CU172283 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU172283
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionElectron transporter, putative
LocationChr5 : 4414270 .. 4414464 (+)
Sequence length197
The following sequences are available for this feature:

transcribed_cluster sequence

GGGGGAGCGAGGTTTGTGCCATGTTATGGATGTGGAGGGGAGCTGTAAAGTGATAAAAAGGGGACACAAAGGAGAGATGTGGAGCATGCAATGAGAATGGTTTGGCTCACTGCCCTGCCTGTCATTGAAACTATCTTTGATGCCATCATAGAATAATGGAATTTGAATTGCTATTTTTAACTCTTTGGTTTGTTGTT
BLAST of CU172283 vs. TrEMBL
Match: A0A0A0KQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-06
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3

Query: 39  GAVK**KGDTKERCGACNENGLAHCPACH 98
           G+ K  KGDTKERCGACNENGLAHCPACH
Sbjct: 333 GSCKVIKGDTKERCGACNENGLAHCPACH 361

Query: 99  126
           
Sbjct: 393 361

BLAST of CU172283 vs. TrEMBL
Match: A0A0A0KQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 33.9 bits (76), Expect = 9.0e+01
Identity = 15/25 (60.00%), Postives = 16/25 (64.00%), Query Frame = 1

Query: 1   GGARFVPCYGCGGEL*SDKKGTQRR 60
           GGARFVPCY CGG     K  T+ R
Sbjct: 321 GGARFVPCYECGGSCKVIKGDTKER 345

Query: 61  76
           
Sbjct: 381 345

BLAST of CU172283 vs. NCBI nr
Match: gi|449452408|ref|XP_004143951.1| (PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 4.4e-07
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3

Query: 39  GAVK**KGDTKERCGACNENGLAHCPACH 98
           G+ K  KGDTKERCGACNENGLAHCPACH
Sbjct: 333 GSCKVIKGDTKERCGACNENGLAHCPACH 361

Query: 99  126
           
Sbjct: 393 361

BLAST of CU172283 vs. NCBI nr
Match: gi|659074080|ref|XP_008437411.1| (PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo])

HSP 1 Score: 61.2 bits (147), Expect = 7.6e-07
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 3

Query: 39  GAVK**KGDTKERCGACNENGLAHCPACH 98
           G+ K  KGDTKERCGACNENGLAHCPACH
Sbjct: 333 GSRKVIKGDTKERCGACNENGLAHCPACH 361

Query: 99  126
           
Sbjct: 393 361

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KQR0_CUCSA1.2e-0686.21Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1[more]
A0A0A0KQR0_CUCSA9.0e+0160.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449452408|ref|XP_004143951.1|4.4e-0786.21PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus][more]
gi|659074080|ref|XP_008437411.1|7.6e-0786.21PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa5G148770Csa5G148770gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0152797H0152797EST