CU173916 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU173916
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionFamily of unknown function (DUF716)
LocationChr4 : 10943272 .. 10943481 (-)
Sequence length209
The following sequences are available for this feature:

transcribed_cluster sequence

GCTCATAATTCTCTCACCTCCCTTCTTCTCTTCCCTTCCAAACTAAAGTTGGTTGCTCTGTTTTTCATTTTTTGGGGTTGGTGTGTGCTCAAAAAACAGAGCAATAATTAGTGATTGATTGATACTATTATGGGAACTTTAGTGGGTCATGTAGCACCCGGGTTTGGCTTCTTCATCATTGGCCTATGGCATCTCTTCAACAACATAAA
BLAST of CU173916 vs. TrEMBL
Match: A0A0A0KX38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280600 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.3e-07
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGFFIIGLWHLFNNI
Sbjct: 1   MGTLVGHVAPGFGFFIIGLWHLFNNI 26

Query: 190 208
           
Sbjct: 61  26

BLAST of CU173916 vs. TrEMBL
Match: A0A164YF89_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017676 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.6e-06
Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGFF+IGLWHLFN+I
Sbjct: 1   MGTLVGHVAPGFGFFVIGLWHLFNHI 26

Query: 190 208
           
Sbjct: 61  26

BLAST of CU173916 vs. NCBI nr
Match: gi|659097747|ref|XP_008449792.1| (PREDICTED: transmembrane protein 45A [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGFFIIGLWHLFNNI
Sbjct: 1   MGTLVGHVAPGFGFFIIGLWHLFNNI 26

Query: 190 208
           
Sbjct: 61  26

BLAST of CU173916 vs. NCBI nr
Match: gi|449448810|ref|XP_004142158.1| (PREDICTED: transmembrane protein 45A-like [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGFFIIGLWHLFNNI
Sbjct: 1   MGTLVGHVAPGFGFFIIGLWHLFNNI 26

Query: 190 208
           
Sbjct: 61  26

BLAST of CU173916 vs. NCBI nr
Match: gi|1021036650|gb|KZM94433.1| (hypothetical protein DCAR_017676 [Daucus carota subsp. sativus])

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-06
Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGFF+IGLWHLFN+I
Sbjct: 1   MGTLVGHVAPGFGFFVIGLWHLFNHI 26

Query: 190 208
           
Sbjct: 61  26

BLAST of CU173916 vs. NCBI nr
Match: gi|1021472482|ref|XP_016196541.1| (PREDICTED: transmembrane protein 45A-like [Arachis ipaensis])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-06
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGF +IGLWHLFNNI
Sbjct: 1   MGTLVGHVAPGFGFLLIGLWHLFNNI 26

Query: 190 208
           
Sbjct: 61  26

BLAST of CU173916 vs. NCBI nr
Match: gi|1012004175|ref|XP_015939688.1| (PREDICTED: transmembrane protein 45B-like [Arachis duranensis])

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-06
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 1

Query: 130 MGTLVGHVAPGFGFFIIGLWHLFNNI 189
           MGTLVGHVAPGFGF +IGLWHLFNNI
Sbjct: 1   MGTLVGHVAPGFGFLLIGLWHLFNNI 26

Query: 190 208
           
Sbjct: 61  26

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KX38_CUCSA7.3e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280600 PE=4 SV=1[more]
A0A164YF89_DAUCA3.6e-0692.31Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017676 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659097747|ref|XP_008449792.1|1.0e-06100.00PREDICTED: transmembrane protein 45A [Cucumis melo][more]
gi|449448810|ref|XP_004142158.1|1.0e-06100.00PREDICTED: transmembrane protein 45A-like [Cucumis sativus][more]
gi|1021036650|gb|KZM94433.1|5.2e-0692.31hypothetical protein DCAR_017676 [Daucus carota subsp. sativus][more]
gi|1021472482|ref|XP_016196541.1|8.9e-0692.31PREDICTED: transmembrane protein 45A-like [Arachis ipaensis][more]
gi|1012004175|ref|XP_015939688.1|8.9e-0692.31PREDICTED: transmembrane protein 45B-like [Arachis duranensis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G280600Csa4G280600gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0164990H0164990EST