MU44657 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU44657
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	rRNA-processing EFG1
Location	chr6 : 3552065 .. 3554737 (-)
Sequence length	930

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGAAAATCCAAAAAGTTAAAAAGAGAAAAAACTCATGTTGGGAGAGTGAAACAAAGAGAGAGATATCCCTCTCCGCCTCCGGTGCTATGAACACACCGGTCTGGTGCTGAGAGTCTCTTCGCAAAACCCTTGCCCTTCAAACCACGTTCTAGGGCACAATCTGACAATCACAATCCCCCCTCTGCCCCTCCTCTTCTCCCTTATCTCCTTTTTTCCCAACCATGGCCCATGGTGGCTACGGCAAGCGCAGGGTCAACCCGGCGGCACGCCGATCGAAGGGTTTGGCCGTTGAAAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAAATTCGATCTGCCGAGCGCATGCTTCGCAAGAATTTACCTGCTGAAGTGAGGGACGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCATTCTCGGTTGGCAGTTGAGCGCAAAATATTCTTGCGCGACAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGGCGGCTTGAGAAACTTCAGCGTGCTCCATCTGGCCAGTTTCAAGATTCAGATGTTGCAGATCAACTGTCTAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAGTATGTAGCTTTATTTACCGGAAGTGATGATTCAGACATGGTTGATAGGAGAAAGAAGTTACGTGAGCAGATTAAAGCCAATTTGATTGCTGCGGCGGCTAGTGGAAAGGATTTAGAAGAGACCGGTAGTGAGGATGATGGGTTGCTTGACATGAGCGAGGATGATTTCTTCTTATGTGGCAGCTCAAGTGATGAAGCAGATGCAGATGATGAGTGGACAGATAAAAGTACAAGGGAACAAGCTTCCAGTACTTCCGGCAAAGCAGCATCCGGCATGTCTAGTGATGAAAAAATCA

Library


Library category	ESTs
melon CM-Dea library	1
melon CM-PEa library	6
melon CM-TEa library	5
melon CM-VEa library	1

Homology

[Close]

BLAST of MU44657 vs. TrEMBL
Match: A0A0A0L7B4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143600 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 7.1e-102
Identity = 200/235 (85.11%), Postives = 201/235 (85.53%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
           GLRKQQEIHSRLAVERKIFLRD                     QRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           SEDDGLLDMSEDDFFLCG           WTDKSTREQASSTSGKAASGMSSDEK
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK 235

Query: 462  521
           
Sbjct: 241  235

Query: 522  581
           
Sbjct: 301  235

Query: 582  641
           
Sbjct: 361  235

Query: 642  701
           
Sbjct: 421  235

Query: 702  761
           
Sbjct: 481  235

Query: 762  821
           
Sbjct: 541  235

Query: 822  881
           
Sbjct: 601  235

Query: 882  927
           
Sbjct: 661  235

[Close]

BLAST of MU44657 vs. TrEMBL
Match: D7T782_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04640 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87
Identity = 174/238 (73.11%), Postives = 192/238 (80.67%), Query Frame = 3


Query: 222 MAHGGYGKRRV---NPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEK 281
           MAHGGYGKRRV    P +RRSKGLAVEKKPKSVSLKNQIRS ER+LRKNLP E+R+AQEK
Sbjct: 1   MAHGGYGKRRVAERKPESRRSKGLAVEKKPKSVSLKNQIRSTERILRKNLPPEMREAQEK 60

Query: 282 KLEGLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVA 341
           KLEGL+KQQEIH+RLAVERKIFLRD                     QRA SGQ Q+++VA
Sbjct: 61  KLEGLKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQQRAASGQAQEAEVA 120

Query: 342 DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE 401
           +QLSKLKEDLEYVRFFPKTEKYV+LF G DD+D+VDRR +LR+QIKAN+IAAAASGKDLE
Sbjct: 121 EQLSKLKEDLEYVRFFPKTEKYVSLFIGGDDTDIVDRRNRLRKQIKANIIAAAASGKDLE 180

Query: 402 ETGSEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           ETGSEDDGLLD+SEDDFFL G           WTDKSTREQASS SGKAASGMSSDE+
Sbjct: 181 ETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER 238

Query: 462  521
           
Sbjct: 241  238

Query: 522  581
           
Sbjct: 301  238

Query: 582  641
           
Sbjct: 361  238

Query: 642  701
           
Sbjct: 421  238

Query: 702  761
           
Sbjct: 481  238

Query: 762  821
           
Sbjct: 541  238

Query: 822  881
           
Sbjct: 601  238

Query: 882  927
           
Sbjct: 661  238

[Close]

BLAST of MU44657 vs. TrEMBL
Match: A5BK56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020767 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 4.9e-87
Identity = 173/238 (72.69%), Postives = 192/238 (80.67%), Query Frame = 3


Query: 222 MAHGGYGKRRV---NPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEK 281
           MAHGGYGKRRV    P +RRSKGLAV+KKPKSVSLKNQIRS ER+LRKNLP E+R+AQEK
Sbjct: 1   MAHGGYGKRRVAERKPESRRSKGLAVDKKPKSVSLKNQIRSTERILRKNLPPEMREAQEK 60

Query: 282 KLEGLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVA 341
           KLEGL+KQQEIH+RLAVERKIFLRD                     QRA SGQ Q+++VA
Sbjct: 61  KLEGLKKQQEIHTRLAVERKIFLRDRKIKFFERRKIERRIRRLEKQQRAASGQAQEAEVA 120

Query: 342 DQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLE 401
           +QLSKLKEDLEYVRFFPKTEKYV+LF G DD+D+VDRR +LR+QIKAN+IAAAASGKDLE
Sbjct: 121 EQLSKLKEDLEYVRFFPKTEKYVSLFIGGDDTDIVDRRNRLRKQIKANIIAAAASGKDLE 180

Query: 402 ETGSEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           ETGSEDDGLLD+SEDDFFL G           WTDKSTREQASS SGKAASGMSSDE+
Sbjct: 181 ETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQASSASGKAASGMSSDER 238

Query: 462  521
           
Sbjct: 241  238

Query: 522  581
           
Sbjct: 301  238

Query: 582  641
           
Sbjct: 361  238

Query: 642  701
           
Sbjct: 421  238

Query: 702  761
           
Sbjct: 481  238

Query: 762  821
           
Sbjct: 541  238

Query: 822  881
           
Sbjct: 601  238

Query: 882  927
           
Sbjct: 661  238

[Close]

BLAST of MU44657 vs. TrEMBL
Match: A0A059B2X5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03172 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.2e-85
Identity = 171/235 (72.77%), Postives = 185/235 (78.72%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRV PA RRSK   VEKKPK+VSLKNQIRS ERMLRK+LP EVR+AQEKKLE
Sbjct: 1   MAHGGYGKRRVKPAGRRSKAPGVEKKPKAVSLKNQIRSVERMLRKDLPPEVREAQEKKLE 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
           GL+KQQEIHSRLAVE+KIFLRD                     QR  SG  QD+ +A+QL
Sbjct: 61  GLKKQQEIHSRLAVEKKIFLRDRKIKFFERRKIERRVRRLEKMQRTSSGPEQDAAIAEQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYV+LF+G D+SDMVDRR  LR+QIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVSLFSGGDESDMVDRRNGLRKQIKANLIAAAASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           SEDDGLLD+SEDDFFL G           WTDKS REQASS SGKAASG+SSDEK
Sbjct: 181 SEDDGLLDLSEDDFFLAGSSSDEANADDEWTDKSLREQASSASGKAASGVSSDEK 235

Query: 462  521
           
Sbjct: 241  235

Query: 522  581
           
Sbjct: 301  235

Query: 582  641
           
Sbjct: 361  235

Query: 642  701
           
Sbjct: 421  235

Query: 702  761
           
Sbjct: 481  235

Query: 762  821
           
Sbjct: 541  235

Query: 822  881
           
Sbjct: 601  235

Query: 882  927
           
Sbjct: 661  235

[Close]

BLAST of MU44657 vs. TrEMBL
Match: B9RTF8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0909310 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 6.7e-84
Identity = 171/243 (70.37%), Postives = 189/243 (77.78%), Query Frame = 3


Query: 222 MAHGGYGKRRV----NPAARRSKGLAVEKKPK----SVSLKNQIRSAERMLRKNLPAEVR 281
           MAHGGYG RRV    +   RRSKGL V+KKPK    +VSLKNQIRS ERMLRK LP EVR
Sbjct: 1   MAHGGYGNRRVAERKHHVGRRSKGLGVDKKPKPKPKAVSLKNQIRSTERMLRKELPPEVR 60

Query: 282 DAQEKKLEGLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQ 341
           +AQEKKLEGL+KQQEIH+RLA+ERKIFLRD                     QR  SGQ Q
Sbjct: 61  EAQEKKLEGLKKQQEIHTRLALERKIFLRDRKIKFFERRKIERGIRRLEKLQRGSSGQPQ 120

Query: 342 DSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAAS 401
           D+++A+QLSKLKEDLEYVRFFPKTEKYV+LFTG +DSDMVDRR +LR+QIKANLIAAAAS
Sbjct: 121 DAEIAEQLSKLKEDLEYVRFFPKTEKYVSLFTGGEDSDMVDRRNRLRKQIKANLIAAAAS 180

Query: 402 GKDLEETGSEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSS 461
           GKD+EETGSEDDGLLD+SEDDFFL G           WTDKSTREQASSTSGKAASGMSS
Sbjct: 181 GKDMEETGSEDDGLLDLSEDDFFLTGTSSDEANADDEWTDKSTREQASSTSGKAASGMSS 240

Query: 462 DEK 521
           DE+
Sbjct: 241 DER 243

Query: 522  581
           
Sbjct: 301  243

Query: 582  641
           
Sbjct: 361  243

Query: 642  701
           
Sbjct: 421  243

Query: 702  761
           
Sbjct: 481  243

Query: 762  821
           
Sbjct: 541  243

Query: 822  881
           
Sbjct: 601  243

Query: 882  927
           
Sbjct: 661  243

[Close]

BLAST of MU44657 vs. TAIR10
Match: AT1G04230.1 (AT1G04230.1 Protein of unknown function (DUF2361))

HSP 1 Score: 263.8 bits (673), Expect = 1.3e-70
Identity = 142/242 (58.68%), Postives = 170/242 (70.25%), Query Frame = 3


Query: 222 MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDA 281
           MAHGGY +RRV         +RRSKGL VEKKPK+ SLKNQIRS  RM+RK+LP EVR+A
Sbjct: 1   MAHGGYARRRVAERKTTAGTSRRSKGLRVEKKPKNSSLKNQIRSIGRMIRKDLPPEVREA 60

Query: 282 QEKKLEGLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQF-QD 341
            EKKL+ L+KQQ+IH RLA ERKIFLR+                      R+ SG + QD
Sbjct: 61  LEKKLDDLKKQQDIHFRLAFERKIFLRNRKVRFFERRKIERSIRRLEKLHRSTSGGYVQD 120

Query: 342 SDVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASG 401
           +++  QL++LKEDLEYVRFFPK EKYV+LF+GSDD  + +RR KLR+QIKAN+I AAASG
Sbjct: 121 AEIGGQLNRLKEDLEYVRFFPKNEKYVSLFSGSDDLQVSERRSKLRKQIKANIIFAAASG 180

Query: 402 KDLEETGSEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSD 461
           K+LEETGSEDD LLD+S+DDFF+ G           WTDKST+E  SS SG+A S MSSD
Sbjct: 181 KELEETGSEDDALLDLSDDDFFVNGSSSDEADADDEWTDKSTKEPVSSASGRATSSMSSD 240

Query: 462 EK 521
           E+
Sbjct: 241 ER 242

Query: 522  581
           
Sbjct: 301  242

Query: 582  641
           
Sbjct: 361  242

Query: 642  701
           
Sbjct: 421  242

Query: 702  761
           
Sbjct: 481  242

Query: 762  821
           
Sbjct: 541  242

Query: 822  881
           
Sbjct: 601  242

Query: 882  927
           
Sbjct: 661  242

[Close]

BLAST of MU44657 vs. TAIR10
Match: AT5G43720.1 (AT5G43720.1 Protein of unknown function (DUF2361))

HSP 1 Score: 263.5 bits (672), Expect = 1.7e-70
Identity = 140/241 (58.09%), Postives = 171/241 (70.95%), Query Frame = 3


Query: 222 MAHGGYGKRRVNP------AARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDA 281
           MAHGGY KRR +       ++RRSK L VEKKPK+VS+KNQ+RS ER LRK+LP EVR++
Sbjct: 1   MAHGGYAKRRDSEPKQTAGSSRRSKVLRVEKKPKTVSIKNQMRSVERFLRKDLPPEVRES 60

Query: 282 QEKKLEGLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDS 341
             +KLE L+KQQ+ H+RLAVERKIF R+                     QR  S    D 
Sbjct: 61  LVEKLEDLKKQQDAHARLAVERKIFFRNRKIKFFERRKIERSIRRLEKLQRTSSAHVGDV 120

Query: 342 DVADQLSKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGK 401
           D+A+QLSKLKEDLEYVRFFPK EKYV+LFTG++DS+++++R K+R+QIKAN+I AAASGK
Sbjct: 121 DIAEQLSKLKEDLEYVRFFPKNEKYVSLFTGAEDSEVIEKRGKMRQQIKANIIVAAASGK 180

Query: 402 DLEETGSEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDE 461
           +LEETGSEDDGLLD+S+DDFF  G            TDKS +E ASS SG+A SGMSSDE
Sbjct: 181 ELEETGSEDDGLLDLSDDDFFDKGSSSDEADADDELTDKSAKEAASSASGRATSGMSSDE 240

Query: 462 K 521
           +
Sbjct: 241 R 241

Query: 522  581
           
Sbjct: 301  241

Query: 582  641
           
Sbjct: 361  241

Query: 642  701
           
Sbjct: 421  241

Query: 702  761
           
Sbjct: 481  241

Query: 762  821
           
Sbjct: 541  241

Query: 822  881
           
Sbjct: 601  241

Query: 882  927
           
Sbjct: 661  241

[Close]

BLAST of MU44657 vs. NCBI nr
Match: gi|659076274|ref|XP_008438591.1| (PREDICTED: rRNA-processing protein EFG1-like [Cucumis melo])

HSP 1 Score: 372.9 bits (956), Expect = 5.6e-100
Identity = 204/236 (86.44%), Postives = 204/236 (86.44%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
           GLRKQQEIHSRLAVERKIFLRD                     QRAPSGQFQDSDVADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDVADQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEKI 461
           SEDDGLLDMSEDDFFLCG           WTDKSTREQASSTSGKAASGMSSDEKI
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEKI 236

Query: 462  521
           
Sbjct: 241  236

Query: 522  581
           
Sbjct: 301  236

Query: 582  641
           
Sbjct: 361  236

Query: 642  701
           
Sbjct: 421  236

Query: 702  761
           
Sbjct: 481  236

Query: 762  821
           
Sbjct: 541  236

Query: 822  881
           
Sbjct: 601  236

Query: 882  930
           
Sbjct: 661  236

[Close]

BLAST of MU44657 vs. NCBI nr
Match: gi|449432634|ref|XP_004134104.1| (PREDICTED: rRNA-processing protein EFG1 isoform X1 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 1.2e-97
Identity = 200/235 (85.11%), Postives = 201/235 (85.53%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
           GLRKQQEIHSRLAVERKIFLRD                     QRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           SEDDGLLDMSEDDFFLCG           WTDKSTREQASSTSGKAASGMSSDEK
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK 235

Query: 462  521
           
Sbjct: 241  235

Query: 522  581
           
Sbjct: 301  235

Query: 582  641
           
Sbjct: 361  235

Query: 642  701
           
Sbjct: 421  235

Query: 702  761
           
Sbjct: 481  235

Query: 762  821
           
Sbjct: 541  235

Query: 822  881
           
Sbjct: 601  235

Query: 882  927
           
Sbjct: 661  235

[Close]

BLAST of MU44657 vs. NCBI nr
Match: gi|778678331|ref|XP_011650949.1| (PREDICTED: rRNA-processing protein EFG1 isoform X2 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 1.2e-97
Identity = 200/235 (85.11%), Postives = 201/235 (85.53%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRVN AARRSKGL VEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE
Sbjct: 1   MAHGGYGKRRVNLAARRSKGLTVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
           GLRKQQEIHSRLAVERKIFLRD                     QRAPSGQFQDSD+ADQL
Sbjct: 61  GLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQFQDSDIADQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           SEDDGLLDMSEDDFFLCG           WTDKSTREQASSTSGKAASGMSSDEK
Sbjct: 181 SEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDEK 235

Query: 462  521
           
Sbjct: 241  235

Query: 522  581
           
Sbjct: 301  235

Query: 582  641
           
Sbjct: 361  235

Query: 642  701
           
Sbjct: 421  235

Query: 702  761
           
Sbjct: 481  235

Query: 762  821
           
Sbjct: 541  235

Query: 822  881
           
Sbjct: 601  235

Query: 882  927
           
Sbjct: 661  235

[Close]

BLAST of MU44657 vs. NCBI nr
Match: gi|1009175068|ref|XP_015868679.1| (PREDICTED: rRNA-processing protein EFG1-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 317.4 bits (812), Expect = 2.8e-83
Identity = 176/235 (74.89%), Postives = 189/235 (80.43%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRV PA RRSK LAVEKKPKSVSLKNQIRS ERMLRKNLP EVR+AQEKKL+
Sbjct: 1   MAHGGYGKRRVKPAGRRSKALAVEKKPKSVSLKNQIRSTERMLRKNLPPEVREAQEKKLD 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
            LRKQQEI SRLAVERKIFLRD                     QRA SGQ QD++ A+QL
Sbjct: 61  DLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRASSGQAQDAENAEQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYV+LFTG+DDSD++DRR +LREQIKANLIAA ASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVSLFTGNDDSDIIDRRNRLREQIKANLIAAVASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           SEDDGLLD+SEDDFFL G           WTD+STREQASS SGKAASGMSSDE+
Sbjct: 181 SEDDGLLDLSEDDFFLTG-SSSDEDADDEWTDRSTREQASSASGKAASGMSSDER 234

Query: 462  521
           
Sbjct: 241  234

Query: 522  581
           
Sbjct: 301  234

Query: 582  641
           
Sbjct: 361  234

Query: 642  701
           
Sbjct: 421  234

Query: 702  761
           
Sbjct: 481  234

Query: 762  821
           
Sbjct: 541  234

Query: 822  881
           
Sbjct: 601  234

Query: 882  927
           
Sbjct: 661  234

[Close]

BLAST of MU44657 vs. NCBI nr
Match: gi|1009175070|ref|XP_015868680.1| (PREDICTED: rRNA-processing protein EFG1-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 317.4 bits (812), Expect = 2.8e-83
Identity = 176/235 (74.89%), Postives = 189/235 (80.43%), Query Frame = 3


Query: 222 MAHGGYGKRRVNPAARRSKGLAVEKKPKSVSLKNQIRSAERMLRKNLPAEVRDAQEKKLE 281
           MAHGGYGKRRV PA RRSK LAVEKKPKSVSLKNQIRS ERMLRKNLP EVR+AQEKKL+
Sbjct: 1   MAHGGYGKRRVKPAGRRSKALAVEKKPKSVSLKNQIRSTERMLRKNLPPEVREAQEKKLD 60

Query: 282 GLRKQQEIHSRLAVERKIFLRDXXXXXXXXXXXXXXXXXXXXXQRAPSGQFQDSDVADQL 341
            LRKQQEI SRLAVERKIFLRD                     QRA SGQ QD++ A+QL
Sbjct: 61  DLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRASSGQAQDAENAEQL 120

Query: 342 SKLKEDLEYVRFFPKTEKYVALFTGSDDSDMVDRRKKLREQIKANLIAAAASGKDLEETG 401
           SKLKEDLEYVRFFPKTEKYV+LFTG+DDSD++DRR +LREQIKANLIAA ASGKDLEETG
Sbjct: 121 SKLKEDLEYVRFFPKTEKYVSLFTGNDDSDIIDRRNRLREQIKANLIAAVASGKDLEETG 180

Query: 402 SEDDGLLDMSEDDFFLCGXXXXXXXXXXXWTDKSTREQASSTSGKAASGMSSDEK 461
           SEDDGLLD+SEDDFFL G           WTD+STREQASS SGKAASGMSSDE+
Sbjct: 181 SEDDGLLDLSEDDFFLTG-SSSDEDADDEWTDRSTREQASSASGKAASGMSSDER 234

Query: 462  521
           
Sbjct: 241  234

Query: 522  581
           
Sbjct: 301  234

Query: 582  641
           
Sbjct: 361  234

Query: 642  701
           
Sbjct: 421  234

Query: 702  761
           
Sbjct: 481  234

Query: 762  821
           
Sbjct: 541  234

Query: 822  881
           
Sbjct: 601  234

Query: 882  927
           
Sbjct: 661  234

The following BLAST results are available for this feature:

BLAST of MU44657 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7B4_CUCSA	7.1e-102	85.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143600 PE=4 SV=1	[more]
D7T782_VITVI	2.2e-87	73.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g04640 PE=4 SV=...	[more]
A5BK56_VITVI	4.9e-87	72.69	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020767 PE=4 SV=1	[more]
A0A059B2X5_EUCGR	1.2e-85	72.77	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03172 PE=4 SV=1	[more]
B9RTF8_RICCO	6.7e-84	70.37	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0909310 PE=4 SV=1	[more]

BLAST of MU44657 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04230.1	1.3e-70	58.68	Protein of unknown function (DUF2361)	[more]
AT5G43720.1	1.7e-70	58.09	Protein of unknown function (DUF2361)	[more]

BLAST of MU44657 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076274\|ref\|XP_008438591.1\|	5.6e-100	86.44	PREDICTED: rRNA-processing protein EFG1-like [Cucumis melo]	[more]
gi\|449432634\|ref\|XP_004134104.1\|	1.2e-97	85.11	PREDICTED: rRNA-processing protein EFG1 isoform X1 [Cucumis sativus]	[more]
gi\|778678331\|ref\|XP_011650949.1\|	1.2e-97	85.11	PREDICTED: rRNA-processing protein EFG1 isoform X2 [Cucumis sativus]	[more]
gi\|1009175068\|ref\|XP_015868679.1\|	2.8e-83	74.89	PREDICTED: rRNA-processing protein EFG1-like isoform X1 [Ziziphus jujuba]	[more]
gi\|1009175070\|ref\|XP_015868680.1\|	2.8e-83	74.89	PREDICTED: rRNA-processing protein EFG1-like isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR019310	Efg1

Vocabulary: **Biological Process**
Term	Definition
GO:0006364	rRNA processing

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006479	MELO3C006479	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
DEa0005B22	DEa0005B22	EST
PEa0006K19	PEa0006K19	EST
PEa0006M07	PEa0006M07	EST
PEa0009I01	PEa0009I01	EST
PEa0011H06	PEa0011H06	EST
PEa0013N22	PEa0013N22	EST
PEa0015C09	PEa0015C09	EST
TEa0006P14	TEa0006P14	EST
TEa0008O13	TEa0008O13	EST
TEa0009J21	TEa0009J21	EST
TEa0009J22	TEa0009J22	EST
TEa0016E14	TEa0016E14	EST
VEa0003F05	VEa0003F05	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019310	rRNA-processing protein Efg1	PFAM	PF10153	DUF2361	coord: 32..143 score: 4.7
None	No IPR available	PANTHER	PTHR33911	FAMILY NOT NAMED	coord: 1..235 score: 5.7
None	No IPR available	PANTHER	PTHR33911:SF1	RRNA-PROCESSING PROTEIN EFG1	coord: 1..235 score: 5.7