CU174677 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU174677
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14028115 .. 14028351 (+)
Sequence length238
The following sequences are available for this feature:

transcribed_cluster sequence

AATTCAAGTCATCGCCTTCGTCGATCAGTGGAAGGGGAAGGCGGCGAACGATAGAACAAATCAGCCCCATGAATCGACCATAGCTACATTTTTAGCCACATCGAGGCGACCAAGAAAGATAATCTCTGCTACGACGACGAGAGCGATGAACAGAGGCATCGCATTTGACCATTTTTTCTTGGGAGGCATCGGAGTCCCAATGGACACCGGCAACTCCTCGGCGGTGGCCCATGATCGG
BLAST of CU174677 vs. TrEMBL
Match: A0A0A0L6G6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G206320 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.8e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW
Sbjct: 11  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

BLAST of CU174677 vs. TrEMBL
Match: M5VLW9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004581mg PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-12
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           R+  T E LPVS G    PK+KWSN MP F+ALVV+AEI FLG+LD+AKN A+VDSW
Sbjct: 11  RTATTQEGLPVSGGISTAPKRKWSNLMPFFVALVVIAEIAFLGKLDIAKNTALVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

BLAST of CU174677 vs. TrEMBL
Match: A0A059AN64_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01147 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = -2

Query: 67  LPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           LP++ G    PKKKW+N MPLF+ LVV+AEI FLGRLD+AKN A+VDSW
Sbjct: 20  LPIANGNLAAPKKKWTNLMPLFVILVVLAEIAFLGRLDMAKNAALVDSW 68

Query: 127 186
           
Sbjct: 80  68

Query: 187 214
           
Sbjct: 140 68

BLAST of CU174677 vs. TrEMBL
Match: A0A059AP59_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01147 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = -2

Query: 67  LPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           LP++ G    PKKKW+N MPLF+ LVV+AEI FLGRLD+AKN A+VDSW
Sbjct: 20  LPIANGNLAAPKKKWTNLMPLFVILVVLAEIAFLGRLDMAKNAALVDSW 68

Query: 127 186
           
Sbjct: 80  68

Query: 187 214
           
Sbjct: 140 68

BLAST of CU174677 vs. TrEMBL
Match: W9S687_9ROSA (Glycoprotein 3-alpha-L-fucosyltransferase A OS=Morus notabilis GN=L484_027524 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.6e-10
Identity = 41/76 (53.95%), Postives = 48/76 (63.16%), Query Frame = -2

Query: 28  RSWATAEE-----LPVSIG-TPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMV 87
           RSW T        LPVS G +    K+KWSN MP F+ALVV++EI FLGRLD+ KN AMV
Sbjct: 8   RSWRTGTSQEGVYLPVSTGVSAAASKRKWSNLMPFFVALVVISEIAFLGRLDMVKNAAMV 67

Query: 88  DSWG*FVLSFAAFPFH 147
           DSW    L + A P H
Sbjct: 68  DSWA--DLFYRAPPAH 81

Query: 148 207
           
Sbjct: 128 81

Query: 208 238
           
Sbjct: 188 81

BLAST of CU174677 vs. NCBI nr
Match: gi|449446089|ref|XP_004140804.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW
Sbjct: 11  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

BLAST of CU174677 vs. NCBI nr
Match: gi|700202397|gb|KGN57530.1| (hypothetical protein Csa_3G206320 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW
Sbjct: 11  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

BLAST of CU174677 vs. NCBI nr
Match: gi|659112246|ref|XP_008456133.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-21
Identity = 54/57 (94.74%), Postives = 54/57 (94.74%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           RSWATAEELPVS G PMP KKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW
Sbjct: 11  RSWATAEELPVSSGAPMPAKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

BLAST of CU174677 vs. NCBI nr
Match: gi|645262045|ref|XP_008236585.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Prunus mume])

HSP 1 Score: 79.3 bits (194), Expect = 3.3e-12
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           R+  T E LPVS G    PK+KWSN MP F+ALVV+AEI FLG+LD+AKN A+VDSW
Sbjct: 11  RTATTQEGLPVSGGISTAPKRKWSNLMPFFVALVVIAEIAFLGKLDIAKNTALVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

BLAST of CU174677 vs. NCBI nr
Match: gi|595795174|ref|XP_007200973.1| (hypothetical protein PRUPE_ppa004581mg [Prunus persica])

HSP 1 Score: 79.3 bits (194), Expect = 3.3e-12
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = -2

Query: 67  RSWATAEELPVSIGTPMPPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSW 126
           R+  T E LPVS G    PK+KWSN MP F+ALVV+AEI FLG+LD+AKN A+VDSW
Sbjct: 11  RTATTQEGLPVSGGISTAPKRKWSNLMPFFVALVVIAEIAFLGKLDIAKNTALVDSW 67

Query: 127 186
           
Sbjct: 71  67

Query: 187 238
           
Sbjct: 131 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L6G6_CUCSA5.8e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G206320 PE=4 SV=1[more]
M5VLW9_PRUPE1.7e-1264.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004581mg PE=3 SV=1[more]
A0A059AN64_EUCGR1.2e-1067.35Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01147 PE=3 SV=1[more]
A0A059AP59_EUCGR1.2e-1067.35Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01147 PE=3 SV=1[more]
W9S687_9ROSA3.6e-1053.95Glycoprotein 3-alpha-L-fucosyltransferase A OS=Morus notabilis GN=L484_027524 PE... [more]
Match NameE-valueIdentityDescription
gi|449446089|ref|XP_004140804.1|1.1e-23100.00PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A [Cucumis sativus][more]
gi|700202397|gb|KGN57530.1|1.1e-23100.00hypothetical protein Csa_3G206320 [Cucumis sativus][more]
gi|659112246|ref|XP_008456133.1|1.7e-2194.74PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Cucumis melo][more]
gi|645262045|ref|XP_008236585.1|3.3e-1264.91PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Prunus mume][more]
gi|595795174|ref|XP_007200973.1|3.3e-1264.91hypothetical protein PRUPE_ppa004581mg [Prunus persica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G206320Csa3G206320gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0170475H0170475EST