77.55%), Query Frame = 3


Query: 27  HQISTKD-HKKMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSHDPSKKWTEIKS 86
           +QISTKD +KKMT                                CKSHDPSKKWTEIKS
Sbjct: 15  YQISTKDQYKKMTLGIGGGISIGLGIPGINISIGGGIGIRGRKGGCKSHDPSKKWTEIKS 74

Query: 87  VNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEYSIELVAKDCLHRCLQ 146
           VNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEYSIELVAKDCLHRCLQ
Sbjct: 75  VNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEYSIELVAKDCLHRCLQ 134

Query: 147 YHAVVIEICGTPPGWNLVSFDQIVEEN 206
           YHAVVIEICGTPPGWNLVSF+QIVEEN
Sbjct: 135 YHAVVIEICGTPPGWNLVSFNQIVEEN 161

Query: 207  266
           
Sbjct: 195  161

Query: 267  326
           
Sbjct: 255  161

Query: 327  386
           
Sbjct: 315  161

Query: 387  446
           
Sbjct: 375  161

Query: 447  465
           
Sbjct: 435  161

[Close]

BLAST of MU44934 vs. NCBI nr
Match: gi|307136458|gb|ADN34263.1| (phloem filament protein [Cucumis melo subsp. melo])

HSP 1 Score: 217.6 bits (553), Expect = 2.0e-53
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY
Sbjct: 35  CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 94

Query: 219 SIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSFDQIVEEN 278
           SIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSF+QIVEEN
Sbjct: 95  SIELVAKDCLHRCLQYHAVVIEICGTPPGWNLVSFNQIVEEN 136

Query: 279  338
           
Sbjct: 155  136

Query: 339  398
           
Sbjct: 215  136

Query: 399  458
           
Sbjct: 275  136

Query: 459  465
           
Sbjct: 335  136

[Close]

BLAST of MU44934 vs. NCBI nr
Match: gi|778724618|ref|XP_011658840.1| (PREDICTED: uncharacterized protein LOC105436098 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 7.6e-37
Identity = 85/151 (56.29%), Postives = 95/151 (62.91%), Query Frame = 3


Query: 6   TPQNFQYHQISTK-DHKKMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKSHDPSK 65
           T QNFQY+QISTK  H KMT                                CKSHDPSK
Sbjct: 6   TKQNFQYYQISTKLAHIKMTIGIGGGIGIGIGVPGIKVSIGGGIGIGSRKGGCKSHDPSK 65

Query: 66  KWTEIKSVN-DPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEYSIELVAK 125
           KW+++ +   D  II +A FAV  FNQK+GN L F AVLEAWVVV  DGKKEYSIELVAK
Sbjct: 66  KWSQVPNAQADQVIINVANFAVAAFNQKYGNKLVFHAVLEAWVVVLPDGKKEYSIELVAK 125

Query: 126 DCLHRCLQYHAVVIEICGTPPGWNLVSFDQI 185
           DCL+RCL +HA+VIEI G PPGWNL SF QI
Sbjct: 126 DCLNRCLYFHAIVIEIVGVPPGWNLFSFTQI 156

Query: 186  245
           
Sbjct: 186  156

Query: 246  305
           
Sbjct: 246  156

Query: 306  365
           
Sbjct: 306  156

Query: 366  425
           
Sbjct: 366  156

Query: 426  453
           
Sbjct: 426  156

[Close]

BLAST of MU44934 vs. NCBI nr
Match: gi|307136459|gb|ADN34264.1| (phloem filament protein [Cucumis melo subsp. melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSH+PSKKW ++ +V  P ++E AKFAV  FN+K+ NNL+FQ V EAW V  V+ +KEY
Sbjct: 35  CKSHNPSKKWIQLHNVKAPDVLEAAKFAVDAFNKKYENNLEFQYVTEAW-VHEVNNEKEY 94

Query: 219 SIELVAKDCLHRCLQYHAVVIE-ICGTPPGWNLVSFDQIVE 278
           SIELVAKDC HR L++HAVVIE        W LVSF++I +
Sbjct: 95  SIELVAKDCFHRLLEFHAVVIEKTVDHKKIWILVSFERIFD 134

Query: 279  338
           
Sbjct: 155  134

Query: 339  398
           
Sbjct: 215  134

Query: 399  458
           
Sbjct: 275  134

[Close]

BLAST of MU44934 vs. NCBI nr
Match: gi|778724613|ref|XP_011658839.1| (PREDICTED: uncharacterized protein LOC105436097 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21
Identity = 61/101 (60.40%), Postives = 71/101 (70.30%), Query Frame = 3


Query: 159 CKSHDPSKKWTEIKSVNDPAIIEIAKFAVKVFNQKHGNNLQFQAVLEAWVVVHVDGKKEY 218
           CKSHDPSKKW  +   ND  ++E AKFAV  FN+K+GNNL FQ VLEAWV  +  GKKEY
Sbjct: 37  CKSHDPSKKW--VICPNDQ-VVEAAKFAVAEFNKKYGNNLVFQVVLEAWVFTNPCGKKEY 96

Query: 219 SIELVAKD-CLHRCLQYHAVVIEICGTPPGWNLVSFDQIVE 278
           SIELV  D CL+R L++HAVV E         LVSFDQIV+
Sbjct: 97  SIELVVIDGCLNRVLKFHAVVTETPCAARKRTLVSFDQIVD 134

Query: 279  338
           
Sbjct: 157  134

Query: 339  398
           
Sbjct: 217  134

Query: 399  458
           
Sbjct: 277  134

The following BLAST results are available for this feature:

BLAST of MU44934 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCR5_CUCME	9.0e-53	99.02	Phloem filament protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0K477_CUCSA	2.0e-36	56.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067390 PE=4 SV=1	[more]
E5GCR6_CUCME	1.3e-22	57.43	Phloem filament protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0K660_CUCSA	1.2e-20	60.40	Phloem filament protein OS=Cucumis sativus GN=Csa_7G067370 PE=4 SV=1	[more]
A0A0A0K281_CUCSA	1.1e-18	56.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G067350 PE=4 SV=1	[more]

BLAST of MU44934 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110227\|ref\|XP_008455116.1\|	1.8e-54	75.51	PREDICTED: uncharacterized protein LOC103495368 [Cucumis melo]	[more]
gi\|307136458\|gb\|ADN34263.1\|	2.0e-53	99.02	phloem filament protein [Cucumis melo subsp. melo]	[more]
gi\|778724618\|ref\|XP_011658840.1\|	7.6e-37	56.29	PREDICTED: uncharacterized protein LOC105436098 [Cucumis sativus]	[more]
gi\|307136459\|gb\|ADN34264.1\|	2.8e-23	57.43	phloem filament protein [Cucumis melo subsp. melo]	[more]
gi\|778724613\|ref\|XP_011658839.1\|	3.4e-21	60.40	PREDICTED: uncharacterized protein LOC105436097 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR020381	Proteinase inhibitor I25, cystatin, conserved region

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018580	MELO3C018580	gene
MELO3C018579	MELO3C018579	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
HA4YN15FM1	HA4YN15FM1	EST
IA2YB14FM1	IA2YB14FM1	EST
IA33YE16FM1	IA33YE16FM1	EST
IA6YB02FM1	IA6YB02FM1	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020381	Proteinase inhibitor I25, cystatin, conserved region	PFAM	PF16845	SQAPI	coord: 47..117 score: 7.4
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 44..115 score: 5.
None	No IPR available	unknown	SSF54403	Cystatin/monellin	coord: 42..128 score: 6.8