MU43763 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU43763
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	30S ribosomal protein S9
Location	chr6 : 10536285 .. 10537006 (+)
Sequence length	718

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACCTTTTTCCAACAGATCATATAAAATACAAAAACCTCTCTTATTAACAACTTTCAGTTCGATCACAAACCCTAACTATGGCGGCTCCAATCGAGTCTGTGCAATGCTTCGGCCGGAAGAAGACCGCAGTTGCTGTAACATACTGCAAGCGCGGCCGAGGCTTGATCAAGATCAACGGCTGCCCAATCGAGCTCGTCGAACCTGAGATCTTACGCTTCAAGGCCTACGAACCCATCCTCCTTCTCGGCCGACACCGCTTCTCCGGCGTCGACATGCGAATCAGAGTCAAAGGCGGAGGCCACACCTCACAGATCTACGCTATCCGCCAGAGCATCGCTAAGGCTCTCGTTGCCTTTTACCAGAAGTACGTCGACGAACAGAGCAAGAAGGAGATAAAGGACATTCTCGTTCGCTACGATCGGACTTTGCTCGTCGCTGATCCTAGACGCTGTGAGCCGAAGAAGTTTGGTGGTCGTGGAGCTCGTGCTAGATTCCAGAAATCATATCGTTGATCGAAGTGTTTTAGGCGTCCATGGCCCAAATCGCTTGTTGGTAATATTTATTTTTTTTTTGCTTTTCTGTTCCAATTAACTTCGGTTTCAAATTTTTGATCCGTTTATGATTGTAGTATAAGATTTTTTTGACTCGAGGCTTGAATTTCTGATTCCTGACATAATTGCAATCGAAATGCCGTTTTGGAACATCAAAGTTTTCTTCC

Library


Library category	ESTs
melon SFTP2 library	1
melon MNR09P2 library	2
melon PFLP2 library	1
melon DFLP2 library	2
melon PFTP2 library	1
melon DFTP2 library	2

Homology

[Close]

BLAST of MU43763 vs. Swiss-Prot
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-71
Identity = 135/140 (96.43%), Postives = 135/140 (96.43%), Query Frame = 3


Query: 90  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGV 149
           IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GV
Sbjct: 6   IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGV 65

Query: 150 DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 209
           DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILV YDRTLLVADPRR
Sbjct: 66  DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVGYDRTLLVADPRR 125

Query: 210 CEPKKFGGRGARARFQKSYR 269
           CEPKKFGGRGARARFQKSYR
Sbjct: 126 CEPKKFGGRGARARFQKSYR 145

Query: 270  329
           
Sbjct: 186  145

Query: 330  389
           
Sbjct: 246  145

Query: 390  449
           
Sbjct: 306  145

Query: 450  509
           
Sbjct: 366  145

[Close]

BLAST of MU43763 vs. Swiss-Prot
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.5e-68
Identity = 128/145 (88.28%), Postives = 137/145 (94.48%), Query Frame = 3


Query: 78  MAAPI-ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRH 137
           MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRH
Sbjct: 1   MATPATESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRH 60

Query: 138 RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLV 197
           RF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKYVDEQ+KKE+KDIL+RYDRTLLV
Sbjct: 61  RFVGVDMRIRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEVKDILMRYDRTLLV 120

Query: 198 ADPRRCEPKKFGGRGARARFQKSYR 257
           ADPRRCEPKKFGGRGAR+RFQKSYR
Sbjct: 121 ADPRRCEPKKFGGRGARSRFQKSYR 145

Query: 258  317
           
Sbjct: 181  145

Query: 318  377
           
Sbjct: 241  145

Query: 378  437
           
Sbjct: 301  145

Query: 438  497
           
Sbjct: 361  145

Query: 498  510
           
Sbjct: 421  145

[Close]

BLAST of MU43763 vs. Swiss-Prot
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-68
Identity = 124/139 (89.21%), Postives = 133/139 (95.68%), Query Frame = 3


Query: 93  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 152
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67

Query: 153 MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 212
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 213 EPKKFGGRGARARFQKSYR 272
           EPKKFGGRGAR+R+QKSYR
Sbjct: 128 EPKKFGGRGARSRYQKSYR 146

Query: 273  332
           
Sbjct: 188  146

Query: 333  392
           
Sbjct: 248  146

Query: 393  452
           
Sbjct: 308  146

Query: 453  510
           
Sbjct: 368  146

[Close]

BLAST of MU43763 vs. Swiss-Prot
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.3e-68
Identity = 123/139 (88.49%), Postives = 133/139 (95.68%), Query Frame = 3


Query: 93  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 152
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 153 MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 212
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 213 EPKKFGGRGARARFQKSYR 272
           EPKKFGGRGAR+R+QKSYR
Sbjct: 128 EPKKFGGRGARSRYQKSYR 146

Query: 273  332
           
Sbjct: 188  146

Query: 333  392
           
Sbjct: 248  146

Query: 393  452
           
Sbjct: 308  146

Query: 453  510
           
Sbjct: 368  146

[Close]

BLAST of MU43763 vs. Swiss-Prot
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.0e-65
Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 3


Query: 84  APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFS 143
           A +ESVQCFGRKKTAVAVTYC+RGRGLI++   PIELVEPEILR+KA+EP+LLLGR +F+
Sbjct: 2   AAVESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFA 61

Query: 144 GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADP 203
           GVDMRIRVKGGG+TSQIYAIRQSIAKALVA++QKYVDEQSKKEIKD+L+RYDRTLLVADP
Sbjct: 62  GVDMRIRVKGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEIKDVLLRYDRTLLVADP 121

Query: 204 RRCEPKKFGGRGARARFQKSYR 263
           RRCEPKKFGGRGAR+RFQKSYR
Sbjct: 122 RRCEPKKFGGRGARSRFQKSYR 142

Query: 264  323
           
Sbjct: 182  142

Query: 324  383
           
Sbjct: 242  142

Query: 384  443
           
Sbjct: 302  142

Query: 444  503
           
Sbjct: 362  142

Query: 504  510
           
Sbjct: 422  142

[Close]

BLAST of MU43763 vs. TrEMBL
Match: A0A0A0L6F6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202730 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 3


Query: 78  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 137
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 138 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 197
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 198 DPRRCEPKKFGGRGARARFQKSYR 257
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144

Query: 258  317
           
Sbjct: 181  144

Query: 318  377
           
Sbjct: 241  144

Query: 378  437
           
Sbjct: 301  144

Query: 438  497
           
Sbjct: 361  144

Query: 498  510
           
Sbjct: 421  144

[Close]

BLAST of MU43763 vs. TrEMBL
Match: A0A067L229_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00289 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-74
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 3


Query: 81  AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 140
           AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF
Sbjct: 3   AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 62

Query: 141 SGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 200
           +GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 63  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 122

Query: 201 PRRCEPKKFGGRGARARFQKSYR 260
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 123 PRRCEPKKFGGRGARARFQKSYR 145

Query: 261  320
           
Sbjct: 183  145

Query: 321  380
           
Sbjct: 243  145

Query: 381  440
           
Sbjct: 303  145

Query: 441  500
           
Sbjct: 363  145

Query: 501  510
           
Sbjct: 423  145

[Close]

BLAST of MU43763 vs. TrEMBL
Match: I3NMP6_HEVBR (40S ribosomal protein S16A OS=Hevea brasiliensis GN=RPS16A PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-74
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 3


Query: 81  AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 140
           AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF
Sbjct: 5   AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 64

Query: 141 SGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 200
           +GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 65  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 124

Query: 201 PRRCEPKKFGGRGARARFQKSYR 260
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 125 PRRCEPKKFGGRGARARFQKSYR 147

Query: 261  320
           
Sbjct: 185  147

Query: 321  380
           
Sbjct: 245  147

Query: 381  440
           
Sbjct: 305  147

Query: 441  500
           
Sbjct: 365  147

Query: 501  510
           
Sbjct: 425  147

[Close]

BLAST of MU43763 vs. TrEMBL
Match: A0A061ETH8_THECC (Ribosomal protein S5 domain 2-like superfamily protein OS=Theobroma cacao GN=TCM_020568 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.7e-74
Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 3


Query: 78  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 137
           MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILR+KAYEPILLLGRHR
Sbjct: 1   MAAPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRYKAYEPILLLGRHR 60

Query: 138 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 197
           F+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQK+VDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKFVDEQSKKEIKDILVRYDRTLLVA 120

Query: 198 DPRRCEPKKFGGRGARARFQKSYR 257
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144

Query: 258  317
           
Sbjct: 181  144

Query: 318  377
           
Sbjct: 241  144

Query: 378  437
           
Sbjct: 301  144

Query: 438  497
           
Sbjct: 361  144

Query: 498  510
           
Sbjct: 421  144

[Close]

BLAST of MU43763 vs. TrEMBL
Match: A5ASC2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02990 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.7e-74
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 3


Query: 78  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 137
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILR KAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRHKAYEPILLLGRHR 60

Query: 138 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 197
           F+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 198 DPRRCEPKKFGGRGARARFQKSYR 257
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144

Query: 258  317
           
Sbjct: 181  144

Query: 318  377
           
Sbjct: 241  144

Query: 378  437
           
Sbjct: 301  144

Query: 438  497
           
Sbjct: 361  144

Query: 498  510
           
Sbjct: 421  144

[Close]

BLAST of MU43763 vs. TAIR10
Match: AT2G09990.1 (AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 259.6 bits (662), Expect = 1.9e-69
Identity = 124/139 (89.21%), Postives = 133/139 (95.68%), Query Frame = 3


Query: 93  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 152
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVN 67

Query: 153 MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 212
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 213 EPKKFGGRGARARFQKSYR 272
           EPKKFGGRGAR+R+QKSYR
Sbjct: 128 EPKKFGGRGARSRYQKSYR 146

Query: 273  332
           
Sbjct: 188  146

Query: 333  392
           
Sbjct: 248  146

Query: 393  452
           
Sbjct: 308  146

Query: 453  510
           
Sbjct: 368  146

[Close]

BLAST of MU43763 vs. TAIR10
Match: AT5G18380.1 (AT5G18380.1 Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 259.2 bits (661), Expect = 2.4e-69
Identity = 123/139 (88.49%), Postives = 133/139 (95.68%), Query Frame = 3


Query: 93  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 152
           ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+
Sbjct: 8   ESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVN 67

Query: 153 MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 212
           MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRC
Sbjct: 68  MRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 127

Query: 213 EPKKFGGRGARARFQKSYR 272
           EPKKFGGRGAR+R+QKSYR
Sbjct: 128 EPKKFGGRGARSRYQKSYR 146

Query: 273  332
           
Sbjct: 188  146

Query: 333  392
           
Sbjct: 248  146

Query: 393  452
           
Sbjct: 308  146

Query: 453  510
           
Sbjct: 368  146

[Close]

BLAST of MU43763 vs. TAIR10
Match: AT3G04230.1 (AT3G04230.1 Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-65
Identity = 118/139 (84.89%), Postives = 128/139 (92.09%), Query Frame = 3


Query: 93  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVD 152
           ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVD
Sbjct: 8   ESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVD 67

Query: 153 MRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRC 212
           MRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKEIKDIL+RYDRTLLVADPRRC
Sbjct: 68  MRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRC 127

Query: 213 EPKKFGGRGARARFQKSYR 272
           E KKFGG GARARFQKSYR
Sbjct: 128 ESKKFGGPGARARFQKSYR 146

Query: 273  332
           
Sbjct: 188  146

Query: 333  392
           
Sbjct: 248  146

Query: 393  452
           
Sbjct: 308  146

Query: 453  510
           
Sbjct: 368  146

[Close]

BLAST of MU43763 vs. NCBI nr
Match: gi|449438394|ref|XP_004136973.1| (PREDICTED: 40S ribosomal protein S16 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 1.3e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 3


Query: 78  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 137
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 138 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 197
           FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 198 DPRRCEPKKFGGRGARARFQKSYR 257
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144

Query: 258  317
           
Sbjct: 181  144

Query: 318  377
           
Sbjct: 241  144

Query: 378  437
           
Sbjct: 301  144

Query: 438  497
           
Sbjct: 361  144

Query: 498  510
           
Sbjct: 421  144

[Close]

BLAST of MU43763 vs. NCBI nr
Match: gi|802563143|ref|XP_012066736.1| (PREDICTED: 40S ribosomal protein S16 [Jatropha curcas])

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 3


Query: 81  AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 140
           AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF
Sbjct: 3   AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 62

Query: 141 SGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 200
           +GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 63  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 122

Query: 201 PRRCEPKKFGGRGARARFQKSYR 260
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 123 PRRCEPKKFGGRGARARFQKSYR 145

Query: 261  320
           
Sbjct: 183  145

Query: 321  380
           
Sbjct: 243  145

Query: 381  440
           
Sbjct: 303  145

Query: 441  500
           
Sbjct: 363  145

Query: 501  510
           
Sbjct: 423  145

[Close]

BLAST of MU43763 vs. NCBI nr
Match: gi|313586545|gb|ADR71283.1| (40S ribosomal protein S16A [Hevea brasiliensis])

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 3


Query: 81  AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 140
           AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF
Sbjct: 5   AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 64

Query: 141 SGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 200
           +GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 65  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 124

Query: 201 PRRCEPKKFGGRGARARFQKSYR 260
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 125 PRRCEPKKFGGRGARARFQKSYR 147

Query: 261  320
           
Sbjct: 185  147

Query: 321  380
           
Sbjct: 245  147

Query: 381  440
           
Sbjct: 305  147

Query: 441  500
           
Sbjct: 365  147

Query: 501  510
           
Sbjct: 425  147

[Close]

BLAST of MU43763 vs. NCBI nr
Match: gi|225432586|ref|XP_002281350.1| (PREDICTED: 40S ribosomal protein S16 [Vitis vinifera])

HSP 1 Score: 287.3 bits (734), Expect = 2.4e-74
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 3


Query: 78  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 137
           MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILR KAYEPILLLGRHR
Sbjct: 1   MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRHKAYEPILLLGRHR 60

Query: 138 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 197
           F+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 120

Query: 198 DPRRCEPKKFGGRGARARFQKSYR 257
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144

Query: 258  317
           
Sbjct: 181  144

Query: 318  377
           
Sbjct: 241  144

Query: 378  437
           
Sbjct: 301  144

Query: 438  497
           
Sbjct: 361  144

Query: 498  510
           
Sbjct: 421  144

[Close]

BLAST of MU43763 vs. NCBI nr
Match: gi|590657854|ref|XP_007034683.1| (Ribosomal protein S5 domain 2-like superfamily protein [Theobroma cacao])

HSP 1 Score: 287.3 bits (734), Expect = 2.4e-74
Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 3


Query: 78  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 137
           MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILR+KAYEPILLLGRHR
Sbjct: 1   MAAPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRYKAYEPILLLGRHR 60

Query: 138 FSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVA 197
           F+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQK+VDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKFVDEQSKKEIKDILVRYDRTLLVA 120

Query: 198 DPRRCEPKKFGGRGARARFQKSYR 257
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144

Query: 258  317
           
Sbjct: 181  144

Query: 318  377
           
Sbjct: 241  144

Query: 378  437
           
Sbjct: 301  144

Query: 438  497
           
Sbjct: 361  144

Query: 498  510
           
Sbjct: 421  144

The following BLAST results are available for this feature:

BLAST of MU43763 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RS16_GOSHI	1.4e-71	96.43	40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1	[more]
RS16_FRIAG	2.5e-68	88.28	40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1	[more]
RS161_ARATH	3.3e-68	89.21	40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1	[more]
RS163_ARATH	4.3e-68	88.49	40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1	[more]
RS16_TORRU	2.0e-65	85.92	40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1	[more]

BLAST of MU43763 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6F6_CUCSA	2.0e-75	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202730 PE=3 SV=1	[more]
A0A067L229_JATCU	1.7e-74	99.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00289 PE=3 SV=1	[more]
I3NMP6_HEVBR	1.7e-74	99.30	40S ribosomal protein S16A OS=Hevea brasiliensis GN=RPS16A PE=2 SV=1	[more]
A0A061ETH8_THECC	3.7e-74	97.22	Ribosomal protein S5 domain 2-like superfamily protein OS=Theobroma cacao GN=TCM...	[more]
A5ASC2_VITVI	3.7e-74	97.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g02990 PE=3 SV=...	[more]

BLAST of MU43763 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G09990.1	1.9e-69	89.21	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT5G18380.1	2.4e-69	88.49	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT3G04230.1	2.1e-65	84.89	Ribosomal protein S5 domain 2-like superfamily protein	[more]

BLAST of MU43763 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438394\|ref\|XP_004136973.1\|	1.3e-75	100.00	PREDICTED: 40S ribosomal protein S16 [Cucumis sativus]	[more]
gi\|802563143\|ref\|XP_012066736.1\|	1.1e-74	99.30	PREDICTED: 40S ribosomal protein S16 [Jatropha curcas]	[more]
gi\|313586545\|gb\|ADR71283.1\|	1.1e-74	99.30	40S ribosomal protein S16A [Hevea brasiliensis]	[more]
gi\|225432586\|ref\|XP_002281350.1\|	2.4e-74	97.92	PREDICTED: 40S ribosomal protein S16 [Vitis vinifera]	[more]
gi\|590657854\|ref\|XP_007034683.1\|	2.4e-74	97.22	Ribosomal protein S5 domain 2-like superfamily protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000754	Ribosomal_S9
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR020568	Ribosomal_S5_D2-typ_fold
IPR020574	Ribosomal_S9_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C019490	MELO3C019490	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AA9YF20FM1	AA9YF20FM1	EST
CA10YE16FM1	CA10YE16FM1	EST
CA15YK18FM1	CA15YK18FM1	EST
DA4YH09FM1	DA4YH09FM1	EST
EA2YJ18FM1	EA2YJ18FM1	EST
EA9YN16FM1	EA9YN16FM1	EST
IA21YD13FM1	IA21YD13FM1	EST
LA10YE19FM1	LA10YE19FM1	EST
LA8YG05FM1	LA8YG05FM1	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 1..144 score: 2.8E
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 12..144 score: 1.8
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	G3DSA:3.30.230.10		coord: 7..144 score: 2.0
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 7..144 score: 1.25
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 72..90 scor
None	No IPR available	PANTHER	PTHR21569:SF6	SUBFAMILY NOT NAMED	coord: 1..144 score: 2.8E