CU169618 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU169618
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein CYPRO4, putative
LocationChr3 : 14087037 .. 14087245 (+)
Sequence length212
The following sequences are available for this feature:

transcribed_cluster sequence

GGTTCAATTGTTGTTGGATCGATTGATGGGGAAAATAAGGCTGTACTCGAAGACGTCGATGAGACAGGCAAAGACAGCCTTTTCCGGGGCTCGGTTCGCCGATTACTCATGTGGAAGTTACTTATGATGGCAAGTGGATTTTGGGGACTACTGATAGTTATTTGATACTGATCTGTTACTTTTATTCACTGATAAAGATGGCAACACGAAGA
BLAST of CU169618 vs. Swiss-Prot
Match: CYPR4_CYNCA (Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.4e-12
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTD+YLILIC  ++
Sbjct: 319 FPGLGSPITHVDVTYDGKWILGTTDTYLILICSLFT 354

Query: 141 189
           
Sbjct: 379 354


HSP 2 Score: 37.4 bits (85), Expect = 7.9e-02
Identity = 18/27 (66.67%), Postives = 19/27 (70.37%), Query Frame = 2

Query: 8   LLLDRLMGKIRLYSKTSMRQAKTAFSG 67
           +++  L GKIRLYS TSMR AKTAF G
Sbjct: 295 IVVGSLDGKIRLYSTTSMRMAKTAFPG 321

Query: 68  89
           
Sbjct: 355 321

BLAST of CU169618 vs. TrEMBL
Match: A0A022QBT9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002618mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.2e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTDSYLILIC  ++
Sbjct: 476 FPGLGSPITHVDVTYDGKWILGTTDSYLILICSLFT 511

Query: 141 189
           
Sbjct: 536 511

BLAST of CU169618 vs. TrEMBL
Match: A0A022QBT9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002618mg PE=4 SV=1)

HSP 1 Score: 37.4 bits (85), Expect = 8.8e+00
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 2

Query: 8   LLLDRLMGKIRLYSKTSMRQAKTAFSG 67
           +++  L GKIRLYS +SMRQAKTAF G
Sbjct: 452 IVVGSLDGKIRLYSVSSMRQAKTAFPG 478

Query: 68  89
           
Sbjct: 512 478


HSP 2 Score: 72.0 bits (175), Expect = 3.2e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTDSYLILIC  ++
Sbjct: 478 FPGLGSPITHVDVTYDGKWILGTTDSYLILICTLFT 513

Query: 141 189
           
Sbjct: 538 513

BLAST of CU169618 vs. TrEMBL
Match: A0A0A0LAA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207380 PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 7.9e-01
Identity = 19/27 (70.37%), Postives = 23/27 (85.19%), Query Frame = 2

Query: 8   LLLDRLMGKIRLYSKTSMRQAKTAFSG 67
           +++  + GKIRLYSKTSMRQAKTAF G
Sbjct: 454 IVVGSIDGKIRLYSKTSMRQAKTAFPG 480

Query: 68  89
           
Sbjct: 514 480


HSP 2 Score: 72.0 bits (175), Expect = 3.2e-10
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTD+YL+LIC  Y+
Sbjct: 456 FPGLGSPITHVDVTYDGKWILGTTDTYLVLICTLYT 491

Query: 141 189
           
Sbjct: 516 491

BLAST of CU169618 vs. TrEMBL
Match: A0A103YCN5_CYNCS (Vacuolar import/degradation, Vid27-related protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014999 PE=4 SV=1)

HSP 1 Score: 37.7 bits (86), Expect = 6.7e+00
Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 2

Query: 29  GKIRLYSKTSMRQAKTAFSG 88
           GKIRLYS TSMRQAKTAF G
Sbjct: 439 GKIRLYSVTSMRQAKTAFPG 458


HSP 2 Score: 72.0 bits (175), Expect = 3.2e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTD+YLILIC  +S
Sbjct: 459 FPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFS 494

Query: 141 189
           
Sbjct: 519 494

BLAST of CU169618 vs. TrEMBL
Match: A0A067EX52_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047036mg PE=4 SV=1)

HSP 1 Score: 41.6 bits (96), Expect = 4.6e-01
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 2

Query: 8   LLLDRLMGKIRLYSKTSMRQAKTAFSG 67
           +++  L GKIRLYSKTSMRQAKTAF G
Sbjct: 435 IVVGSLDGKIRLYSKTSMRQAKTAFPG 461

Query: 68  89
           
Sbjct: 495 461


HSP 2 Score: 71.6 bits (174), Expect = 4.2e-10
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKW+LGTTD+YLILIC  +S
Sbjct: 477 FPGLGSPITHVDVTYDGKWVLGTTDTYLILICTLFS 512

Query: 141 189
           
Sbjct: 537 512

BLAST of CU169618 vs. NCBI nr
Match: gi|976922036|gb|KVI06650.1| (Vacuolar import/degradation, Vid27-related protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-10
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTD+YL+LIC  Y+
Sbjct: 456 FPGLGSPITHVDVTYDGKWILGTTDTYLVLICTLYT 491

Query: 141 189
           
Sbjct: 516 491

BLAST of CU169618 vs. NCBI nr
Match: gi|449445874|ref|XP_004140697.1| (PREDICTED: protein CYPRO4 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTDSYLILIC  ++
Sbjct: 478 FPGLGSPITHVDVTYDGKWILGTTDSYLILICTLFT 513

Query: 141 189
           
Sbjct: 538 513

BLAST of CU169618 vs. NCBI nr
Match: gi|848904003|ref|XP_012851706.1| (PREDICTED: protein CYPRO4 [Erythranthe guttata])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTDSYLILIC  ++
Sbjct: 476 FPGLGSPITHVDVTYDGKWILGTTDSYLILICSLFT 511

Query: 141 189
           
Sbjct: 536 511

BLAST of CU169618 vs. NCBI nr
Match: gi|568867557|ref|XP_006487103.1| (PREDICTED: protein CYPRO4 [Citrus sinensis])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTD+YLILIC  +S
Sbjct: 459 FPGLGSPITHVDVTYDGKWILGTTDTYLILICTLFS 494

Query: 141 189
           
Sbjct: 519 494

BLAST of CU169618 vs. NCBI nr
Match: gi|659112226|ref|XP_008456123.1| (PREDICTED: protein CYPRO4 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-10
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 3

Query: 81  FPGLGSPITHVEVTYDGKWILGTTDSYLILICYFYS 140
           FPGLGSPITHV+VTYDGKWILGTTDSYLILIC  ++
Sbjct: 482 FPGLGSPITHVDVTYDGKWILGTTDSYLILICTLFT 517

Query: 141 189
           
Sbjct: 542 517

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CYPR4_CYNCA6.4e-1283.33Protein CYPRO4 OS=Cynara cardunculus GN=CYPRO4 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A022QBT9_ERYGU3.2e-1086.11Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002618mg PE=4 SV=1[more]
A0A022QBT9_ERYGU8.8e+0066.67Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002618mg PE=4 SV=1[more]
A0A0A0LAA1_CUCSA7.9e-0170.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207380 PE=4 SV=1[more]
A0A103YCN5_CYNCS6.7e+0090.00Vacuolar import/degradation, Vid27-related protein OS=Cynara cardunculus var. sc... [more]
A0A067EX52_CITSI4.6e-0174.07Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047036mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|976922036|gb|KVI06650.1|6.0e-1083.33Vacuolar import/degradation, Vid27-related protein [Cynara cardunculus var. scol... [more]
gi|449445874|ref|XP_004140697.1|6.0e-1086.11PREDICTED: protein CYPRO4 [Cucumis sativus][more]
gi|848904003|ref|XP_012851706.1|6.0e-1086.11PREDICTED: protein CYPRO4 [Erythranthe guttata][more]
gi|568867557|ref|XP_006487103.1|6.0e-1086.11PREDICTED: protein CYPRO4 [Citrus sinensis][more]
gi|659112226|ref|XP_008456123.1|6.0e-1086.11PREDICTED: protein CYPRO4 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G207380Csa3G207380gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0131183H0131183EST