CU168041 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU168041
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 961421 .. 961592 (+)
Sequence length	173

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATTAGCCAGATATCATGGAATTCCATGAGACAAGGCTTTTCTCTGGTATCCTTTTAAACAAGTCATGAGCCAGTTTCAAACTACCTATCTCAGAAAACCCAGATATCATCATATTCCAAGAAAGGGTATCGGGCTCTGGCATTCTACTGAAAAGATTTGAGGCCTCTTTCATA

Library


Library category	ESTs
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU168041 vs. Swiss-Prot
Match: PPR43_ARATH (Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN=PCMP-A4 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 9.9e-11
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = -2


Query: 5   KEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           +EA  LF  MPE D +SW +MI+GF+++  L+ A   F R+PEKS+VSWN+M+SG
Sbjct: 184 EEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238

Query: 65   124
           
Sbjct: 244  238

Query: 125  170
           
Sbjct: 304  238

HSP 2 Score: 51.2 bits (121), Expect = 4.3e-06
Identity = 21/57 (36.84%), Postives = 39/57 (68.42%), Query Frame = -2


Query: 5   MKEASNLFSRM-PEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++ A  +F+ +  + + ++WN MISG++ IG +  A  LF  +P++++VSWNS+I+G
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAG 371

Query: 65   124
           
Sbjct: 375  371

Query: 125  173
           
Sbjct: 435  371

HSP 3 Score: 43.5 bits (101), Expect = 8.9e-04
Identity = 20/56 (35.71%), Postives = 32/56 (57.14%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++ A  +F ++ +     WN+MISG+ + G+ + A  LF  +PE  +VSW  MI+G
Sbjct: 152 VESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITG 207

Query: 65   124
           
Sbjct: 212  207

Query: 125  173
           
Sbjct: 272  207

HSP 4 Score: 38.9 bits (89), Expect = 2.2e-02
Identity = 19/59 (32.20%), Postives = 32/59 (54.24%), Query Frame = -2


Query: 8   MKEASNLFSRMPEPDTLSWNMMISGFSEIG----SLKLAHDLFKRIPEKSLVSWNSMIS 67
           ++ A   F RMPE   +SWN M+SG+++ G    +L+L +D+ +     +  +W  +IS
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS 272

Query: 68   127
           
Sbjct: 274  272

Query: 128  173
           
Sbjct: 334  272

HSP 5 Score: 36.2 bits (82), Expect = 1.4e-01
Identity = 15/40 (37.50%), Postives = 23/40 (57.50%), Query Frame = -2


Query: 53  MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFK 112
           M  A  LF  MP+ + +SWN +I+G++  G   LA + F+
Sbjct: 347 MSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFE 386

Query: 113  172
           
Sbjct: 407  386

[Close]

BLAST of CU168041 vs. Swiss-Prot
Match: PPR88_ARATH (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.7e-10
Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = -2


Query: 8   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMIS 67
           M++A  LFS MP  D  SWNMM+SG++ +G+++LA   F++ PEK  VSWNS+I+
Sbjct: 328 MEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382

Query: 68   127
           
Sbjct: 388  382

Query: 128  173
           
Sbjct: 448  382

HSP 2 Score: 56.6 bits (135), Expect = 1.0e-07
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++EA  LF  MP  D+ SWN MISG+++   +  A  LF+++PE++ VSW++MI+G
Sbjct: 121 LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITG 176

Query: 65   124
           
Sbjct: 181  176

Query: 125  173
           
Sbjct: 241  176

HSP 3 Score: 53.5 bits (127), Expect = 8.6e-07
Identity = 25/59 (42.37%), Postives = 33/59 (55.93%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKL---AHDLFKRIPEKSLVSWNSMISG 64
           M +A  LF  MP+ D ++WN MISG+   G ++    A  LF  +P +   SWN+MISG
Sbjct: 87  MNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISG 145

Query: 65   124
           
Sbjct: 147  145

Query: 125  173
           
Sbjct: 207  145

HSP 4 Score: 50.8 bits (120), Expect = 5.6e-06
Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = -2


Query: 5   EASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           EA ++F ++   +T++WN MISG+ +   +  A  LF  +P++ +V+WN+MISG
Sbjct: 58  EARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111

Query: 65   124
           
Sbjct: 118  111

Query: 125  167
           
Sbjct: 178  111

HSP 5 Score: 50.8 bits (120), Expect = 5.6e-06
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = -2


Query: 5   LFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           LF +M + DT+SWN MI G+  +  ++ A  LF  +P +   SWN M+SG
Sbjct: 303 LFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSG 352

Query: 65   124
           
Sbjct: 363  352

Query: 125  155
           
Sbjct: 423  352

HSP 6 Score: 42.4 bits (98), Expect = 2.0e-03
Identity = 20/54 (37.04%), Postives = 32/54 (59.26%), Query Frame = -2


Query: 5   EASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           EA  LF +MPE + +SW+ MI+GF + G +  A  LF+++P K      ++++G
Sbjct: 154 EALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAG 207

Query: 65   124
           
Sbjct: 214  207

Query: 125  167
           
Sbjct: 274  207

HSP 7 Score: 30.4 bits (67), Expect = 7.8e+00
Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = -2


Query: 5  GSLKLAHDLFKRIPEKSLVSWNSMISG 64
          G +  A D+F+++  ++ V+WN+MISG
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISG 80

Query: 65  86
          
Sbjct: 114  80

[Close]

BLAST of CU168041 vs. Swiss-Prot
Match: PP394_ARATH (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.4e-09
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           +K+A  LF  MPE + ++WN+M++G+S+ G ++ A +LF +I EK +VSW +MI G
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279

Query: 65   124
           
Sbjct: 284  279

Query: 125  173
           
Sbjct: 344  279

HSP 2 Score: 38.1 bits (87), Expect = 3.8e-02
Identity = 19/56 (33.93%), Postives = 30/56 (53.57%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           +K A   F    +    S N +I+GF + G ++ A ++F +  +K + SWN+MISG
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISG 411

Query: 65   124
           
Sbjct: 416  411

Query: 125  173
           
Sbjct: 476  411

HSP 3 Score: 35.0 bits (79), Expect = 3.2e-01
Identity = 17/48 (35.42%), Postives = 27/48 (56.25%), Query Frame = -2


Query: 29  MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLV 88
           +++A  +F +  + D  SWN MISG+++  S +LA  LF+ +   S V
Sbjct: 387 VEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434

Query: 89   148
           
Sbjct: 447  434

Query: 149  173
           
Sbjct: 507  434

[Close]

BLAST of CU168041 vs. Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 5.4e-09
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = -2


Query: 5   KEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           K A  LF R+PEPD +SWN +I G+ + G + +A  LF+++ EK+ +SW +MISG
Sbjct: 167 KLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISG 221

Query: 65   124
           
Sbjct: 227  221

Query: 125  170
           
Sbjct: 287  221

HSP 2 Score: 46.2 bits (108), Expect = 1.4e-04
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = -2


Query: 5   EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           E D  + N +I+ ++  G+ KLAH LF RIPE   VSWNS+I G
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190

Query: 65   124
           
Sbjct: 207  190

Query: 125  137
           
Sbjct: 267  190

HSP 3 Score: 32.0 bits (71), Expect = 2.7e+00
Identity = 13/42 (30.95%), Postives = 27/42 (64.29%), Query Frame = -2


Query: 5   DTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           D++   ++I  +++ G ++ A ++FK I +KS+ +W ++ISG
Sbjct: 281 DSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322

Query: 65   124
           
Sbjct: 341  322

Query: 125  131
           
Sbjct: 401  322

HSP 4 Score: 30.8 bits (68), Expect = 6.0e+00
Identity = 16/39 (41.03%), Postives = 20/39 (51.28%), Query Frame = -2


Query: 56  MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLF 115
           M  A  LF +M E + +SW  MISG+ +    K A  LF
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235

Query: 116  173
           
Sbjct: 257  235

[Close]

BLAST of CU168041 vs. Swiss-Prot
Match: PP419_ARATH (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.1e-09
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = -2


Query: 5   EASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           +A NLF  MP  D +SWN MISG  E G +  A  LF  +PE+S+VSW +M++G
Sbjct: 84  DALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNG 137

Query: 65   124
           
Sbjct: 144  137

Query: 125  167
           
Sbjct: 204  137

HSP 2 Score: 55.1 bits (131), Expect = 3.0e-07
Identity = 23/54 (42.59%), Postives = 35/54 (64.81%), Query Frame = -2


Query: 5   EASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           +A  LF +MP  DT +WN M+ G+ + G +  A  LFK++P K+++SW +MI G
Sbjct: 146 QAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199

Query: 65   124
           
Sbjct: 206  199

Query: 125  167
           
Sbjct: 266  199

HSP 3 Score: 48.9 bits (115), Expect = 2.1e-05
Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M  A  LF  MPE   +SW  M++G    G +  A  LF ++P K   +WNSM+ G
Sbjct: 113 MNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHG 168

Query: 65   124
           
Sbjct: 173  168

Query: 125  173
           
Sbjct: 233  168

HSP 4 Score: 47.4 bits (111), Expect = 6.2e-05
Identity = 22/54 (40.74%), Postives = 32/54 (59.26%), Query Frame = -2


Query: 5   EASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           EA  +F+++P P    +  MI+G++    L  A +LF  +P + +VSWNSMISG
Sbjct: 53  EAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISG 106

Query: 65   124
           
Sbjct: 113  106

Query: 125  167
           
Sbjct: 173  106

HSP 5 Score: 35.0 bits (79), Expect = 3.2e-01
Identity = 17/44 (38.64%), Postives = 26/44 (59.09%), Query Frame = -2


Query: 5   EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           E D    N ++  +S+ G++  A  +F +I +KS+VSWNS+I G
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG 401

Query: 65   124
           
Sbjct: 418  401

Query: 125  137
           
Sbjct: 478  401

[Close]

BLAST of CU168041 vs. TrEMBL
Match: A0A0A0K1D8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017120 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG
Sbjct: 341 MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 396

Query: 65   124
           
Sbjct: 401  396

Query: 125  173
           
Sbjct: 461  396

[Close]

BLAST of CU168041 vs. TrEMBL
Match: A0A0A0K1D8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017120 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.9e-15
Identity = 49/84 (58.33%), Postives = 50/84 (59.52%), Query Frame = -2


Query: 5   ASNLFSRM-------------------------------PEPDTLSWNMMISGFSEIGSL 64
           A  LF +M                               PEPDTLSWNMMISGFSEIGSL
Sbjct: 313 ARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSL 372

Query: 65  KLAHDLFKRIPEKSLVSWNSMISG 124
           KLAHDLFKRIPEKSLVSWNSMISG
Sbjct: 373 KLAHDLFKRIPEKSLVSWNSMISG 396

Query: 125  164
           
Sbjct: 433  396

HSP 2 Score: 67.4 bits (163), Expect = 6.4e-09
Identity = 26/56 (46.43%), Postives = 43/56 (76.79%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++ A N+F +MPE D +SWN M+SG+++ G +  A +LF  +PE+++VSWN+M+SG
Sbjct: 142 VERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSG 197

Query: 65   124
           
Sbjct: 202  197

Query: 125  173
           
Sbjct: 262  197

HSP 3 Score: 55.8 bits (133), Expect = 1.9e-05
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGS--LKLAHDLFKRIPEKSLVSWNSMISG 64
           M +A  LF  MP  D +SWN+M+SG+   G   ++ A ++F ++PE   VSWN+M+SG
Sbjct: 109 MLKARQLFEEMPNRDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSG 166

Query: 65   124
           
Sbjct: 169  166

Query: 125  173
           
Sbjct: 229  166

HSP 4 Score: 49.3 bits (116), Expect = 1.8e-03
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M +A  LF+ MPE + +SWN M+SG+   G ++ A + FK +P++   S  ++ISG
Sbjct: 173 MDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISG 228

Query: 65   124
           
Sbjct: 233  228

Query: 125  173
           
Sbjct: 293  228

HSP 5 Score: 46.6 bits (109), Expect = 1.2e-02
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           + EA  LF      +T++WN MI+ + +   +  A  LF+ +P + +VSWN M+SG
Sbjct: 78  INEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIVSWNLMLSG 133

Query: 65   124
           
Sbjct: 138  133

Query: 125  173
           
Sbjct: 198  133

HSP 6 Score: 44.7 bits (104), Expect = 4.5e-02
Identity = 23/62 (37.10%), Postives = 33/62 (53.23%), Query Frame = -2


Query: 5   EASNLFSRMP--------EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMI 64
           EA  LF R+P          + +SWN MI  +   G +  A +LF ++ E+   SWN+MI
Sbjct: 273 EARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMI 332

Query: 65  SG 124
           SG
Sbjct: 333 SG 334

Query: 125  167
           
Sbjct: 393  334

HSP 7 Score: 37.0 bits (84), Expect = 9.3e+00
Identity = 17/39 (43.59%), Postives = 25/39 (64.10%), Query Frame = -2


Query: 56  MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLF 115
           +K A +LF R+PE   +SWN MISG+ +    K A ++F
Sbjct: 372 LKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGAMNIF 410

Query: 116  173
           
Sbjct: 432  410

HSP 8 Score: 91.7 bits (226), Expect = 3.2e-16
Identity = 39/56 (69.64%), Postives = 52/56 (92.86%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EASNLF +MP PDTLSWN+MISG+++ GSL+LAHD F+R+P+K+LVSWNS+I+G
Sbjct: 333 MEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAG 388

Query: 65   124
           
Sbjct: 393  388

Query: 125  173
           
Sbjct: 453  388

[Close]

BLAST of CU168041 vs. TrEMBL
Match: B9S5H2_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0976090 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 4.9e-09
Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = -2


Query: 5   ASNLFSRMPE-------------------------------PDTLSWNMMISGFSEIGSL 64
           A  LF +MP+                               PDTLSWN+MISG+++ GSL
Sbjct: 305 ARKLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSL 364

Query: 65  KLAHDLFKRIPEKSLVSWNSMISG 124
           +LAHD F+R+P+K+LVSWNS+I+G
Sbjct: 365 ELAHDFFERMPQKNLVSWNSVIAG 388

Query: 125  164
           
Sbjct: 425  388

HSP 2 Score: 62.4 bits (150), Expect = 2.1e-07
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++E  NLF +MPE   +SWN MISG+++ G +  A  LF  +PEK+ VSWN+M+SG
Sbjct: 128 IEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSG 183

Query: 65   124
           
Sbjct: 188  183

Query: 125  173
           
Sbjct: 248  183

HSP 3 Score: 57.8 bits (138), Expect = 5.1e-06
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M EA  LF+ MPE +++SWN M+SGF + G +  A + FKR+PE+ + S ++++SG
Sbjct: 159 MDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDVTSLSALVSG 214

Query: 65   124
           
Sbjct: 219  214

Query: 125  173
           
Sbjct: 279  214

HSP 4 Score: 55.5 bits (132), Expect = 2.5e-05
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGS---LKLAHDLFKRIPEKSLVSWNSMISG 64
           M +A  LF  MPE D +SWN++ISG+        ++   +LF ++PE+  VSWN+MISG
Sbjct: 94  MTKARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISG 152

Query: 65   124
           
Sbjct: 154  152

Query: 125  173
           
Sbjct: 214  152

HSP 5 Score: 55.1 bits (131), Expect = 3.3e-05
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           + EA  LF ++   +T++WN MISG+ + G +  A  LF  +PE+ +VSWN +ISG
Sbjct: 63  INEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLFDEMPERDVVSWNLIISG 118

Query: 65   124
           
Sbjct: 123  118

Query: 125  173
           
Sbjct: 183  118

HSP 6 Score: 45.8 bits (107), Expect = 2.0e-02
Identity = 24/67 (35.82%), Postives = 36/67 (53.73%), Query Frame = -2


Query: 5   EASNLFSRMP-------------EPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVS 64
           EA NLF ++P             E + +SWN MI  + + G +  A  LF ++P++   S
Sbjct: 260 EAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFS 319

Query: 65  WNSMISG 124
           WN+MISG
Sbjct: 320 WNTMISG 326

Query: 125  167
           
Sbjct: 380  326

HSP 7 Score: 37.0 bits (84), Expect = 9.3e+00
Identity = 21/54 (38.89%), Postives = 29/54 (53.70%), Query Frame = -2


Query: 5   EASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           E SNL+S          N  IS F+  G +  A  LF ++  ++ V+WNSMISG
Sbjct: 43  EDSNLYSS---------NKKISHFTRTGRINEARALFDKLERRNTVTWNSMISG 87

Query: 65   124
           
Sbjct: 103  87

Query: 125  167
           
Sbjct: 163  87

HSP 8 Score: 88.6 bits (218), Expect = 2.7e-15
Identity = 38/56 (67.86%), Postives = 51/56 (91.07%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EASNLF +MP PDTL+WN M+SG+++IG+L+LA D FKR+P+K+LVSWNSMI+G
Sbjct: 332 MEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMPQKNLVSWNSMIAG 387

Query: 65   124
           
Sbjct: 392  387

Query: 125  173
           
Sbjct: 452  387

[Close]

BLAST of CU168041 vs. TrEMBL
Match: V4WDU6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007675mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.3e-08
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = -2


Query: 5   ASNLFSRM-------------------------------PEPDTLSWNMMISGFSEIGSL 64
           A  +F +M                               P PDTL+WN M+SG+++IG+L
Sbjct: 304 AREIFEQMLERDTFSWNTMISGYIHVLDMEEASNLFVKMPHPDTLTWNAMVSGYAQIGNL 363

Query: 65  KLAHDLFKRIPEKSLVSWNSMISG 124
           +LA D FKR+P+K+LVSWNSMI+G
Sbjct: 364 ELALDFFKRMPQKNLVSWNSMIAG 387

Query: 125  164
           
Sbjct: 424  387

HSP 2 Score: 59.7 bits (143), Expect = 1.3e-06
Identity = 26/56 (46.43%), Postives = 41/56 (73.21%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++EA  LF  MPE D ++WN +ISG+++ G ++ A  LF  +P +++VSWN+MISG
Sbjct: 128 LEEARYLFDIMPERDCVTWNTVISGYAKTGEMEEALRLFNSMPARNVVSWNAMISG 183

Query: 65   124
           
Sbjct: 188  183

Query: 125  173
           
Sbjct: 248  183

HSP 3 Score: 55.5 bits (132), Expect = 2.5e-05
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGF---SEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M +A  LF  MP+ D +SWN+MISG+   S  G L+ A  LF  +PE+  V+WN++ISG
Sbjct: 94  MAKARKLFDEMPQRDVVSWNVMISGYISSSGSGFLEEARYLFDIMPERDCVTWNTVISG 152

Query: 65   124
           
Sbjct: 154  152

Query: 125  173
           
Sbjct: 214  152

HSP 4 Score: 50.1 bits (118), Expect = 1.1e-03
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           + EA  +F +  + +T +WN+MISG+ +   +  A  LF  +P++ +VSWN MISG
Sbjct: 63  LTEARAVFDQTEQRNTKTWNVMISGYVKRREMAKARKLFDEMPQRDVVSWNVMISG 118

Query: 65   124
           
Sbjct: 123  118

Query: 125  173
           
Sbjct: 183  118

HSP 5 Score: 49.7 bits (117), Expect = 1.4e-03
Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EA  LF+ MP  + +SWN MISGF + G +  A + F R+P +   S ++++SG
Sbjct: 159 MEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDSASLSALVSG 214

Query: 65   124
           
Sbjct: 219  214

Query: 125  173
           
Sbjct: 279  214

HSP 6 Score: 88.6 bits (218), Expect = 2.7e-15
Identity = 38/56 (67.86%), Postives = 51/56 (91.07%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EASNLF +MP PDTL+WN M+SG+++IG+L+LA D FKR+P+K+LVSWNSMI+G
Sbjct: 249 MEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMPQKNLVSWNSMIAG 304

Query: 65   124
           
Sbjct: 309  304

Query: 125  173
           
Sbjct: 369  304

[Close]

BLAST of CU168041 vs. TrEMBL
Match: A0A067EVV8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036340mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.3e-08
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = -2


Query: 5   ASNLFSRM-------------------------------PEPDTLSWNMMISGFSEIGSL 64
           A  +F +M                               P PDTL+WN M+SG+++IG+L
Sbjct: 221 AREIFEQMLERDTFSWNTMISGYIHVLDMEEASNLFVKMPHPDTLTWNAMVSGYAQIGNL 280

Query: 65  KLAHDLFKRIPEKSLVSWNSMISG 124
           +LA D FKR+P+K+LVSWNSMI+G
Sbjct: 281 ELALDFFKRMPQKNLVSWNSMIAG 304

Query: 125  164
           
Sbjct: 341  304

HSP 2 Score: 59.7 bits (143), Expect = 1.3e-06
Identity = 26/56 (46.43%), Postives = 41/56 (73.21%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           ++EA  LF  MPE D ++WN +ISG+++ G ++ A  LF  +P +++VSWN+MISG
Sbjct: 45  LEEARYLFDIMPERDCVTWNTVISGYAKTGEMEEALRLFNSMPARNVVSWNAMISG 100

Query: 65   124
           
Sbjct: 105  100

Query: 125  173
           
Sbjct: 165  100

HSP 3 Score: 53.9 bits (128), Expect = 7.4e-05
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSE---IGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M +A  LF  MP+ D +SWN+MISG+      G L+ A  LF  +PE+  V+WN++ISG
Sbjct: 11  MAKARKLFDEMPQRDVVSWNVMISGYISSRGSGFLEEARYLFDIMPERDCVTWNTVISG 69

Query: 65   124
           
Sbjct: 71   69

Query: 125  173
           
Sbjct: 131  69

HSP 4 Score: 49.7 bits (117), Expect = 1.4e-03
Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EA  LF+ MP  + +SWN MISGF + G +  A + F R+P +   S ++++SG
Sbjct: 76  MEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDSASLSALVSG 131

Query: 65   124
           
Sbjct: 136  131

Query: 125  173
           
Sbjct: 196  131

HSP 5 Score: 36.2 bits (82), Expect = 1.6e+01
Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = -2


Query: 5   MISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           MISG+ +   +  A  LF  +P++ +VSWN MISG
Sbjct: 1   MISGYVKRREMAKARKLFDEMPQRDVVSWNVMISG 35

Query: 65   110
           
Sbjct: 61   35

HSP 6 Score: 85.5 bits (210), Expect = 2.3e-14
Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M EASNLFS+MP PD L+WN +ISG+++ G L+LAHD F+R+P K+ VSWNSMISG
Sbjct: 339 MSEASNLFSKMPNPDVLTWNSIISGYAQAGKLELAHDYFERMPHKNRVSWNSMISG 394

Query: 65   124
           
Sbjct: 399  394

Query: 125  173
           
Sbjct: 459  394

[Close]

BLAST of CU168041 vs. NCBI nr
Match: gi|778723087|ref|XP_004144924.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.5e-24
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG
Sbjct: 341 MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 396

Query: 65   124
           
Sbjct: 401  396

Query: 125  173
           
Sbjct: 461  396

[Close]

BLAST of CU168041 vs. NCBI nr
Match: gi|659094162|ref|XP_008447916.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 8.6e-23
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           MKEASNLFSRMPEPDTLSWNMMISGFSEIGSL+LA DLFKRIPEKSLVSWNSMISG
Sbjct: 346 MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLELARDLFKRIPEKSLVSWNSMISG 401

Query: 65   124
           
Sbjct: 406  401

Query: 125  173
           
Sbjct: 466  401

[Close]

BLAST of CU168041 vs. NCBI nr
Match: gi|1009150908|ref|XP_015893275.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 97.8 bits (242), Expect = 6.4e-18
Identity = 42/56 (75.00%), Postives = 53/56 (94.64%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EASNLFS+MPEPDTLSWN MISGF++IG+L+LAH  F+R+P+K+LVSWNSMI+G
Sbjct: 385 MEEASNLFSKMPEPDTLSWNSMISGFAQIGNLELAHAFFERMPQKNLVSWNSMIAG 440

Query: 65   124
           
Sbjct: 445  440

Query: 125  173
           
Sbjct: 505  440

[Close]

BLAST of CU168041 vs. NCBI nr
Match: gi|255560453|ref|XP_002521241.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial [Ricinus communis])

HSP 1 Score: 94.4 bits (233), Expect = 7.1e-17
Identity = 39/56 (69.64%), Postives = 52/56 (92.86%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EASNLF +MP PDTLSWN+MISG+++ GSL+LAHD F+R+P+K+LVSWNS+I+G
Sbjct: 333 MEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAG 388

Query: 65   124
           
Sbjct: 393  388

Query: 125  173
           
Sbjct: 453  388

[Close]

BLAST of CU168041 vs. NCBI nr
Match: gi|641840338|gb|KDO59259.1| (hypothetical protein CISIN_1g036340mg [Citrus sinensis])

HSP 1 Score: 91.3 bits (225), Expect = 6.0e-16
Identity = 38/56 (67.86%), Postives = 51/56 (91.07%), Query Frame = -2


Query: 5   MKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISG 64
           M+EASNLF +MP PDTL+WN M+SG+++IG+L+LA D FKR+P+K+LVSWNSMI+G
Sbjct: 249 MEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMPQKNLVSWNSMIAG 304

Query: 65   124
           
Sbjct: 309  304

Query: 125  173
           
Sbjct: 369  304

The following BLAST results are available for this feature:

BLAST of CU168041 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PPR43_ARATH	9.9e-11	52.73	Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana GN...	[more]
PPR88_ARATH	1.7e-10	50.91	Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop...	[more]
PP394_ARATH	2.4e-09	44.64	Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop...	[more]
PP449_ARATH	5.4e-09	47.27	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN...	[more]
PP419_ARATH	7.1e-09	50.00	Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidop...	[more]

BLAST of CU168041 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1D8_CUCSA	1.6e-23	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017120 PE=4 SV=1	[more]
A0A0A0K1D8_CUCSA	7.9e-15	58.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G017120 PE=4 SV=1	[more]
B9S5H2_RICCO	4.9e-09	41.67	Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO...	[more]
V4WDU6_9ROSI	9.3e-08	39.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007675mg PE=4 SV=1	[more]
A0A067EVV8_CITSI	9.3e-08	39.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036340mg PE=4 SV=1	[more]

BLAST of CU168041 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778723087\|ref\|XP_004144924.2\|	3.5e-24	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial ...	[more]
gi\|659094162\|ref\|XP_008447916.1\|	8.6e-23	96.43	PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial ...	[more]
gi\|1009150908\|ref\|XP_015893275.1\|	6.4e-18	75.00	PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial ...	[more]
gi\|255560453\|ref\|XP_002521241.1\|	7.1e-17	69.64	PREDICTED: pentatricopeptide repeat-containing protein At1g62260, mitochondrial ...	[more]
gi\|641840338\|gb\|KDO59259.1\|	6.0e-16	67.86	hypothetical protein CISIN_1g036340mg [Citrus sinensis]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G017120	Csa7G017120	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
H0116600	H0116600	EST