CU173229 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU173229
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 17607423 .. 17607642 (+)
Sequence length221
The following sequences are available for this feature:

transcribed_cluster sequence

AGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCTGGGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTGGCCATGGTGAAGGCCGCCGCCAGTCAGGTTTTCTTCCGGGCGCCTTGCTCTT
BLAST of CU173229 vs. TrEMBL
Match: A0A0A0LXY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G497810 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-14
Identity = 46/66 (69.70%), Postives = 46/66 (69.70%), Query Frame = 2

Query: 2   AADGISRRQMYLRSYTFSREDIVVPGTTTQNCFXXXXXXXXXXXXXXXXXXXSRCLAMVK 61
           AADGISRRQMYLRSYTFSREDIVVP TTTQNCF                   SRCLAMVK
Sbjct: 46  AADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRCLAMVK 105

Query: 62  AAASQV 121
           AAASQV
Sbjct: 106 AAASQV 111

Query: 122 181
           
Sbjct: 166 111

Query: 182 200
           
Sbjct: 226 111

BLAST of CU173229 vs. NCBI nr
Match: gi|778665185|ref|XP_011648508.1| (PREDICTED: uncharacterized protein LOC105434501 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-14
Identity = 46/66 (69.70%), Postives = 46/66 (69.70%), Query Frame = 2

Query: 2   AADGISRRQMYLRSYTFSREDIVVPGTTTQNCFXXXXXXXXXXXXXXXXXXXSRCLAMVK 61
           AADGISRRQMYLRSYTFSREDIVVP TTTQNCF                   SRCLAMVK
Sbjct: 46  AADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRCLAMVK 105

Query: 62  AAASQV 121
           AAASQV
Sbjct: 106 AAASQV 111

Query: 122 181
           
Sbjct: 166 111

Query: 182 200
           
Sbjct: 226 111

BLAST of CU173229 vs. NCBI nr
Match: gi|659115478|ref|XP_008457578.1| (PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 5.1e-12
Identity = 41/65 (63.08%), Postives = 43/65 (66.15%), Query Frame = 2

Query: 2   AADGISRRQMYLRSYTFSREDIVVPGTTTQNCFXXXXXXXXXXXXXXXXXXXSRCLAMVK 61
           AA+GISRRQMYLRSYTFSRED VVP TTTQNCF                   SRC AMVK
Sbjct: 46  AAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRCFAMVK 105

Query: 62  AAASQ 121
           AAA+Q
Sbjct: 106 AAATQ 110

Query: 122 181
           
Sbjct: 166 110

Query: 182 197
           
Sbjct: 226 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LXY3_CUCSA2.9e-1469.70Uncharacterized protein OS=Cucumis sativus GN=Csa_1G497810 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778665185|ref|XP_011648508.1|2.5e-1469.70PREDICTED: uncharacterized protein LOC105434501 [Cucumis sativus][more]
gi|659115478|ref|XP_008457578.1|5.1e-1263.08PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G497810Csa1G497810gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0159854H0159854EST