MU44069 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU44069
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	H/ACA ribonucleoprotein complex subunit 1-like protein 2
Location	chr8 : 24673402 .. 24675344 (-)
Sequence length	829

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGCGAGAATTTTGCAATGAGCCTCCGGTAAACAAAAGCTCACTCCTTTTCTCCTTTCCCCACATCAAGAGCATAAGAATGAGACCTCCAAGAGGCGGCGGCGGCTTCAGGGGAGGCCGTGATGGTGGTAGAGGAGGTGGACGTGGCGGCGGTGGCAGGGGAGGTGGCCGCTTTGGTGGTCGTGGAGGCGGAGGCTTCCGTGACGAGGGTCCTCCATCTGAAGTCGTTGAGGTTTCTACTTTTCTTCATGCATGTGAGGGAGATGCAGTCACAAAGCTCACAAATGAGAAGATTCCTTTCTTTAATGCCCCTATTTATCTTCAGAACAAGACTCAGATAGGGAAAGTGGATGAAATTTTCGGCCCCATCAATGAATCTTACTTCTCGATCAAAATGATGGAAGGAATTGTCGCAACCTCTTACGCTTCTGGGGATAAATTTTATATTGATCCTGCTAAACTCCTACCACTTGCTAGATTTCTTCCACAACCGAAGGGACAGTTTCCCTCTAGAGGCGGAGGTCGTGGAGGGGGCAGAGGTGGTGGCAGAGGTGGCCGTGGGGGTGGTGGCTTTCGTGGAAGAGGTGGCCCAAGAGGTGGCAGAGGTGGCCCTCCAAGAGGTGGTGGCCGTGGTGGTGGCTTTAGGGGGAGAGGAAGATTCTAGATTAGCATTATGTAATATCATAGGTTTACCAATTTTCGATTTGAAATGTTGTTTTGAGAAGCGTTTGCAAGAGTCTTTTGTTTGTACTGTATTTTATTTGGAATTGAACCTCTTGGTATTGAAGCTACTACCTGATTTAAGTCTCCTCCAAATTTTAACTTTTTACT

Library


Library category	ESTs
melon SFTP2 library	2
melon PFLP2 library	1
melon DFLP2 library	2
melon VFLP2 library	10
melon PFTP2 library	1

Homology

[Close]

BLAST of MU44069 vs. Swiss-Prot
Match: NLAL1_ARATH (Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Arabidopsis thaliana GN=At3g03920 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-45
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEV+TF+HACEGDAVTKL+ EKIP FNAPIYL+NKTQIGKVDEIFGPINES F
Sbjct: 52  EGPPSEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLF 111

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKMMEGIVATSY+ GDKF+IDP KLLPLARFLPQPKGQ
Sbjct: 112 SIKMMEGIVATSYSPGDKFFIDPYKLLPLARFLPQPKGQ 150

Query: 324  383
           
Sbjct: 172  150

Query: 384  443
           
Sbjct: 232  150

Query: 444  501
           
Sbjct: 292  150

[Close]

BLAST of MU44069 vs. Swiss-Prot
Match: NLAL2_ARATH (H/ACA ribonucleoprotein complex subunit 1-like protein 2 OS=Arabidopsis thaliana GN=At5g18180 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.3e-43
Identity = 85/99 (85.86%), Postives = 89/99 (89.90%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEV+TFLHACEGDAV KL+N KIP FNAPIYLQNKTQIG+VDEIFGPINES F
Sbjct: 39  EGPPSEVVEVATFLHACEGDAVFKLSNVKIPHFNAPIYLQNKTQIGRVDEIFGPINESLF 98

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKM EGIVATSY+ GDKF+I P KLLPL+RFLPQPKGQ
Sbjct: 99  SIKMREGIVATSYSQGDKFFISPEKLLPLSRFLPQPKGQ 137

Query: 324  383
           
Sbjct: 159  137

Query: 384  443
           
Sbjct: 219  137

Query: 444  501
           
Sbjct: 279  137

[Close]

BLAST of MU44069 vs. Swiss-Prot
Match: GAR1_CANGA (H/ACA ribonucleoprotein complex subunit 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=GAR1 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.4e-32
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           +GPP  V+E+  F+H CEGD V +  N K+P+FNAPIYL+NKTQ+GKVDEI GP+NE YF
Sbjct: 32  QGPPDTVLEMGEFMHPCEGDVVCRSINTKVPYFNAPIYLENKTQVGKVDEILGPLNEVYF 91

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPK 323
           +IK  EG+ ATS+  GDKFYI P KLLP+ RF+P+PK
Sbjct: 92  TIKCGEGVQATSFKEGDKFYIAPDKLLPIERFIPKPK 128

Query: 324  383
           
Sbjct: 152  128

Query: 384  443
           
Sbjct: 212  128

Query: 444  495
           
Sbjct: 272  128

[Close]

BLAST of MU44069 vs. Swiss-Prot
Match: GAR1_NEOFI (H/ACA ribonucleoprotein complex subunit 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gar1 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.9e-32
Identity = 63/96 (65.62%), Postives = 76/96 (79.17%), Query Frame = 3


Query: 207 GPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYFS 266
           GPP++V+E+ TF+HACEG+ V +  N KIP+FNAPIYL+NKT IGKVDE+ GPIN+ YF+
Sbjct: 35  GPPAQVLEMGTFMHACEGEMVCESVNPKIPYFNAPIYLENKTPIGKVDEVLGPINQVYFT 94

Query: 267 IKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPK 326
           IK  EGIVATS+  GDK YI   KLLPL +FLP+PK
Sbjct: 95  IKPQEGIVATSFKPGDKVYIGGDKLLPLEKFLPKPK 130

Query: 327  386
           
Sbjct: 155  130

Query: 387  446
           
Sbjct: 215  130

Query: 447  495
           
Sbjct: 275  130

[Close]

BLAST of MU44069 vs. Swiss-Prot
Match: GAR1_KLULA (H/ACA ribonucleoprotein complex subunit 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAR1 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.9e-32
Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           +GPP  V+E+  FLH CEGD V +  N KIP+FNAPIYL+NKTQ+GKVDEI GP+NE +F
Sbjct: 29  QGPPDSVLEMGAFLHPCEGDIVCRSINTKIPYFNAPIYLENKTQVGKVDEILGPLNEVFF 88

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPK 323
           ++K  +G+ A S++ GDKFYI P KLLP+ RFLP+PK
Sbjct: 89  TVKCSDGVKAESFSEGDKFYIAPDKLLPIERFLPKPK 125

Query: 324  383
           
Sbjct: 149  125

Query: 384  443
           
Sbjct: 209  125

Query: 444  495
           
Sbjct: 269  125

[Close]

BLAST of MU44069 vs. TrEMBL
Match: A0A0A0KWF0_CUCSA (H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Cucumis sativus GN=Csa_4G192120 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.9e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF
Sbjct: 43  EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 102

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS 323
           SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS
Sbjct: 103 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS 144

Query: 324  383
           
Sbjct: 163  144

Query: 384  443
           
Sbjct: 223  144

Query: 444  503
           
Sbjct: 283  144

Query: 504  510
           
Sbjct: 343  144

[Close]

BLAST of MU44069 vs. TrEMBL
Match: S8CQP1_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05695 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.2e-48
Identity = 96/99 (96.97%), Postives = 99/99 (100.00%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF
Sbjct: 43  EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 102

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKMMEGIVATSY++G+KFYIDPAKLLPLARFLPQPKGQ
Sbjct: 103 SIKMMEGIVATSYSTGEKFYIDPAKLLPLARFLPQPKGQ 141

Query: 324  383
           
Sbjct: 163  141

Query: 384  443
           
Sbjct: 223  141

Query: 444  501
           
Sbjct: 283  141

[Close]

BLAST of MU44069 vs. TrEMBL
Match: A0A072U1E4_MEDTR (Gar1/Naf1 RNA-binding region protein OS=Medicago truncatula GN=MTR_7g085640 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.4e-47
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTF+HACEGDAVTKLTNEKIPFFNAPIYLQN TQIGKVDEIFGPINESYF
Sbjct: 52  EGPPSEVVEVSTFIHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYF 111

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           S+KMMEGIVATSYA+GDKFYIDP KLLPLARFLPQPKGQ
Sbjct: 112 SVKMMEGIVATSYAAGDKFYIDPRKLLPLARFLPQPKGQ 150

Query: 324  383
           
Sbjct: 172  150

Query: 384  443
           
Sbjct: 232  150

Query: 444  501
           
Sbjct: 292  150

[Close]

BLAST of MU44069 vs. TrEMBL
Match: A0A067L6M8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02724 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.6e-47
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTFLHACEGDAVTKLTNEKIP+FNAPI+LQNKTQIGKVDEIFGPINESYF
Sbjct: 45  EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPYFNAPIFLQNKTQIGKVDEIFGPINESYF 104

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKMMEGIVATSYA+GDKF+IDP KLLPLARFLPQPKGQ
Sbjct: 105 SIKMMEGIVATSYATGDKFFIDPNKLLPLARFLPQPKGQ 143

Query: 324  383
           
Sbjct: 165  143

Query: 384  443
           
Sbjct: 225  143

Query: 444  501
           
Sbjct: 285  143

[Close]

BLAST of MU44069 vs. TrEMBL
Match: A0A061F3J0_THECC (H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Theobroma cacao GN=TCM_026465 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 92/99 (92.93%), Postives = 98/99 (98.99%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPP+EVVE+STFLHACEGDAVTKLTNEKIP+FNAPIYLQNKTQIGKVDEIFGPINESYF
Sbjct: 41  EGPPAEVVEISTFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYF 100

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKM+EGIVATSYA GDKFYIDP+KLLPLA+FLPQPKGQ
Sbjct: 101 SIKMLEGIVATSYALGDKFYIDPSKLLPLAKFLPQPKGQ 139

Query: 324  383
           
Sbjct: 161  139

Query: 384  443
           
Sbjct: 221  139

Query: 444  501
           
Sbjct: 281  139

[Close]

BLAST of MU44069 vs. TAIR10
Match: AT3G03920.1 (AT3G03920.1 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-46
Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEV+TF+HACEGDAVTKL+ EKIP FNAPIYL+NKTQIGKVDEIFGPINES F
Sbjct: 52  EGPPSEVVEVATFVHACEGDAVTKLSQEKIPHFNAPIYLENKTQIGKVDEIFGPINESLF 111

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKMMEGIVATSY+ GDKF+IDP KLLPLARFLPQPKGQ
Sbjct: 112 SIKMMEGIVATSYSPGDKFFIDPYKLLPLARFLPQPKGQ 150

Query: 324  383
           
Sbjct: 172  150

Query: 384  443
           
Sbjct: 232  150

Query: 444  501
           
Sbjct: 292  150

[Close]

BLAST of MU44069 vs. TAIR10
Match: AT5G18180.1 (AT5G18180.1 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-44
Identity = 85/99 (85.86%), Postives = 89/99 (89.90%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEV+TFLHACEGDAV KL+N KIP FNAPIYLQNKTQIG+VDEIFGPINES F
Sbjct: 39  EGPPSEVVEVATFLHACEGDAVFKLSNVKIPHFNAPIYLQNKTQIGRVDEIFGPINESLF 98

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKM EGIVATSY+ GDKF+I P KLLPL+RFLPQPKGQ
Sbjct: 99  SIKMREGIVATSYSQGDKFFISPEKLLPLSRFLPQPKGQ 137

Query: 324  383
           
Sbjct: 159  137

Query: 384  443
           
Sbjct: 219  137

Query: 444  501
           
Sbjct: 279  137

[Close]

BLAST of MU44069 vs. NCBI nr
Match: gi|449459600|ref|XP_004147534.1| (PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF
Sbjct: 43  EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 102

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS 323
           SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS
Sbjct: 103 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS 144

Query: 324  383
           
Sbjct: 163  144

Query: 384  443
           
Sbjct: 223  144

Query: 444  503
           
Sbjct: 283  144

Query: 504  510
           
Sbjct: 343  144

[Close]

BLAST of MU44069 vs. NCBI nr
Match: gi|527202222|gb|EPS69075.1| (hypothetical protein M569_05695, partial [Genlisea aurea])

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 96/99 (96.97%), Postives = 99/99 (100.00%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF
Sbjct: 43  EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 102

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKMMEGIVATSY++G+KFYIDPAKLLPLARFLPQPKGQ
Sbjct: 103 SIKMMEGIVATSYSTGEKFYIDPAKLLPLARFLPQPKGQ 141

Query: 324  383
           
Sbjct: 163  141

Query: 384  443
           
Sbjct: 223  141

Query: 444  501
           
Sbjct: 283  141

[Close]

BLAST of MU44069 vs. NCBI nr
Match: gi|922345165|ref|XP_013449501.1| (Gar1/Naf1 RNA-binding region protein [Medicago truncatula])

HSP 1 Score: 199.5 bits (506), Expect = 7.5e-48
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTF+HACEGDAVTKLTNEKIPFFNAPIYLQN TQIGKVDEIFGPINESYF
Sbjct: 52  EGPPSEVVEVSTFIHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYF 111

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           S+KMMEGIVATSYA+GDKFYIDP KLLPLARFLPQPKGQ
Sbjct: 112 SVKMMEGIVATSYAAGDKFYIDPRKLLPLARFLPQPKGQ 150

Query: 324  383
           
Sbjct: 172  150

Query: 384  443
           
Sbjct: 232  150

Query: 444  501
           
Sbjct: 292  150

[Close]

BLAST of MU44069 vs. NCBI nr
Match: gi|729424531|ref|XP_010558722.1| (PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Tarenaya hassleriana])

HSP 1 Score: 199.1 bits (505), Expect = 9.8e-48
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEV+EVSTFLHACEGDAVTKLTNEKIP+FNAPIYLQNKTQIGKVDEIFGPINES F
Sbjct: 42  EGPPSEVIEVSTFLHACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESLF 101

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 323
           SIKMMEGIVATSY++GDKFYIDPAKLLPLARFLPQPKGQ
Sbjct: 102 SIKMMEGIVATSYSTGDKFYIDPAKLLPLARFLPQPKGQ 140

Query: 324  383
           
Sbjct: 162  140

Query: 384  443
           
Sbjct: 222  140

Query: 444  501
           
Sbjct: 282  140

[Close]

BLAST of MU44069 vs. NCBI nr
Match: gi|470104454|ref|XP_004288618.1| (PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 93/102 (91.18%), Postives = 100/102 (98.04%), Query Frame = 3


Query: 204 EGPPSEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYF 263
           EGPPSEVVEVSTF+HACEGDAVTKLT+EKIP+FNAPIYLQNKTQIGKVDEIFGPINESYF
Sbjct: 39  EGPPSEVVEVSTFVHACEGDAVTKLTHEKIPYFNAPIYLQNKTQIGKVDEIFGPINESYF 98

Query: 264 SIKMMEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQFPS 323
           S+K+MEGIVATSY+ GDKFYIDPAKLLPLARFLPQPKGQ P+
Sbjct: 99  SVKVMEGIVATSYSQGDKFYIDPAKLLPLARFLPQPKGQKPA 140

Query: 324  383
           
Sbjct: 159  140

Query: 384  443
           
Sbjct: 219  140

Query: 444  503
           
Sbjct: 279  140

Query: 504  510
           
Sbjct: 339  140

The following BLAST results are available for this feature:

BLAST of MU44069 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLAL1_ARATH	3.5e-45	88.89	Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Arabidopsis...	[more]
NLAL2_ARATH	4.3e-43	85.86	H/ACA ribonucleoprotein complex subunit 1-like protein 2 OS=Arabidopsis thaliana...	[more]
GAR1_CANGA	3.4e-32	62.89	H/ACA ribonucleoprotein complex subunit 1 OS=Candida glabrata (strain ATCC 2001 ...	[more]
GAR1_NEOFI	9.9e-32	65.63	H/ACA ribonucleoprotein complex subunit 1 OS=Neosartorya fischeri (strain ATCC 1...	[more]
GAR1_KLULA	9.9e-32	61.86	H/ACA ribonucleoprotein complex subunit 1 OS=Kluyveromyces lactis (strain ATCC 8...	[more]

BLAST of MU44069 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWF0_CUCSA	3.9e-51	100.00	H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Cucumis sativus GN=C...	[more]
S8CQP1_9LAMI	5.2e-48	96.97	Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05695 PE=4 SV=1	[more]
A0A072U1E4_MEDTR	3.4e-47	94.95	Gar1/Naf1 RNA-binding region protein OS=Medicago truncatula GN=MTR_7g085640 PE=4...	[more]
A0A067L6M8_JATCU	7.6e-47	94.95	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02724 PE=4 SV=1	[more]
A0A061F3J0_THECC	1.3e-46	92.93	H/ACA ribonucleoprotein complex subunit 1-like protein 1 OS=Theobroma cacao GN=T...	[more]

BLAST of MU44069 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03920.1	2.0e-46	88.89	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein	[more]
AT5G18180.1	2.4e-44	85.86	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein	[more]

BLAST of MU44069 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459600\|ref\|XP_004147534.1\|	1.1e-51	100.00	PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Cu...	[more]
gi\|527202222\|gb\|EPS69075.1\|	1.2e-48	96.97	hypothetical protein M569_05695, partial [Genlisea aurea]	[more]
gi\|922345165\|ref\|XP_013449501.1\|	7.5e-48	94.95	Gar1/Naf1 RNA-binding region protein [Medicago truncatula]	[more]
gi\|729424531\|ref\|XP_010558722.1\|	9.8e-48	94.95	PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Ta...	[more]
gi\|470104454\|ref\|XP_004288618.1\|	1.3e-47	91.18	PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 [Fr...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR007504	H/ACA_rnp_Gar1/Naf1
IPR009000	Transl_B-barrel_sf
IPR021154	H/ACA_rnp_Gar1

Vocabulary: **Biological Process**
Term	Definition
GO:0001522	pseudouridine synthesis
GO:0042254	ribosome biogenesis

Vocabulary: **Cellular Component**
Term	Definition
GO:0031429	box H/ACA snoRNP complex

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0031429	box H/ACA snoRNP complex

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C008801	MELO3C008801	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AA4YM02FM1	AA4YM02FM1	EST
AA5YL16FM1	AA5YL16FM1	EST
DA2YF18FM1	DA2YF18FM1	EST
EA3YO11FM1	EA3YO11FM1	EST
EA4YO11FM1	EA4YO11FM1	EST
GA21YC13FM1	GA21YC13FM1	EST
GA26YD13FM1	GA26YD13FM1	EST
GA28YC12FM1	GA28YC12FM1	EST
GA38YD11FM1	GA38YD11FM1	EST
GA3YG10FM1	GA3YG10FM1	EST
GA44YB10FM1	GA44YB10FM1	EST
GA49YI16FM1	GA49YI16FM1	EST
GA8YA18FM1	GA8YA18FM1	EST
GA9YJ04FM1	GA9YJ04FM1	EST
GA9YJ04RM1	GA9YJ04RM1	EST
IA2YM19FM1	IA2YM19FM1	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007504	H/ACA ribonucleoprotein complex, subunit Gar1/Naf1	PFAM	PF04410	Gar1	coord: 41..140 score: 1.3
IPR009000	Translation protein, beta-barrel domain	unknown	SSF50447	Translation proteins	coord: 50..124 score: 1.91
IPR021154	H/ACA ribonucleoprotein complex, subunit Gar1	PRODOM	PD020235		coord: 51..134 score: 4.0
IPR021154	H/ACA ribonucleoprotein complex, subunit Gar1	PANTHER	PTHR23237	NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1	coord: 1..194 score: 2.4
None	No IPR available	GENE3D	G3DSA:2.40.10.230		coord: 44..125 score: 1.8