CU167925 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU167925
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGlutaredoxin
LocationChr5 : 4414257 .. 4414450 (+)
Sequence length201
The following sequences are available for this feature:

transcribed_cluster sequence

GTGTGAAGGATGCGGGGGAGCGAGGTTTGTGCCATGTTATGAATGTGGAGGGAGCTGTAAAGTGATAAAAGGGGGCAACAAAAGGAGAGATGTGGAGCATGCAATGAGAATGGTTTGGCTCACTAGCCCTGCCTGTCATTGAAACTATCTTCGATGCCATCATAGAATAATGGAATTTGAATTGCTATTTTTATACTTCTT
BLAST of CU167925 vs. TrEMBL
Match: A0A0A0KQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.3e-08
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPCYECGGSCKVIKG  K R
Sbjct: 317 CEGCGGARFVPCYECGGSCKVIKGDTKER 345

Query: 62  89
           
Sbjct: 377 345

BLAST of CU167925 vs. TrEMBL
Match: A0A0A0KQR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1)

HSP 1 Score: 40.0 bits (92), Expect = 1.3e+00
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 1

Query: 70  RGQQKERCGACNENGLAH*P 129
           +G  KERCGACNENGLAH P
Sbjct: 339 KGDTKERCGACNENGLAHCP 358


HSP 2 Score: 58.2 bits (139), Expect = 4.5e-06
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPC ECGGSCK+I G +K R
Sbjct: 336 CEGCGGARFVPCMECGGSCKLIVGNDKER 364

Query: 62  89
           
Sbjct: 396 364

BLAST of CU167925 vs. TrEMBL
Match: A0A0K9R3A2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117160 PE=4 SV=1)

HSP 1 Score: 32.7 bits (73), Expect = 2.1e+02
Identity = 13/19 (68.42%), Postives = 13/19 (68.42%), Query Frame = 1

Query: 73  GQQKERCGACNENGLAH*P 130
           G  KERC  CNENGL H P
Sbjct: 359 GNDKERCPKCNENGLIHCP 377


HSP 2 Score: 58.2 bits (139), Expect = 4.5e-06
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPC++CGGSCKV+ G  K R
Sbjct: 134 CEGCGGARFVPCFDCGGSCKVVNGDIKER 162

Query: 62  89
           
Sbjct: 194 162

BLAST of CU167925 vs. TrEMBL
Match: M1AWL2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012263 PE=4 SV=1)

HSP 1 Score: 31.6 bits (70), Expect = 4.6e+02
Identity = 13/19 (68.42%), Postives = 13/19 (68.42%), Query Frame = 1

Query: 73  GQQKERCGACNENGLAH*P 130
           G  KERC  CNENGL H P
Sbjct: 157 GDIKERCPECNENGLIHCP 175


HSP 2 Score: 58.2 bits (139), Expect = 4.5e-06
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPC++CGGSCKV+ G  K R
Sbjct: 349 CEGCGGARFVPCFDCGGSCKVVNGDVKER 377

Query: 62  89
           
Sbjct: 409 377

BLAST of CU167925 vs. TrEMBL
Match: K4CPQ5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 32.0 bits (71), Expect = 3.5e+02
Identity = 13/19 (68.42%), Postives = 13/19 (68.42%), Query Frame = 1

Query: 73  GQQKERCGACNENGLAH*P 130
           G  KERC  CNENGL H P
Sbjct: 372 GDVKERCPKCNENGLIHCP 390


HSP 2 Score: 58.2 bits (139), Expect = 4.5e-06
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPC++CGGSCKV+ G  K R
Sbjct: 347 CEGCGGARFVPCFDCGGSCKVVNGDIKER 375

Query: 62  89
           
Sbjct: 407 375

BLAST of CU167925 vs. NCBI nr
Match: gi|449452408|ref|XP_004143951.1| (PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-07
Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPCYECGGSCKVIKG  K R
Sbjct: 317 CEGCGGARFVPCYECGGSCKVIKGDTKER 345

Query: 62  89
           
Sbjct: 377 345

BLAST of CU167925 vs. NCBI nr
Match: gi|1009156011|ref|XP_015896017.1| (PREDICTED: uncharacterized protein LOC107429784 [Ziziphus jujuba])

HSP 1 Score: 59.7 bits (143), Expect = 2.2e-06
Identity = 25/45 (55.56%), Postives = 30/45 (66.67%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRRDVEHAMRMVWLTSPAC 61
           CEGCGGARFVPC ECGGSCKV+  G+K++          +  PAC
Sbjct: 332 CEGCGGARFVPCLECGGSCKVVVDGDKKQRCSVCNENGLVHCPAC 376

Query: 62  121
           
Sbjct: 392 376

Query: 122 137
           
Sbjct: 452 376

BLAST of CU167925 vs. NCBI nr
Match: gi|659074080|ref|XP_008437411.1| (PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 3.8e-06
Identity = 25/29 (86.21%), Postives = 25/29 (86.21%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRR 61
           CEGCGGARFVPCYECGGS KVIKG  K R
Sbjct: 317 CEGCGGARFVPCYECGGSRKVIKGDTKER 345

Query: 62  89
           
Sbjct: 377 345

BLAST of CU167925 vs. NCBI nr
Match: gi|590679400|ref|XP_007040570.1| (Electron transporter, putative [Theobroma cacao])

HSP 1 Score: 58.2 bits (139), Expect = 6.5e-06
Identity = 25/45 (55.56%), Postives = 28/45 (62.22%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVIKGGNKRRDVEHAMRMVWLTSPAC 61
           C GCGGARFVPC ECGGSCKV+  G+KR           +  PAC
Sbjct: 351 CGGCGGARFVPCLECGGSCKVVVSGDKRERCGKCNENGLVHCPAC 395

Query: 62  121
           
Sbjct: 411 395

Query: 122 137
           
Sbjct: 471 395

BLAST of CU167925 vs. NCBI nr
Match: gi|835980770|ref|XP_012701791.1| (PREDICTED: tau-tubulin kinase 1 [Setaria italica])

HSP 1 Score: 57.8 bits (138), Expect = 8.5e-06
Identity = 29/51 (56.86%), Postives = 33/51 (64.71%), Query Frame = 2

Query: 2   CEGCGGARFVPCYECGGSCKVI--KGGNKRRDV---EHAMRMVWLTSPACH 61
           CEGCGGARFVPC+ECGGSCKV+  KGG   R     E+ + M     P CH
Sbjct: 339 CEGCGGARFVPCWECGGSCKVVVEKGGEVERCAKCNENGLMM----CPICH 385

Query: 62  121
           
Sbjct: 399 385

Query: 122 140
           
Sbjct: 459 385

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KQR0_CUCSA6.3e-0889.66Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1[more]
A0A0A0KQR0_CUCSA1.3e+0080.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148770 PE=4 SV=1[more]
A0A0K9R3A2_SPIOL2.1e+0268.42Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117160 PE=4 SV=1[more]
M1AWL2_SOLTU4.6e+0268.42Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012263 PE=4 SV=1[more]
K4CPQ5_SOLLC3.5e+0268.42Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449452408|ref|XP_004143951.1|1.5e-0789.66PREDICTED: uncharacterized protein LOC101208965 [Cucumis sativus][more]
gi|1009156011|ref|XP_015896017.1|2.2e-0655.56PREDICTED: uncharacterized protein LOC107429784 [Ziziphus jujuba][more]
gi|659074080|ref|XP_008437411.1|3.8e-0686.21PREDICTED: uncharacterized protein LOC103482835 [Cucumis melo][more]
gi|590679400|ref|XP_007040570.1|6.5e-0655.56Electron transporter, putative [Theobroma cacao][more]
gi|835980770|ref|XP_012701791.1|8.5e-0656.86PREDICTED: tau-tubulin kinase 1 [Setaria italica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa5G148770Csa5G148770gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0115559H0115559EST