CU167178 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU167178
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 11231474 .. 11231677 (+)
Sequence length209
The following sequences are available for this feature:

transcribed_cluster sequence

GTCAGAGTCAATAATCCCTTTATAAACAGTAGCAAAAGAGCCACGCCCCCAAGTGTTGGATGAATCCACCTGTGGCATTGTTGAGCTCTTCGTAGCTAAAGATCCTGATATTCAGTACACCTAAAATGGAAGGGTCTTTTTCAACCACATCCGATTTCCTTTTCCTGAAATGGTAACAAATGAATAAAGTGAGAAGGAATAAGAGAAAG
BLAST of CU167178 vs. TrEMBL
Match: A0A0A0KZA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G289620 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.8e-22
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = -2

Query: 35  FLLFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           F+LFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLG   F
Sbjct: 443 FILFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGRGSF 500

Query: 95  154
           
Sbjct: 503 500

Query: 155 209
           
Sbjct: 563 500

BLAST of CU167178 vs. TrEMBL
Match: A0A0A0KZA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G289620 PE=4 SV=1)

HSP 1 Score: 36.2 bits (82), Expect = 1.9e+01
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = -3

Query: 1   GRGSFATVYKGIIDSD 49
           GRGSFATVYKGIIDSD
Sbjct: 496 GRGSFATVYKGIIDSD 511


HSP 2 Score: 73.6 bits (179), Expect = 1.1e-10
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -2

Query: 35  FLLFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           F LFLLTLFI Y  +KRKS  V++DPSIL V N+RIFSYEELN AT GFI  LG   F
Sbjct: 476 FFLFLLTLFIGYRLKKRKSKPVQRDPSILDV-NLRIFSYEELNKATSGFIHQLGRGSF 532

Query: 95  154
           
Sbjct: 536 532

Query: 155 209
           
Sbjct: 596 532

BLAST of CU167178 vs. TrEMBL
Match: A0A0A0L0L8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G288620 PE=4 SV=1)

HSP 1 Score: 32.7 bits (73), Expect = 2.1e+02
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = -3

Query: 1   GRGSFATVYKGIIDSD 49
           GRGSFATVYKG IDS+
Sbjct: 528 GRGSFATVYKGTIDSE 543

BLAST of CU167178 vs. NCBI nr
Match: gi|778697635|ref|XP_011654364.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-22
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = -2

Query: 35  FLLFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           F+LFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLG   F
Sbjct: 406 FILFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGRGSF 463

Query: 95  154
           
Sbjct: 466 463

Query: 155 209
           
Sbjct: 526 463

BLAST of CU167178 vs. NCBI nr
Match: gi|700198986|gb|KGN54144.1| (hypothetical protein Csa_4G289620 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-22
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = -2

Query: 35  FLLFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           F+LFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLG   F
Sbjct: 443 FILFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGRGSF 500

Query: 95  154
           
Sbjct: 503 500

Query: 155 209
           
Sbjct: 563 500

BLAST of CU167178 vs. NCBI nr
Match: gi|778693110|ref|XP_011653579.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 5.4e-11
Identity = 36/44 (81.82%), Postives = 39/44 (88.64%), Query Frame = -2

Query: 35  RKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           +KRKSDVVE+DP ILGV N+RIFSYEELNNATGGFIQHLG   F
Sbjct: 45  QKRKSDVVEEDPFILGV-NLRIFSYEELNNATGGFIQHLGRGSF 87

Query: 95  154
           
Sbjct: 105 87

Query: 155 167
           
Sbjct: 165 87

BLAST of CU167178 vs. NCBI nr
Match: gi|700198984|gb|KGN54142.1| (hypothetical protein Csa_4G288620 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-11
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -2

Query: 35  FLLFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           F LFLLTLFI Y  +KRKS  V++DPSIL V N+RIFSYEELN AT GFI  LG   F
Sbjct: 476 FFLFLLTLFIGYRLKKRKSKPVQRDPSILDV-NLRIFSYEELNKATSGFIHQLGRGSF 532

Query: 95  154
           
Sbjct: 536 532

Query: 155 209
           
Sbjct: 596 532

BLAST of CU167178 vs. NCBI nr
Match: gi|778693113|ref|XP_011653580.1| (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-11
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -2

Query: 35  FLLFLLTLFICYHFRKRKSDVVEKDPSILGVLNIRIFSYEELNNATGGFIQHLGAWLF 94
           F LFLLTLFI Y  +KRKS  V++DPSIL V N+RIFSYEELN AT GFI  LG   F
Sbjct: 476 FFLFLLTLFIGYRLKKRKSKPVQRDPSILDV-NLRIFSYEELNKATSGFIHQLGRGSF 532

Query: 95  154
           
Sbjct: 536 532

Query: 155 209
           
Sbjct: 596 532

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KZA1_CUCSA2.8e-2293.10Uncharacterized protein OS=Cucumis sativus GN=Csa_4G289620 PE=4 SV=1[more]
A0A0A0KZA1_CUCSA1.9e+01100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G289620 PE=4 SV=1[more]
A0A0A0L0L8_CUCSA2.1e+0287.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G288620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778697635|ref|XP_011654364.1|1.8e-2293.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [C... [more]
gi|700198986|gb|KGN54144.1|1.8e-2293.10hypothetical protein Csa_4G289620 [Cucumis sativus][more]
gi|778693110|ref|XP_011653579.1|5.4e-1181.82PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [C... [more]
gi|700198984|gb|KGN54142.1|7.0e-1167.24hypothetical protein Csa_4G288620 [Cucumis sativus][more]
gi|778693113|ref|XP_011653580.1|7.0e-1167.24PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [C... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G289620Csa4G289620gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0108680H0108680EST