CU164851 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU164851
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Fructokinase-1
Location	Chr4 : 18757059 .. 18757811 (-)
Sequence length	234

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGAAAACTTGGTGATGATGACTATGGTCAGGCCATGTTGTATTATATGAATGTGAATAATGTTCAGACTCGATCAGTTCGGGTTGACAGTAAGCGGACAACAGCTGTGTCACATATGAAAATTGGCAAGAGGGGTCGCTTGAAAATGACTTGTGTTAAATCTAGTGCAGAAGATTATTTATCAAAGTCAGAGATCAACATAGATGTGTTAAAGGAGGCTAAAATGTTCTACTTT

Library


Library category	ESTs
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU164851 vs. Swiss-Prot
Match: SCKL2_ARATH (Fructokinase-like 2, chloroplastic OS=Arabidopsis thaliana GN=FLN2 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 5.5e-28
Identity = 61/78 (78.21%), Postives = 64/78 (82.05%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLG DDYGQAMLYY+NV  VQTRSV++D KR TA S MKI KRGRLK TC+K  AED L
Sbjct: 272 GKLGADDYGQAMLYYLNVCKVQTRSVKIDGKRVTACSTMKISKRGRLKSTCIKPCAEDSL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           SKSEIN+DVLKEAKMFYF
Sbjct: 332 SKSEINVDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

[Close]

BLAST of CU164851 vs. Swiss-Prot
Match: SCKL1_ARATH (Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana GN=FLN1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.6e-11
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIG-KRGRLKMTCVKSSAEDY 60
           GK+G+DD+G  ++  MN   VQTR+V+ D    TA + +KI  K G++    VK   ED 
Sbjct: 169 GKVGEDDFGDELVLMMNQERVQTRAVKFDENSKTACTRVKIKFKDGKMMAETVKEPPEDS 228

Query: 61  LSKSEINIDVLKEAKMFYF 120
           L  SE+N+ VLKEA++F+F
Sbjct: 229 LFASELNLAVLKEARIFHF 247

Query: 121  180
           
Sbjct: 289  247

Query: 181  235
           
Sbjct: 349  247

[Close]

BLAST of CU164851 vs. Swiss-Prot
Match: SCRK5_ARATH (Probable fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-06
Identity = 25/79 (31.65%), Postives = 45/79 (56.96%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GK GDD++G  ++  +  N V +  V  D+   TA++ + + K G  +    ++ + D L
Sbjct: 58  GKFGDDEFGHMLVNILKKNGVNSEGVCFDTNARTALAFVTLKKDGEREFMFYRNPSADML 117

Query: 61  SK-SEINIDVLKEAKMFYF 120
            K SE+N D++K+AK+F++
Sbjct: 118 LKESELNKDLIKKAKIFHY 136

Query: 121  180
           
Sbjct: 178  136

Query: 181  235
           
Sbjct: 238  136

[Close]

BLAST of CU164851 vs. TrEMBL
Match: A0A0A0L422_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571770 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL
Sbjct: 286 GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 345

Query: 61  SKSEINIDVLKEAKMFYF 120
           SKSEINIDVLKEAKMFYF
Sbjct: 346 SKSEINIDVLKEAKMFYF 363

Query: 121  180
           
Sbjct: 406  363

Query: 181  235
           
Sbjct: 466  363

[Close]

BLAST of CU164851 vs. TrEMBL
Match: V4STJ9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031077mg PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-30
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+D+KR TAVS MKIGKRGRL+MTCVK  AED L
Sbjct: 272 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDAKRPTAVSQMKIGKRGRLRMTCVKPCAEDAL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           +KSEINIDVLKEAKMFYF
Sbjct: 332 TKSEINIDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

[Close]

BLAST of CU164851 vs. TrEMBL
Match: A0A067G4G1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0081612mg PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-30
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+D+KR TAVS MKIGKRGRL+MTCVK  AED L
Sbjct: 272 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDAKRPTAVSQMKIGKRGRLRMTCVKPCAEDAL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           +KSEINIDVLKEAKMFYF
Sbjct: 332 TKSEINIDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

[Close]

BLAST of CU164851 vs. TrEMBL
Match: A0A067G3Q1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0081612mg PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.4e-30
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+D+KR TAVS MKIGKRGRL+MTCVK  AED L
Sbjct: 272 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDAKRPTAVSQMKIGKRGRLRMTCVKPCAEDAL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           +KSEINIDVLKEAKMFYF
Sbjct: 332 TKSEINIDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

[Close]

BLAST of CU164851 vs. TrEMBL
Match: M5XDX2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003690mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-30
Identity = 68/78 (87.18%), Postives = 72/78 (92.31%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+DSKR TAVS MKIGKR RL++TCVK  AED L
Sbjct: 253 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDSKRATAVSQMKIGKRARLRLTCVKPCAEDSL 312

Query: 61  SKSEINIDVLKEAKMFYF 120
           SKSEINIDVLKEAKMFYF
Sbjct: 313 SKSEINIDVLKEAKMFYF 330

Query: 121  180
           
Sbjct: 373  330

Query: 181  235
           
Sbjct: 433  330

[Close]

BLAST of CU164851 vs. NCBI nr
Match: gi|778695160|ref|XP_004144690.2| (PREDICTED: fructokinase-like 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL
Sbjct: 286 GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 345

Query: 61  SKSEINIDVLKEAKMFYF 120
           SKSEINIDVLKEAKMFYF
Sbjct: 346 SKSEINIDVLKEAKMFYF 363

Query: 121  180
           
Sbjct: 406  363

Query: 181  235
           
Sbjct: 466  363

[Close]

BLAST of CU164851 vs. NCBI nr
Match: gi|659083217|ref|XP_008442238.1| (PREDICTED: uncharacterized protein LOC103486152 [Cucumis melo])

HSP 1 Score: 147.9 bits (372), Expect = 7.4e-33
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDDDYGQAMLYYMNVNNVQTRSV+VDSKRTTAVS MKIGKRGRLKMTCVKSSAED L
Sbjct: 286 GKLGDDDYGQAMLYYMNVNNVQTRSVQVDSKRTTAVSQMKIGKRGRLKMTCVKSSAEDSL 345

Query: 61  SKSEINIDVLKEAKMFYF 120
           SKSEINIDVLKEAKMFYF
Sbjct: 346 SKSEINIDVLKEAKMFYF 363

Query: 121  180
           
Sbjct: 406  363

Query: 181  235
           
Sbjct: 466  363

[Close]

BLAST of CU164851 vs. NCBI nr
Match: gi|641851450|gb|KDO70321.1| (hypothetical protein CISIN_1g0081612mg [Citrus sinensis])

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-30
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+D+KR TAVS MKIGKRGRL+MTCVK  AED L
Sbjct: 272 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDAKRPTAVSQMKIGKRGRLRMTCVKPCAEDAL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           +KSEINIDVLKEAKMFYF
Sbjct: 332 TKSEINIDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

[Close]

BLAST of CU164851 vs. NCBI nr
Match: gi|567890745|ref|XP_006437893.1| (hypothetical protein CICLE_v10031077mg [Citrus clementina])

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-30
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+D+KR TAVS MKIGKRGRL+MTCVK  AED L
Sbjct: 272 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDAKRPTAVSQMKIGKRGRLRMTCVKPCAEDAL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           +KSEINIDVLKEAKMFYF
Sbjct: 332 TKSEINIDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

[Close]

BLAST of CU164851 vs. NCBI nr
Match: gi|641851451|gb|KDO70322.1| (hypothetical protein CISIN_1g0081612mg, partial [Citrus sinensis])

HSP 1 Score: 137.9 bits (346), Expect = 7.6e-30
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1   GKLGDDDYGQAMLYYMNVNNVQTRSVRVDSKRTTAVSHMKIGKRGRLKMTCVKSSAEDYL 60
           GKLGDD+YGQAMLYYMNVNNVQTRSVR+D+KR TAVS MKIGKRGRL+MTCVK  AED L
Sbjct: 272 GKLGDDEYGQAMLYYMNVNNVQTRSVRIDAKRPTAVSQMKIGKRGRLRMTCVKPCAEDAL 331

Query: 61  SKSEINIDVLKEAKMFYF 120
           +KSEINIDVLKEAKMFYF
Sbjct: 332 TKSEINIDVLKEAKMFYF 349

Query: 121  180
           
Sbjct: 392  349

Query: 181  235
           
Sbjct: 452  349

The following BLAST results are available for this feature:

BLAST of CU164851 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCKL2_ARATH	5.5e-28	78.21	Fructokinase-like 2, chloroplastic OS=Arabidopsis thaliana GN=FLN2 PE=1 SV=2	[more]
SCKL1_ARATH	3.6e-11	44.30	Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana GN=FLN1 PE=1 SV=1	[more]
SCRK5_ARATH	5.9e-06	31.65	Probable fructokinase-5 OS=Arabidopsis thaliana GN=At4g10260 PE=2 SV=1	[more]

BLAST of CU164851 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L422_CUCSA	5.0e-36	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G571770 PE=4 SV=1	[more]
V4STJ9_9ROSI	1.4e-30	87.18	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031077mg PE=4 SV=1	[more]
A0A067G4G1_CITSI	1.4e-30	87.18	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0081612mg PE=4 SV=1	[more]
A0A067G3Q1_CITSI	1.4e-30	87.18	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0081612mg PE=4 ...	[more]
M5XDX2_PRUPE	2.4e-30	87.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003690mg PE=4 SV=1	[more]

BLAST of CU164851 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695160\|ref\|XP_004144690.2\|	2.7e-35	100.00	PREDICTED: fructokinase-like 2, chloroplastic [Cucumis sativus]	[more]
gi\|659083217\|ref\|XP_008442238.1\|	7.4e-33	96.15	PREDICTED: uncharacterized protein LOC103486152 [Cucumis melo]	[more]
gi\|641851450\|gb\|KDO70321.1\|	7.6e-30	87.18	hypothetical protein CISIN_1g0081612mg [Citrus sinensis]	[more]
gi\|567890745\|ref\|XP_006437893.1\|	7.6e-30	87.18	hypothetical protein CICLE_v10031077mg [Citrus clementina]	[more]
gi\|641851451\|gb\|KDO70322.1\|	7.6e-30	87.18	hypothetical protein CISIN_1g0081612mg, partial [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR011611	PfkB_dom

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G571770	Csa4G571770	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
H0085962	H0085962	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011611	Carbohydrate kinase PfkB	PFAM	PF00294	PfkB	coord: 1..78 score: 3.
None	No IPR available	PANTHER	PTHR10584	SUGAR KINASE	coord: 1..78 score: 8.6
None	No IPR available	PANTHER	PTHR10584:SF155	FRUCTOKINASE-LIKE 2	coord: 1..78 score: 8.6