CU169144 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU169144
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 15296256 .. 15296452 (-)
Sequence length173
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GATTGGAGAAGCAAATTTCAAAACGAAGGGGAGTGGGAAAAGAGAAGCGAATCTGAGGGCAAAGAAATGGTTGAGTTCTCTTCGCTACCGGAGGGAGTAATAGCCAACATCTTGTCACTGACGTCTCCATTGCTGGTACTTTTCATGCGGCGGCCCAGTCTGATGTTGCCTGG
Homology
[Close]
BLAST of CU169144 vs. TrEMBL
Match: A0A0A0LZQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G421910 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.0e-11
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 13  KFQNEGEWEKRSESEGKEMVEFSSLPEGVIANILSLTSPL 72
           +  NE EWEKRSESEGKEMVEFSSLPEGVIANILSLTSPL
Sbjct: 8   QISNEREWEKRSESEGKEMVEFSSLPEGVIANILSLTSPL 47

Query: 73   132
           
Sbjct: 68   47

[Close]
BLAST of CU169144 vs. TrEMBL
Match: A0A0A0LZQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G421910 PE=4 SV=1)

HSP 1 Score: 30.8 bits (68), Expect = 6.7e+02
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 3 

Query: 126 SIAGTFHAAAQSDVAW 174
           +++ TFHAAAQSDVAW
Sbjct: 54  AVSWTFHAAAQSDVAW 69

[Close]
BLAST of CU169144 vs. NCBI nr
Match: gi|700210335|gb|KGN65431.1| (hypothetical protein Csa_1G421910 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-09
Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 1 

Query: 13  KFQNEGEWEKRSESEGKEMVEFSSLPEGVIANILSLTSPL 72
           +  NE EWEKRSESEGKEMVEFSSLPEGVIANILSLTSPL
Sbjct: 8   QISNEREWEKRSESEGKEMVEFSSLPEGVIANILSLTSPL 47

Query: 73   132
           
Sbjct: 68   47

The following BLAST results are available for this feature:
BLAST of CU169144 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZQ3_CUCSA9.0e-1190.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G421910 PE=4 SV=1[more]
A0A0A0LZQ3_CUCSA6.7e+0275.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G421910 PE=4 SV=1[more]
BLAST of CU169144 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210335|gb|KGN65431.1|1.9e-0990.00hypothetical protein Csa_1G421910 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G421910Csa1G421910gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0126956H0126956EST