CU166591 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU166591
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUPF0329 protein ECU01_0100/ECU01_1510/ECU08_0030, putative isoform 2
LocationChr1 : 679062 .. 679202 (+)
Sequence length146
The following sequences are available for this feature:

transcribed_cluster sequence

AGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATAGAAAGCCATTGAGAAGTGGAAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGAATGGAT
BLAST of CU166591 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.1e-12
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 3

Query: 3   GTPNTIFEQIQQERARRDRKPLRSGKQLYHAIKIELDDLIQRTHNG 62
           GTPNTIFEQIQQERARRD + +   KQLYHAIKIELDDLIQRTHNG
Sbjct: 101 GTPNTIFEQIQQERARRD-EAIEKWKQLYHAIKIELDDLIQRTHNG 145

Query: 63  122
           
Sbjct: 161 145

Query: 123 141
           
Sbjct: 221 145

BLAST of CU166591 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 3.4e-12
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 3

Query: 3   GTPNTIFEQIQQERARRDRKPLRSGKQLYHAIKIELDDLIQRTHNG 62
           GTPNTIFEQIQQERARRD + +   KQLYHAIKIELDDLIQRTHNG
Sbjct: 101 GTPNTIFEQIQQERARRD-EAIEKWKQLYHAIKIELDDLIQRTHNG 145

Query: 63  122
           
Sbjct: 161 145

Query: 123 141
           
Sbjct: 221 145

BLAST of CU166591 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo])

HSP 1 Score: 78.2 bits (191), Expect = 4.4e-12
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 3

Query: 3   GTPNTIFEQIQQERARRDRKPLRSGKQLYHAIKIELDDLIQRTHNG 62
           GTPNTIFEQIQQERARRD + +   KQLYHAIKIELDDLIQRTHNG
Sbjct: 101 GTPNTIFEQIQQERARRD-EAVEKWKQLYHAIKIELDDLIQRTHNG 145

Query: 63  122
           
Sbjct: 161 145

Query: 123 141
           
Sbjct: 221 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LS07_CUCSA3.1e-1284.78Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449440646|ref|XP_004138095.1|3.4e-1284.78PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus][more]
gi|659129099|ref|XP_008464528.1|4.4e-1284.78PREDICTED: WD repeat-containing protein 65-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G004180Csa1G004180gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0103307H0103307EST