MU44502 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU44502
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	40S ribosomal protein S6
Location	chr6 : 382548 .. 385291 (+)
Sequence length	964

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACCCCTTTATTTGTTTGATATCTTCGGCCGCCACTTCTACAACCTTGAAGATGAAGTTTAATATCGCCAATCCGACTACTGGATGCCAGAAGAAGCTCGAAATCGACGATGATCAGAAACTCCGTGCTTTTTTTGACAAGAGGATCTCCCAGGAGGTCACTGGAGATTCCCTCGGAGAGGAATTCAAGGGCTATGTTTTTAAGATTATGGGAGGTTGTGACAAGCAGGGTTTCCCAATGAAACAGGGAGTTTTGACCCCTGGTCGTGTCCGTCTCTTGCTACACAGAGGAACCCCTTGTTTTCGCGGTTATGGTAGGCGCAATGGAGAACGCAGAAGGAAGTCTGTGCGTGGATGCATTGTGAGCCCTGACCTTTCTGTTCTGAATCTGGTTATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACAGACACTGAGAAACCAAGAATGAGGGGTCCCAAGAGGGCTTCCAAGATTCGCAAACTTTTCAATTTGTCAAAGGAGGACGATGTTCGAAAGTATGTTAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTTAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACTCCACTGACCCTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAAAAGAAGAGAATTGCGAAGGCCAAGTCTGAGGCTGCCGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGCGAGAGTTTAGCAAAGAAGAGATCCAGACTCTCTGCTGCTTCAAAGCCATCCATTGCTGCTGCTTAGTTTTGCTTGCATTGTTGGTGTCAGTGTTCTATTATCTATATATTTGCCATTTTTTTTCTTTCAAGAGTGAATATTTTGCGGCCGCTTAATATGAGATCTGGAACGTTTTGGCAGTTTTGATGTTTGTTAGTCCACATTTTCTTCTTCCCTTTGTTTATGGA

Library


Library category	ESTs
melon SFTP2 library	1
melon VFLP2 library	1
melon HS library	1
melon PS library	1

Homology

[Close]

BLAST of MU44502 vs. Swiss-Prot
Match: RS62_ARATH (40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3)

HSP 1 Score: 368.6 bits (945), Expect = 6.8e-101
Identity = 189/239 (79.08%), Postives = 194/239 (81.17%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQR+RRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. Swiss-Prot
Match: RS6_ASPOF (40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.2e-100
Identity = 189/239 (79.08%), Postives = 193/239 (80.75%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQR+RRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. Swiss-Prot
Match: RS61_ARATH (40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2)

HSP 1 Score: 365.5 bits (937), Expect = 5.8e-100
Identity = 187/239 (78.24%), Postives = 192/239 (80.33%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQR+RRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. Swiss-Prot
Match: RS6_HUMAN (40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-62
Identity = 130/236 (55.08%), Postives = 155/236 (65.68%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV  D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKI
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKR 290
           QRLVTP  LQ                      Y KLLA R+KE +E+R E +AK+R
Sbjct: 181 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232

Query: 291  350
           
Sbjct: 241  232

Query: 351  410
           
Sbjct: 301  232

Query: 411  470
           
Sbjct: 361  232

Query: 471  530
           
Sbjct: 421  232

Query: 531  590
           
Sbjct: 481  232

Query: 591  650
           
Sbjct: 541  232

Query: 651  710
           
Sbjct: 601  232

Query: 711  759
           
Sbjct: 661  232

[Close]

BLAST of MU44502 vs. Swiss-Prot
Match: RS6_MACFA (40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-62
Identity = 130/236 (55.08%), Postives = 155/236 (65.68%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV  D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLT GRVRLLL +G  C+                 CIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCY--RPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKI
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKR 290
           QRLVTP  LQ                      Y KLLA R+KE +E+R E +AK+R
Sbjct: 181 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR 232

Query: 291  350
           
Sbjct: 241  232

Query: 351  410
           
Sbjct: 301  232

Query: 411  470
           
Sbjct: 361  232

Query: 471  530
           
Sbjct: 421  232

Query: 531  590
           
Sbjct: 481  232

Query: 591  650
           
Sbjct: 541  232

Query: 651  710
           
Sbjct: 601  232

Query: 711  759
           
Sbjct: 661  232

[Close]

BLAST of MU44502 vs. TrEMBL
Match: A0A0A0L5R5_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.5e-102
Identity = 198/239 (82.85%), Postives = 198/239 (82.85%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. TrEMBL
Match: B9RJN4_RICCO (40S ribosomal protein S6 OS=Ricinus communis GN=RCOM_1037060 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.3e-102
Identity = 197/239 (82.43%), Postives = 199/239 (83.26%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. TrEMBL
Match: A0A0A0LL90_CUCSA (40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.8e-101
Identity = 195/239 (81.59%), Postives = 199/239 (83.26%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTD+EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDSEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLL+SRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLSSRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. TrEMBL
Match: A9P9D9_POPTR (40S ribosomal protein S6 OS=Populus trichocarpa GN=POPTR_0001s31850g PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.6e-101
Identity = 195/239 (81.59%), Postives = 198/239 (82.85%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEF GYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFNGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLA+RLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARISDKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. TrEMBL
Match: V4SG60_9ROSI (40S ribosomal protein S6 OS=Citrus clementina GN=CICLE_v10026340mg PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.6e-101
Identity = 194/239 (81.17%), Postives = 199/239 (83.26%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRDGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           +DLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 HDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLA+RLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIAEKKQRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. TAIR10
Match: AT5G10360.1 (AT5G10360.1 Ribosomal protein S6e)

HSP 1 Score: 368.6 bits (945), Expect = 3.8e-102
Identity = 189/239 (79.08%), Postives = 194/239 (81.17%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR+FT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQR+RRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. TAIR10
Match: AT4G31700.1 (AT4G31700.1 ribosomal protein S6)

HSP 1 Score: 365.5 bits (937), Expect = 3.3e-101
Identity = 187/239 (78.24%), Postives = 192/239 (80.33%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEV+GD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQR+RRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. NCBI nr
Match: gi|659074845|ref|XP_008437828.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.4e-101
Identity = 199/239 (83.26%), Postives = 199/239 (83.26%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT KSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTIKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. NCBI nr
Match: gi|659088196|ref|XP_008444852.1| (PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 6.8e-101
Identity = 199/239 (83.26%), Postives = 200/239 (83.68%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ         X            YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRGRIAEKXKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. NCBI nr
Match: gi|449431994|ref|XP_004133785.1| (PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 8.9e-101
Identity = 198/239 (82.85%), Postives = 198/239 (82.85%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV GDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVAGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. NCBI nr
Match: gi|255545786|ref|XP_002513953.1| (PREDICTED: 40S ribosomal protein S6 [Ricinus communis])

HSP 1 Score: 374.8 bits (961), Expect = 1.5e-100
Identity = 197/239 (82.43%), Postives = 199/239 (83.26%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

[Close]

BLAST of MU44502 vs. NCBI nr
Match: gi|470127406|ref|XP_004299660.1| (PREDICTED: 40S ribosomal protein S6 [Fragaria vesca subsp. vesca])

HSP 1 Score: 373.2 bits (957), Expect = 4.4e-100
Identity = 195/239 (81.59%), Postives = 199/239 (83.26%), Query Frame = 3


Query: 51  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVTGDSLGEEFKGYVFKIMGGCDKQG 110
           MKFNIANPTTGCQKKLEIDDD KLRAFFDKRISQEV+GD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDHKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 111 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGD 170
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSPDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGD 120

Query: 171 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 230
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFT+K+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTSKTGKKVSKAPKI 180

Query: 231 QRLVTPLTLQXXXXXXXXXXXXXXXXXXXXXXYQKLLASRLKEQRERRSESLAKKRSRL 290
           QRLVTPLTLQ                      YQKLLASRLKEQRERRSESLAKKRSRL
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRVVKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL 239

Query: 291  350
           
Sbjct: 241  239

Query: 351  410
           
Sbjct: 301  239

Query: 411  470
           
Sbjct: 361  239

Query: 471  530
           
Sbjct: 421  239

Query: 531  590
           
Sbjct: 481  239

Query: 591  650
           
Sbjct: 541  239

Query: 651  710
           
Sbjct: 601  239

Query: 711  768
           
Sbjct: 661  239

The following BLAST results are available for this feature:

BLAST of MU44502 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS62_ARATH	6.8e-101	79.08	40S ribosomal protein S6-2 OS=Arabidopsis thaliana GN=RPS6B PE=1 SV=3	[more]
RS6_ASPOF	1.2e-100	79.08	40S ribosomal protein S6 OS=Asparagus officinalis GN=rps6 PE=2 SV=1	[more]
RS61_ARATH	5.8e-100	78.24	40S ribosomal protein S6-1 OS=Arabidopsis thaliana GN=RPS6A PE=1 SV=2	[more]
RS6_HUMAN	1.3e-62	55.08	40S ribosomal protein S6 OS=Homo sapiens GN=RPS6 PE=1 SV=1	[more]
RS6_MACFA	1.3e-62	55.08	40S ribosomal protein S6 OS=Macaca fascicularis GN=RPS6 PE=2 SV=1	[more]

BLAST of MU44502 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5R5_CUCSA	2.5e-102	82.85	40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_3G118140 PE=3 SV=1	[more]
B9RJN4_RICCO	4.3e-102	82.43	40S ribosomal protein S6 OS=Ricinus communis GN=RCOM_1037060 PE=3 SV=1	[more]
A0A0A0LL90_CUCSA	2.8e-101	81.59	40S ribosomal protein S6 OS=Cucumis sativus GN=Csa_2G369060 PE=3 SV=1	[more]
A9P9D9_POPTR	3.6e-101	81.59	40S ribosomal protein S6 OS=Populus trichocarpa GN=POPTR_0001s31850g PE=2 SV=1	[more]
V4SG60_9ROSI	3.6e-101	81.17	40S ribosomal protein S6 OS=Citrus clementina GN=CICLE_v10026340mg PE=3 SV=1	[more]

BLAST of MU44502 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10360.1	3.8e-102	79.08	Ribosomal protein S6e	[more]
AT4G31700.1	3.3e-101	78.24	ribosomal protein S6	[more]

BLAST of MU44502 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074845\|ref\|XP_008437828.1\|	1.4e-101	83.26	PREDICTED: 40S ribosomal protein S6-like [Cucumis melo]	[more]
gi\|659088196\|ref\|XP_008444852.1\|	6.8e-101	83.26	PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Cucumis melo]	[more]
gi\|449431994\|ref\|XP_004133785.1\|	8.9e-101	82.85	PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus]	[more]
gi\|255545786\|ref\|XP_002513953.1\|	1.5e-100	82.43	PREDICTED: 40S ribosomal protein S6 [Ricinus communis]	[more]
gi\|470127406\|ref\|XP_004299660.1\|	4.4e-100	81.59	PREDICTED: 40S ribosomal protein S6 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001377	Ribosomal_S6e
IPR014401	Ribosomal_S6_euk
IPR018282	Ribosomal_S6e_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C005983	MELO3C005983	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AA9YH09FM1	AA9YH09FM1	EST
GA26YJ14FM1	GA26YJ14FM1	EST
HS17G02	HS17G02	EST
PS41A06	PS41A06	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 19..260 score: 1.1E
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 18..145 score: 9.5
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 18..145 score: 1.1
IPR014401	Ribosomal protein S6, eukaryotic	PIR	PIRSF002129	RPS6e	coord: 18..266 score: 4.4E
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 69..80 scor
None	No IPR available	unknown	Coil	Coil	coord: 206..233 scor
None	No IPR available	PANTHER	PTHR11502:SF10	SUBFAMILY NOT NAMED	coord: 19..260 score: 1.1E