CU176038 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU176038
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionLeucine-rich repeat protein kinase family protein
LocationChr4 : 8629693 .. 8629823 (+)
Sequence length133
The following sequences are available for this feature:

transcribed_cluster sequence

CTGGGGAACGAAGGCCTTTGCGGGGCGCCACTCAGCATTACGTGTAAGAATTCAATTGGTCCATACAATCAAGTATTTACCTATCACAAGGTCTCATACAAGATCATACTGGCTGTCATCGGTTCCGGTCTGG
BLAST of CU176038 vs. TrEMBL
Match: A0A0A0KWB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166920 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.5e-13
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           LGNEGLCGAPLSITCKNSIGPYNQ + +HKVSYKIILAVIGSGL
Sbjct: 505 LGNEGLCGAPLSITCKNSIGPYNQDY-HHKVSYKIILAVIGSGL 547

Query: 61  120
           
Sbjct: 565 547

Query: 121 133
           
Sbjct: 625 547

BLAST of CU176038 vs. TrEMBL
Match: B9SUE1_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0750120 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.9e-07
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           LGN+GLCG PLS++C NS  P +  + +HKVSY+IILAVIGSGL
Sbjct: 329 LGNKGLCGEPLSLSCGNSYAPGHDNY-HHKVSYRIILAVIGSGL 371

Query: 61  120
           
Sbjct: 389 371

Query: 121 133
           
Sbjct: 449 371

BLAST of CU176038 vs. TrEMBL
Match: A0A0D2RJJ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G092400 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.1e-06
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 1

Query: 4   GNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 63
           GN+GLCG PL+  C NSIG  +Q   +H+VSY+IILAVIGSGL
Sbjct: 503 GNKGLCGEPLNFLCANSIGS-DQANYHHRVSYRIILAVIGSGL 544

Query: 64  123
           
Sbjct: 563 544

Query: 124 133
           
Sbjct: 623 544

BLAST of CU176038 vs. TrEMBL
Match: A0A0B0MEW6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_36821 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.8e-06
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1

Query: 4   GNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 63
           GN+GLCG PL+  C NSIG  +QV  +H+VS+++ILAVIGSGL
Sbjct: 503 GNKGLCGEPLNFLCANSIGS-DQVNYHHRVSHRVILAVIGSGL 544

Query: 64  123
           
Sbjct: 563 544

Query: 124 133
           
Sbjct: 623 544

BLAST of CU176038 vs. TrEMBL
Match: A0A068VG20_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004122001 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.8e-06
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 1

Query: 4   GNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 63
           GN+GLCG PLS +C NS G  N V  +HKVSY+IILAVIGSGL
Sbjct: 504 GNKGLCGEPLSPSCGNSNGSGN-VNYHHKVSYRIILAVIGSGL 545

Query: 64  123
           
Sbjct: 564 545

Query: 124 133
           
Sbjct: 624 545

BLAST of CU176038 vs. NCBI nr
Match: gi|449463364|ref|XP_004149404.1| (PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-13
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           LGNEGLCGAPLSITCKNSIGPYNQ + +HKVSYKIILAVIGSGL
Sbjct: 505 LGNEGLCGAPLSITCKNSIGPYNQDY-HHKVSYKIILAVIGSGL 547

Query: 61  120
           
Sbjct: 565 547

Query: 121 133
           
Sbjct: 625 547

BLAST of CU176038 vs. NCBI nr
Match: gi|659121669|ref|XP_008460767.1| (PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-13
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           LGNEGLCGAPLSITCKNSIGPYNQ + +HKVSYKIIL+VIGSGL
Sbjct: 505 LGNEGLCGAPLSITCKNSIGPYNQDY-HHKVSYKIILSVIGSGL 547

Query: 61  120
           
Sbjct: 565 547

Query: 121 133
           
Sbjct: 625 547

BLAST of CU176038 vs. NCBI nr
Match: gi|223530895|gb|EEF32755.1| (ATP binding protein, putative [Ricinus communis])

HSP 1 Score: 60.8 bits (146), Expect = 6.7e-07
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           LGN+GLCG PLS++C NS  P +  + +HKVSY+IILAVIGSGL
Sbjct: 329 LGNKGLCGEPLSLSCGNSYAPGHDNY-HHKVSYRIILAVIGSGL 371

Query: 61  120
           
Sbjct: 389 371

Query: 121 133
           
Sbjct: 449 371

BLAST of CU176038 vs. NCBI nr
Match: gi|1000945845|ref|XP_015581146.1| (PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Ricinus communis])

HSP 1 Score: 60.8 bits (146), Expect = 6.7e-07
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           LGN+GLCG PLS++C NS  P +  + +HKVSY+IILAVIGSGL
Sbjct: 460 LGNKGLCGEPLSLSCGNSYAPGHDNY-HHKVSYRIILAVIGSGL 502

Query: 61  120
           
Sbjct: 520 502

Query: 121 133
           
Sbjct: 580 502

BLAST of CU176038 vs. NCBI nr
Match: gi|1009161646|ref|XP_015899010.1| (PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Ziziphus jujuba])

HSP 1 Score: 58.9 bits (141), Expect = 2.5e-06
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 1

Query: 1   LGNEGLCGAPLSITCKNSIGPYNQVFTYHKVSYKIILAVIGSGL 60
           +GN+GLCG PL+  C NS GP +Q + +H+VSY+IILAVIGSGL
Sbjct: 502 MGNKGLCGEPLNSLCGNSGGPDHQSY-HHRVSYRIILAVIGSGL 544

Query: 61  120
           
Sbjct: 562 544

Query: 121 133
           
Sbjct: 622 544

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KWB9_CUCSA2.5e-1390.91Uncharacterized protein OS=Cucumis sativus GN=Csa_4G166920 PE=4 SV=1[more]
B9SUE1_RICCO7.9e-0765.91ATP binding protein, putative OS=Ricinus communis GN=RCOM_0750120 PE=4 SV=1[more]
A0A0D2RJJ3_GOSRA5.1e-0665.12Uncharacterized protein OS=Gossypium raimondii GN=B456_003G092400 PE=4 SV=1[more]
A0A0B0MEW6_GOSAR8.8e-0662.79Uncharacterized protein OS=Gossypium arboreum GN=F383_36821 PE=4 SV=1[more]
A0A068VG20_COFCA8.8e-0669.77Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004122001 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449463364|ref|XP_004149404.1|2.1e-1390.91PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [... [more]
gi|659121669|ref|XP_008460767.1|4.8e-1388.64PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [... [more]
gi|223530895|gb|EEF32755.1|6.7e-0765.91ATP binding protein, putative [Ricinus communis][more]
gi|1000945845|ref|XP_015581146.1|6.7e-0765.91PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat receptor-like tyrosine-prote... [more]
gi|1009161646|ref|XP_015899010.1|2.5e-0663.64PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Zizip... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G166920Csa4G166920gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0179781H0179781EST