CU170435 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU170435
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 16057334 .. 16057553 (+)
Sequence length226
The following sequences are available for this feature:

transcribed_cluster sequence

GTTACACATTAACATTATAATTTATGGATAAAATAGTCAACATAAAAAAACAAAATTTGTCCAAGGAATATACATTGACATAATGAGATTACAGAAACATACAGCTTCAGCATTCCCAAATCTCAATCCGATTAGTCTTAGCCAAAGGTTTTTTCACTGCTGTAACACATGTACAGAAAGCCATCACCATCCTTGTATGAATCGTACACCGTACTCATTAAGCTAG
BLAST of CU170435 vs. Swiss-Prot
Match: ATG8I_ARATH (Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-06
Identity = 22/28 (78.57%), Postives = 24/28 (85.71%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           +LM +VY+SYKD DGF+YMCYSSEKTFG
Sbjct: 88  ALMDSVYESYKDDDGFVYMCYSSEKTFG 115

Query: 201 225
           
Sbjct: 148 115

BLAST of CU170435 vs. Swiss-Prot
Match: ATG8E_ORYSJ (Putative autophagy-related protein 8E OS=Oryza sativa subsp. japonica GN=ATG8E PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 5.6e-06
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = -3

Query: 141 LMSTVYDSYKD-GDGFLYMCYSSEKTFG 200
           LM +VY+SYKD GDGFLY+CYSSEKTFG
Sbjct: 60  LMGSVYESYKDEGDGFLYLCYSSEKTFG 87

Query: 201 222
           
Sbjct: 120 87

BLAST of CU170435 vs. Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 5.6e-06
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = -3

Query: 141 LMSTVYDSYKD-GDGFLYMCYSSEKTFG 200
           LM +VY+SYKD GDGFLY+CYSSEKTFG
Sbjct: 91  LMGSVYESYKDEGDGFLYLCYSSEKTFG 118

Query: 201 222
           
Sbjct: 151 118

BLAST of CU170435 vs. TrEMBL
Match: A0A0A0K6G3_CUCSA (Autophagy-related protein OS=Cucumis sativus GN=Csa_7G419640 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLMSTVYDSYKDGDGFLYMCYSSEKTFG
Sbjct: 91  SLMSTVYDSYKDGDGFLYMCYSSEKTFG 118

Query: 201 225
           
Sbjct: 151 118

BLAST of CU170435 vs. TrEMBL
Match: A0A169WP15_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005728 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-06
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLM TVYDSYKD DGFLYMCYSSEKTFG
Sbjct: 92  SLMETVYDSYKDEDGFLYMCYSSEKTFG 119

Query: 201 225
           
Sbjct: 152 119

BLAST of CU170435 vs. NCBI nr
Match: gi|449436361|ref|XP_004135961.1| (PREDICTED: autophagy-related protein 8i [Cucumis sativus])

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLMSTVYDSYKDGDGFLYMCYSSEKTFG
Sbjct: 91  SLMSTVYDSYKDGDGFLYMCYSSEKTFG 118

Query: 201 225
           
Sbjct: 151 118

BLAST of CU170435 vs. NCBI nr
Match: gi|659122904|ref|XP_008461385.1| (PREDICTED: autophagy-related protein 8i-like [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 6.6e-07
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLMSTVYDSYKD DGFLYMCYSSEKTFG
Sbjct: 91  SLMSTVYDSYKDDDGFLYMCYSSEKTFG 118

Query: 201 225
           
Sbjct: 151 118

BLAST of CU170435 vs. NCBI nr
Match: gi|1021047111|gb|KZN04891.1| (hypothetical protein DCAR_005728 [Daucus carota subsp. sativus])

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-06
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLM TVYDSYKD DGFLYMCYSSEKTFG
Sbjct: 92  SLMETVYDSYKDEDGFLYMCYSSEKTFG 119

Query: 201 225
           
Sbjct: 152 119

BLAST of CU170435 vs. NCBI nr
Match: gi|698529048|ref|XP_009761353.1| (PREDICTED: autophagy-related protein 8i [Nicotiana sylvestris])

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-06
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLM TVYDS+KD DGFLYMCYSSEKTFG
Sbjct: 89  SLMETVYDSFKDKDGFLYMCYSSEKTFG 116

Query: 201 225
           
Sbjct: 149 116

BLAST of CU170435 vs. NCBI nr
Match: gi|694188323|gb|AIS71902.1| (autophagy 8h [Nicotiana tabacum])

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-06
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = -3

Query: 141 SLMSTVYDSYKDGDGFLYMCYSSEKTFG 200
           SLM TVYDS+KD DGFLYMCYSSEKTFG
Sbjct: 89  SLMETVYDSFKDKDGFLYMCYSSEKTFG 116

Query: 201 225
           
Sbjct: 149 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ATG8I_ARATH1.1e-0678.57Autophagy-related protein 8i OS=Arabidopsis thaliana GN=ATG8I PE=1 SV=1[more]
ATG8E_ORYSJ5.6e-0682.14Putative autophagy-related protein 8E OS=Oryza sativa subsp. japonica GN=ATG8E P... [more]
ATG8D_ORYSJ5.6e-0682.14Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0K6G3_CUCSA1.6e-07100.00Autophagy-related protein OS=Cucumis sativus GN=Csa_7G419640 PE=3 SV=1[more]
A0A169WP15_DAUCA3.9e-0692.86Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005728 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449436361|ref|XP_004135961.1|1.0e-07100.00PREDICTED: autophagy-related protein 8i [Cucumis sativus][more]
gi|659122904|ref|XP_008461385.1|6.6e-0796.43PREDICTED: autophagy-related protein 8i-like [Cucumis melo][more]
gi|1021047111|gb|KZN04891.1|2.5e-0692.86hypothetical protein DCAR_005728 [Daucus carota subsp. sativus][more]
gi|698529048|ref|XP_009761353.1|7.3e-0689.29PREDICTED: autophagy-related protein 8i [Nicotiana sylvestris][more]
gi|694188323|gb|AIS71902.1|7.3e-0689.29autophagy 8h [Nicotiana tabacum][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G419640Csa7G419640gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0137769H0137769EST