CU177540 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU177540
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 249265 .. 249424 (-)
Sequence length167
The following sequences are available for this feature:

transcribed_cluster sequence

GTAACTCTGTGGCACTTTGCTGTTTCTTTGTTGTCCTTTTAGTAAGCAAATTTCTTCAAGTGCCATATTCTGTGGCTTCCCACATGGTCCCAAAGGACTTGGACGATCTCGAATCTTACGGTCTCTACTAACCGGCGACCTACCCTTTCGAGGAGAAGAAAGGAATG
BLAST of CU177540 vs. TrEMBL
Match: A0A0A0KWF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000960 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 8.4e-14
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = -3

Query: 19  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEICLLKGQQRNS 78
           FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEE    K Q++ S
Sbjct: 221 FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEFA-SKAQEQQS 268

Query: 79  138
           
Sbjct: 281 268

Query: 139 166
           
Sbjct: 341 268

BLAST of CU177540 vs. TrEMBL
Match: B9GI77_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s30350g PE=4 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 5.6e-10
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -3

Query: 49  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEI 108
           F SSPRKGRSPVSRDRK RDRPSPLGP GKPQ+MA EE+
Sbjct: 114 FPSSPRKGRSPVSRDRKCRDRPSPLGPLGKPQSMACEEL 152

Query: 109 166
           
Sbjct: 174 152

BLAST of CU177540 vs. TrEMBL
Match: B9HMX5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09370g PE=4 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 9.6e-10
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = -3

Query: 49  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEI 108
           F SSPRKGRSPV+RDRK RDRPSPLGP GKPQ+MA EE+
Sbjct: 114 FPSSPRKGRSPVNRDRKFRDRPSPLGPLGKPQSMACEEL 152

Query: 109 166
           
Sbjct: 174 152

BLAST of CU177540 vs. TrEMBL
Match: B9SNC4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0174780 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-08
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = -3

Query: 49  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEI 108
           F  SPRKGRSPV+RDRK RDRPSPLGP GKPQ+M  EE+
Sbjct: 114 FPPSPRKGRSPVNRDRKFRDRPSPLGPLGKPQSMVCEEL 152

Query: 109 166
           
Sbjct: 174 152

BLAST of CU177540 vs. TrEMBL
Match: M5W4S4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007726mg PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.8e-08
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = -3

Query: 52  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEE 111
           F  SPRKGRSPV+R+RK RDRPSPLGP GKPQN+A EE
Sbjct: 114 FPQSPRKGRSPVNRERKFRDRPSPLGPNGKPQNLASEE 151

Query: 112 166
           
Sbjct: 174 151

BLAST of CU177540 vs. NCBI nr
Match: gi|659108776|ref|XP_008454383.1| (PREDICTED: uncharacterized protein LOC103494799 [Cucumis melo])

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-13
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = -3

Query: 19  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEICLLKGQQRNS 78
           FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEE    K Q++ S
Sbjct: 115 FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEFA-SKAQEQQS 162

Query: 79  138
           
Sbjct: 175 162

Query: 139 166
           
Sbjct: 235 162

BLAST of CU177540 vs. NCBI nr
Match: gi|700197619|gb|KGN52777.1| (hypothetical protein Csa_4G000960 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-13
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = -3

Query: 19  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEICLLKGQQRNS 78
           FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEE    K Q++ S
Sbjct: 221 FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEFA-SKAQEQQS 268

Query: 79  138
           
Sbjct: 281 268

Query: 139 166
           
Sbjct: 341 268

BLAST of CU177540 vs. NCBI nr
Match: gi|449469122|ref|XP_004152270.1| (PREDICTED: uncharacterized protein LOC101211126 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-13
Identity = 41/49 (83.67%), Postives = 43/49 (87.76%), Query Frame = -3

Query: 19  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEICLLKGQQRNS 78
           FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEE    K Q++ S
Sbjct: 115 FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEFA-SKAQEQQS 162

Query: 79  138
           
Sbjct: 175 162

Query: 139 166
           
Sbjct: 235 162

BLAST of CU177540 vs. NCBI nr
Match: gi|743858109|ref|XP_011030363.1| (PREDICTED: uncharacterized protein LOC105129827 [Populus euphratica])

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-09
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -3

Query: 49  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEI 108
           F SSPRKGRSPVSRDRK RDRPSPLGP GKPQ+MA EE+
Sbjct: 114 FPSSPRKGRSPVSRDRKCRDRPSPLGPLGKPQSMACEEL 152

Query: 109 166
           
Sbjct: 174 152

BLAST of CU177540 vs. NCBI nr
Match: gi|566151827|ref|XP_002300258.2| (hypothetical protein POPTR_0001s30350g [Populus trichocarpa])

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-09
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = -3

Query: 49  FLSSPRKGRSPVSRDRKIRDRPSPLGPCGKPQNMALEEI 108
           F SSPRKGRSPVSRDRK RDRPSPLGP GKPQ+MA EE+
Sbjct: 114 FPSSPRKGRSPVSRDRKCRDRPSPLGPLGKPQSMACEEL 152

Query: 109 166
           
Sbjct: 174 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KWF9_CUCSA8.4e-1483.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000960 PE=4 SV=1[more]
B9GI77_POPTR5.6e-1084.62Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s30350g PE=4 SV=2[more]
B9HMX5_POPTR9.6e-1082.05Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09370g PE=4 SV=2[more]
B9SNC4_RICCO1.1e-0876.92Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0174780 PE=4 SV=1[more]
M5W4S4_PRUPE1.8e-0878.95Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007726mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659108776|ref|XP_008454383.1|2.1e-1383.67PREDICTED: uncharacterized protein LOC103494799 [Cucumis melo][more]
gi|700197619|gb|KGN52777.1|2.1e-1383.67hypothetical protein Csa_4G000960 [Cucumis sativus][more]
gi|449469122|ref|XP_004152270.1|2.1e-1383.67PREDICTED: uncharacterized protein LOC101211126 [Cucumis sativus][more]
gi|743858109|ref|XP_011030363.1|1.4e-0984.62PREDICTED: uncharacterized protein LOC105129827 [Populus euphratica][more]
gi|566151827|ref|XP_002300258.2|1.4e-0984.62hypothetical protein POPTR_0001s30350g [Populus trichocarpa][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G000960Csa4G000960gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0189575H0189575EST