CU165087 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU165087
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCONSTANS-like 1 protein
LocationChr4 : 7613254 .. 7615315 (-)
Sequence length247
The following sequences are available for this feature:

transcribed_cluster sequence

GATGCTTCTGAATTCTTTCACACTTCTTCAAAACCTTCTTTCTCCTACAATGGCTTCCTCACCCATGCTATATCGGTCTCCTCGATGGAGGTGGGAGTGGTACCGGAATCAACAGCAGCAATAATGAGCGACATATCAATCTCCAACATGAGGCCACCAAAAGGAACAATCGATCTCTTCTCCGGCATGATAGCGGCGGAGCCGGCGGCGGCGAGTCAAATGCCGGCGGCCCCAACTGAGTCCAATG
BLAST of CU165087 vs. TrEMBL
Match: A0A0A0KY36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.3e-26
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 1

Query: 1   DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLF 60
           DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTA IMSDISISNMRPPKGTIDLF
Sbjct: 192 DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTIDLF 251

Query: 61  SGMI 120
           SGMI
Sbjct: 252 SGMI 255

Query: 121 180
           
Sbjct: 312 255

Query: 181 193
           
Sbjct: 372 255

BLAST of CU165087 vs. TrEMBL
Match: A0A061EG80_THECC (Zinc finger protein CONSTANS-LIKE 2 OS=Theobroma cacao GN=TCM_019107 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.2e-11
Identity = 37/56 (66.07%), Postives = 49/56 (87.50%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK ++SYNG ++H++S+SS++VG+VPEST   MSDISIS+ RPPKGTIDLFSG
Sbjct: 247 YESSKAAYSYNGSVSHSVSLSSVDVGIVPEST---MSDISISHRRPPKGTIDLFSG 299

Query: 79  138
           
Sbjct: 307 299

Query: 139 187
           
Sbjct: 367 299

BLAST of CU165087 vs. TrEMBL
Match: V4STR5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-11
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+ RPPKGTIDLFSG
Sbjct: 230 YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISHSRPPKGTIDLFSG 282

Query: 79  138
           
Sbjct: 290 282

Query: 139 187
           
Sbjct: 350 282

BLAST of CU165087 vs. TrEMBL
Match: A0A067EUU9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017819mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-11
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+ RPPKGTIDLFSG
Sbjct: 230 YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISHSRPPKGTIDLFSG 282

Query: 79  138
           
Sbjct: 290 282

Query: 139 187
           
Sbjct: 350 282

BLAST of CU165087 vs. TrEMBL
Match: D9ZIX4_MALDO (COL domain class transcription factor OS=Malus domestica GN=COL8 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-11
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK ++SYNG L+H++SVSSM+VGVVP+ST   MSDISIS+ R PKGTIDLFSG
Sbjct: 258 YESSKAAYSYNGSLSHSVSVSSMDVGVVPDST---MSDISISHPRTPKGTIDLFSG 310

Query: 79  138
           
Sbjct: 318 310

Query: 139 187
           
Sbjct: 378 310

BLAST of CU165087 vs. NCBI nr
Match: gi|449438975|ref|XP_004137263.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-25
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 1

Query: 1   DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLF 60
           DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTA IMSDISISNMRPPKGTIDLF
Sbjct: 192 DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTATIMSDISISNMRPPKGTIDLF 251

Query: 61  SGMI 120
           SGMI
Sbjct: 252 SGMI 255

Query: 121 180
           
Sbjct: 312 255

Query: 181 193
           
Sbjct: 372 255

BLAST of CU165087 vs. NCBI nr
Match: gi|659111102|ref|XP_008455579.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-22
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 1

Query: 1   DASEFFHTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLF 60
           DASEFFHTSSKPS+SYNGFLTHAISVSSMEVGVVPEST   MSDISISN+RPPKGTIDLF
Sbjct: 197 DASEFFHTSSKPSYSYNGFLTHAISVSSMEVGVVPESTTTTMSDISISNVRPPKGTIDLF 256

Query: 61  SG 120
           SG
Sbjct: 257 SG 258

Query: 121 180
           
Sbjct: 317 258

Query: 181 187
           
Sbjct: 377 258

BLAST of CU165087 vs. NCBI nr
Match: gi|590651730|ref|XP_007032965.1| (Zinc finger protein CONSTANS-LIKE 2 [Theobroma cacao])

HSP 1 Score: 74.7 bits (182), Expect = 8.3e-11
Identity = 37/56 (66.07%), Postives = 49/56 (87.50%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK ++SYNG ++H++S+SS++VG+VPEST   MSDISIS+ RPPKGTIDLFSG
Sbjct: 247 YESSKAAYSYNGSVSHSVSLSSVDVGIVPEST---MSDISISHRRPPKGTIDLFSG 299

Query: 79  138
           
Sbjct: 307 299

Query: 139 187
           
Sbjct: 367 299

BLAST of CU165087 vs. NCBI nr
Match: gi|641839955|gb|KDO58878.1| (hypothetical protein CISIN_1g017819mg [Citrus sinensis])

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-10
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK  +SYNG ++H++SVSS ++GVVPEST   MSDISIS+ RPPKGTIDLFSG
Sbjct: 230 YDSSKAGYSYNGSISHSVSVSSTDLGVVPEST---MSDISISHSRPPKGTIDLFSG 282

Query: 79  138
           
Sbjct: 290 282

Query: 139 187
           
Sbjct: 350 282

BLAST of CU165087 vs. NCBI nr
Match: gi|302398765|gb|ADL36677.1| (COL domain class transcription factor [Malus domestica])

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-10
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 1

Query: 19  HTSSKPSFSYNGFLTHAISVSSMEVGVVPESTAAIMSDISISNMRPPKGTIDLFSG 78
           + SSK ++SYNG L+H++SVSSM+VGVVP+ST   MSDISIS+ R PKGTIDLFSG
Sbjct: 258 YESSKAAYSYNGSLSHSVSVSSMDVGVVPDST---MSDISISHPRTPKGTIDLFSG 310

Query: 79  138
           
Sbjct: 318 310

Query: 139 187
           
Sbjct: 378 310

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KY36_CUCSA1.3e-2698.44Uncharacterized protein OS=Cucumis sativus GN=Csa_4G124910 PE=4 SV=1[more]
A0A061EG80_THECC1.2e-1166.07Zinc finger protein CONSTANS-LIKE 2 OS=Theobroma cacao GN=TCM_019107 PE=4 SV=1[more]
V4STR5_9ROSI1.5e-1167.86Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012022mg PE=4 SV=1[more]
A0A067EUU9_CITSI1.5e-1167.86Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017819mg PE=4 SV=1[more]
D9ZIX4_MALDO1.5e-1169.64COL domain class transcription factor OS=Malus domestica GN=COL8 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
gi|449438975|ref|XP_004137263.1|1.6e-2598.44PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Cucumis sativus][more]
gi|659111102|ref|XP_008455579.1|1.2e-2291.94PREDICTED: zinc finger protein CONSTANS-LIKE 2 [Cucumis melo][more]
gi|590651730|ref|XP_007032965.1|8.3e-1166.07Zinc finger protein CONSTANS-LIKE 2 [Theobroma cacao][more]
gi|641839955|gb|KDO58878.1|1.1e-1067.86hypothetical protein CISIN_1g017819mg [Citrus sinensis][more]
gi|302398765|gb|ADL36677.1|1.1e-1069.64COL domain class transcription factor [Malus domestica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G124910Csa4G124910gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0088136H0088136EST