CU174884 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU174884
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionArmadillo repeat-containing protein 6
LocationChr7 : 5093821 .. 5094262 (+)
Sequence length243
The following sequences are available for this feature:

transcribed_cluster sequence

TGTTATTGCTTCAAGATTTACATAGTACTGAAATATTTCGTAACAGCAATGGACCCAGAATCGTTATGGACATTCTAAATAGTGGAAAGCAAAATGTAAATATCTTATATGGTGGCTTTGCTGTTTGTTGCTGCGGCTGCGACTGCTAATGAGGTTGTTAAAGAAGTATTCATGGAGATGAATATTGATGAGCTTTATTTTGCAAACTCTGAGTACGTATAGGGGAGACTGCATCAATAGCTT
BLAST of CU174884 vs. TrEMBL
Match: A0A0A0K4T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074820 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.5e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 3

Query: 3   LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV 62
           LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV
Sbjct: 148 LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV 188

Query: 63  122
           
Sbjct: 208 188

Query: 123 126
           
Sbjct: 268 188

BLAST of CU174884 vs. TrEMBL
Match: A0A0A0K4T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074820 PE=4 SV=1)

HSP 1 Score: 34.7 bits (78), Expect = 6.5e+01
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = 2

Query: 197 ILQTLSTYRGDCINS 242
           ILQTLSTYRGDCINS
Sbjct: 212 ILQTLSTYRGDCINS 226

BLAST of CU174884 vs. NCBI nr
Match: gi|449438432|ref|XP_004136992.1| (PREDICTED: armadillo repeat-containing protein 6 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 3

Query: 3   LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV 62
           LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV
Sbjct: 148 LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV 188

Query: 63  122
           
Sbjct: 208 188

Query: 123 126
           
Sbjct: 268 188

BLAST of CU174884 vs. NCBI nr
Match: gi|659109856|ref|XP_008454917.1| (PREDICTED: armadillo repeat-containing protein 6 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-13
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 3

Query: 3   LLLQDLHSTEIFRNSNGPRIVMDILNSGKQNVNILYGGFAV 62
           LLLQDLHSTEIFRNSNGP+IVMDILNSGKQNVNILYGGFAV
Sbjct: 148 LLLQDLHSTEIFRNSNGPKIVMDILNSGKQNVNILYGGFAV 188

Query: 63  122
           
Sbjct: 208 188

Query: 123 126
           
Sbjct: 268 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K4T9_CUCSA5.5e-14100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074820 PE=4 SV=1[more]
A0A0A0K4T9_CUCSA6.5e+01100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074820 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449438432|ref|XP_004136992.1|4.6e-14100.00PREDICTED: armadillo repeat-containing protein 6 [Cucumis sativus][more]
gi|659109856|ref|XP_008454917.1|1.0e-1397.56PREDICTED: armadillo repeat-containing protein 6 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G074820Csa7G074820gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0172007H0172007EST