CU172274 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU172274
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Mitochondrial phosphate carrier protein, putative
Location	Chr1 : 106457 .. 106720 (+)
Sequence length	188

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGTCCTTTGTGCTGTGGTCTCACACCCAGCTGACAATCTTGTCTCTTTTCTAAACAATGCAAAGGGTGCAACTGCCGGGGGTGCTGTCAGGCAGCTAGGTTTATGGGGTCTTTTCACTCGTGGCCTTCCACTTCGGATTGTTATGATTGGAACTCTTACCGGGTCTCAATGGGGAATATATGACGCAT

Library


Library category	ESTs
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU172274 vs. Swiss-Prot
Match: MPCP3_ARATH (Mitochondrial phosphate carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MPT3 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.8e-24
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           V CA+VSHPADNLVSFLNNAKGAT G AV+++G+ GLFTRGLPLRIVMIGTLTG+QWG+Y
Sbjct: 288 VFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGMVGLFTRGLPLRIVMIGTLTGAQWGLY 347

Query: 62  DA 121
           DA
Sbjct: 348 DA 349

Query: 122  181
           
Sbjct: 408  349

Query: 182  188
           
Sbjct: 468  349

[Close]

BLAST of CU172274 vs. Swiss-Prot
Match: MPCP2_ARATH (Mitochondrial phosphate carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MPT2 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.2e-22
Identity = 47/62 (75.81%), Postives = 53/62 (85.48%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           + CA++SHPADNLVSFLNN+KGAT   AV++LGLWG+ TRGLPLRI MIGTLTG+QW IY
Sbjct: 277 IFCAIISHPADNLVSFLNNSKGATVADAVKRLGLWGMLTRGLPLRIFMIGTLTGAQWVIY 336

Query: 62  DA 121
           DA
Sbjct: 337 DA 338

Query: 122  181
           
Sbjct: 397  338

Query: 182  188
           
Sbjct: 457  338

[Close]

BLAST of CU172274 vs. Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-12
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           V CA+VSHPAD +VS LN    ATAGG +++LG  G++ +GL  RI+MIGTLT  QW IY
Sbjct: 253 VFCAIVSHPADTVVSKLNQDSQATAGGILKKLGFAGVW-KGLVPRIIMIGTLTALQWFIY 312

Query: 62  DA 121
           D+
Sbjct: 313 DS 313

Query: 122  181
           
Sbjct: 373  313

Query: 182  188
           
Sbjct: 433  313

[Close]

BLAST of CU172274 vs. Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-12
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           V CA+VSHPAD++VS LN  KG+TA   +++LG  G++ +GL  RI+MIGTLT  QW IY
Sbjct: 270 VFCAIVSHPADSVVSVLNKEKGSTASQVLQRLGFRGVW-KGLFARIIMIGTLTALQWFIY 329

Query: 62  DA 121
           D+
Sbjct: 330 DS 330

Query: 122  181
           
Sbjct: 390  330

Query: 182  188
           
Sbjct: 450  330

[Close]

BLAST of CU172274 vs. Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.4e-12
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           V CA+VSHPAD++VS LN  KG+TA   +++LG  G++ +GL  RI+MIGTLT  QW IY
Sbjct: 269 VFCAIVSHPADSVVSVLNKEKGSTASQVLQRLGFRGVW-KGLFARIIMIGTLTALQWFIY 328

Query: 62  DA 121
           D+
Sbjct: 329 DS 329

Query: 122  181
           
Sbjct: 389  329

Query: 182  188
           
Sbjct: 449  329

[Close]

BLAST of CU172274 vs. TrEMBL
Match: E5GBM3_CUCME (Mitochondrial phosphate transporter OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           VLCAVVSHPADNLVSFLNNAKGATAG AVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY
Sbjct: 257 VLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 316

Query: 62  DA 121
           DA
Sbjct: 317 DA 318

Query: 122  181
           
Sbjct: 377  318

Query: 182  188
           
Sbjct: 437  318

[Close]

BLAST of CU172274 vs. TrEMBL
Match: A0A0A0LR40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000680 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           VLCAVVSHPADNLVSFLNNAKGATAG AVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY
Sbjct: 255 VLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 314

Query: 62  DA 121
           DA
Sbjct: 315 DA 316

Query: 122  181
           
Sbjct: 375  316

Query: 182  188
           
Sbjct: 435  316

[Close]

BLAST of CU172274 vs. TrEMBL
Match: B9RA83_RICCO (Mitochondrial phosphate carrier protein, putative OS=Ricinus communis GN=RCOM_1504210 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.1e-25
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           V CA+VSHPADNLVSFLNNAKGATAG A++QLGLWGLFTRGLPLRIVMIGTLTG+QWGIY
Sbjct: 283 VFCAIVSHPADNLVSFLNNAKGATAGDAIKQLGLWGLFTRGLPLRIVMIGTLTGTQWGIY 342

Query: 62  DA 121
           DA
Sbjct: 343 DA 344

Query: 122  181
           
Sbjct: 403  344

Query: 182  188
           
Sbjct: 463  344

[Close]

BLAST of CU172274 vs. TrEMBL
Match: B9I3Y2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s10690g PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-25
Identity = 55/62 (88.71%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           +LCA+VSHPADNLVSFLN+A+GATAG A+RQLGLWGLFTRGLPLRIVMIGTLTG+QWGIY
Sbjct: 281 ILCAIVSHPADNLVSFLNSARGATAGDAIRQLGLWGLFTRGLPLRIVMIGTLTGAQWGIY 340

Query: 62  DA 121
           DA
Sbjct: 341 DA 342

Query: 122  181
           
Sbjct: 401  342

Query: 182  188
           
Sbjct: 461  342

[Close]

BLAST of CU172274 vs. TrEMBL
Match: A0A022QWZ5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008937mg PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-25
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           VLCAVVSHPADNLVSFLNNAKGAT G AV++LGLWGLFTRGLPLRIVMIGTLTG+QWGIY
Sbjct: 272 VLCAVVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIY 331

Query: 62  DA 121
           DA
Sbjct: 332 DA 333

Query: 122  181
           
Sbjct: 392  333

Query: 182  188
           
Sbjct: 452  333

[Close]

BLAST of CU172274 vs. NCBI nr
Match: gi|449440949|ref|XP_004138246.1| (PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           VLCAVVSHPADNLVSFLNNAKGATAG AVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY
Sbjct: 255 VLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 314

Query: 62  DA 121
           DA
Sbjct: 315 DA 316

Query: 122  181
           
Sbjct: 375  316

Query: 182  188
           
Sbjct: 435  316

[Close]

BLAST of CU172274 vs. NCBI nr
Match: gi|659128818|ref|XP_008464385.1| (PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           VLCAVVSHPADNLVSFLNNAKGATAG AVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY
Sbjct: 257 VLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 316

Query: 62  DA 121
           DA
Sbjct: 317 DA 318

Query: 122  181
           
Sbjct: 377  318

Query: 182  188
           
Sbjct: 437  318

[Close]

BLAST of CU172274 vs. NCBI nr
Match: gi|778655223|ref|XP_011649327.1| (PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 1.4e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           VLCAVVSHPADNLVSFLNNAKGATAG AVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY
Sbjct: 255 VLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 314

Query: 62  DA 121
           DA
Sbjct: 315 DA 316

Query: 122  181
           
Sbjct: 375  316

Query: 182  188
           
Sbjct: 435  316

[Close]

BLAST of CU172274 vs. NCBI nr
Match: gi|255540087|ref|XP_002511108.1| (PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Ricinus communis])

HSP 1 Score: 122.1 bits (305), Expect = 3.4e-25
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           V CA+VSHPADNLVSFLNNAKGATAG A++QLGLWGLFTRGLPLRIVMIGTLTG+QWGIY
Sbjct: 283 VFCAIVSHPADNLVSFLNNAKGATAGDAIKQLGLWGLFTRGLPLRIVMIGTLTGTQWGIY 342

Query: 62  DA 121
           DA
Sbjct: 343 DA 344

Query: 122  181
           
Sbjct: 403  344

Query: 182  188
           
Sbjct: 463  344

[Close]

BLAST of CU172274 vs. NCBI nr
Match: gi|566197822|ref|XP_002318765.2| (hypothetical protein POPTR_0012s10690g [Populus trichocarpa])

HSP 1 Score: 121.3 bits (303), Expect = 5.9e-25
Identity = 55/62 (88.71%), Postives = 61/62 (98.39%), Query Frame = 2


Query: 2   VLCAVVSHPADNLVSFLNNAKGATAGGAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIY 61
           +LCA+VSHPADNLVSFLN+A+GATAG A+RQLGLWGLFTRGLPLRIVMIGTLTG+QWGIY
Sbjct: 281 ILCAIVSHPADNLVSFLNSARGATAGDAIRQLGLWGLFTRGLPLRIVMIGTLTGAQWGIY 340

Query: 62  DA 121
           DA
Sbjct: 341 DA 342

Query: 122  181
           
Sbjct: 401  342

Query: 182  188
           
Sbjct: 461  342

The following BLAST results are available for this feature:

BLAST of CU172274 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MPCP3_ARATH	3.8e-24	82.26	Mitochondrial phosphate carrier protein 3, mitochondrial OS=Arabidopsis thaliana...	[more]
MPCP2_ARATH	1.2e-22	75.81	Mitochondrial phosphate carrier protein 2, mitochondrial OS=Arabidopsis thaliana...	[more]
MPCP_CAEEL	4.4e-12	58.06	Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE...	[more]
MPCP_MOUSE	4.4e-12	56.45	Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1	[more]
MPCP_RAT	4.4e-12	56.45	Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV...	[more]

BLAST of CU172274 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBM3_CUCME	1.3e-26	98.39	Mitochondrial phosphate transporter OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A0A0LR40_CUCSA	1.3e-26	98.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000680 PE=3 SV=1	[more]
B9RA83_RICCO	3.1e-25	90.32	Mitochondrial phosphate carrier protein, putative OS=Ricinus communis GN=RCOM_15...	[more]
B9I3Y2_POPTR	5.3e-25	88.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s10690g PE=3 SV=2	[more]
A0A022QWZ5_ERYGU	5.3e-25	91.94	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a008937mg PE=3 SV=1	[more]

BLAST of CU172274 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440949\|ref\|XP_004138246.1\|	1.4e-26	98.39	PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like isoform...	[more]
gi\|659128818\|ref\|XP_008464385.1\|	1.4e-26	98.39	PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like [Cucumi...	[more]
gi\|778655223\|ref\|XP_011649327.1\|	1.4e-26	98.39	PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like isoform...	[more]
gi\|255540087\|ref\|XP_002511108.1\|	3.4e-25	90.32	PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Ricinus com...	[more]
gi\|566197822\|ref\|XP_002318765.2\|	5.9e-25	88.71	hypothetical protein POPTR_0012s10690g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR023395	Mt_carrier_dom_sf

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G000680	Csa1G000680	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
H0152717	H0152717	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023395	Mitochondrial carrier domain	unknown	SSF103506	Mitochondrial carrier	coord: 2..62 score: 5.6
None	No IPR available	PANTHER	PTHR24089	FAMILY NOT NAMED	coord: 2..63 score: 8.7
None	No IPR available	PANTHER	PTHR24089:SF395	MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 2, MITOCHONDRIAL	coord: 2..63 score: 8.7