CU163789 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU163789
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 13970801 .. 13980379 (+)
Sequence length237
The following sequences are available for this feature:

transcribed_cluster sequence

ACCTTTTGGAGCTTCTCATTCAATTCAATGTCACCGCAGACAATCTTCTCGTCCCTCAGGATGTCGAGGATCAACAGCATCAAGAACTTCTTTCAGAACTTCTAATGCATTGCCAGCCTTTTCAATTATACTAGATTCTGATAATATCTGAGGTTCCACTCTAGCAACATTCTCCTGCTCAGATAATCTTATTACTCCATTTTGTGAAGTATTATTAATTTGCTGCTGGGTAGACTT
BLAST of CU163789 vs. TrEMBL
Match: A0A068VD20_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009831001 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-08
Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = -1

Query: 43  QENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           ++NVA+ EPQ +S+SSI++KAG ALEVL+EVLDAVD RHPEG +D
Sbjct: 168 EKNVAKDEPQKISDSSILQKAGAALEVLREVLDAVDTRHPEGAKD 212

Query: 103 162
           
Sbjct: 228 212

Query: 163 178
           
Sbjct: 288 212

BLAST of CU163789 vs. TrEMBL
Match: W9RQ74_9ROSA (TOM1-like protein 2 OS=Morus notabilis GN=L484_013104 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-07
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = -1

Query: 43  GVIRLSEQENVAR-VEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           G +  S  E  AR  EPQ + ESSII+KAGN LEVLKEVLDAVD +HPEG +D
Sbjct: 161 GELASSRHEGFARQAEPQDVPESSIIQKAGNVLEVLKEVLDAVDSQHPEGAKD 213

Query: 103 162
           
Sbjct: 221 213

Query: 163 199
           
Sbjct: 281 213

BLAST of CU163789 vs. TrEMBL
Match: A0A166ETT0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007809 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-07
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = -1

Query: 43  EQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           ++ NV + EP ++ ESSII+KAG ALEVLKEVLDAVD ++PEG +D
Sbjct: 167 QERNVPQPEPPVIPESSIIKKAGAALEVLKEVLDAVDKKNPEGAKD 212

Query: 103 162
           
Sbjct: 227 212

Query: 163 181
           
Sbjct: 287 212

BLAST of CU163789 vs. TrEMBL
Match: U5FGV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s00820g PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.4e-07
Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = -1

Query: 43  VEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           VEPQ++ ESSII+KA NALEVLKEVLDAVD ++PEG +D
Sbjct: 152 VEPQVVPESSIIQKASNALEVLKEVLDAVDSQNPEGAKD 190

Query: 103 160
           
Sbjct: 212 190

BLAST of CU163789 vs. TrEMBL
Match: B9IP43_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s00820g PE=4 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 8.4e-07
Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = -1

Query: 43  VEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           VEPQ++ ESSII+KA NALEVLKEVLDAVD ++PEG +D
Sbjct: 226 VEPQVVPESSIIQKASNALEVLKEVLDAVDSQNPEGAKD 264

Query: 103 160
           
Sbjct: 286 264

BLAST of CU163789 vs. NCBI nr
Match: gi|778694136|ref|XP_011653749.1| (PREDICTED: target of Myb protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 8.9e-18
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = -1

Query: 43  GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEG  D
Sbjct: 144 GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGARD 195

Query: 103 162
           
Sbjct: 204 195

Query: 163 199
           
Sbjct: 264 195

BLAST of CU163789 vs. NCBI nr
Match: gi|449449813|ref|XP_004142659.1| (PREDICTED: target of Myb protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 8.9e-18
Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = -1

Query: 43  GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEG  D
Sbjct: 161 GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGARD 212

Query: 103 162
           
Sbjct: 221 212

Query: 163 199
           
Sbjct: 281 212

BLAST of CU163789 vs. NCBI nr
Match: gi|659069348|ref|XP_008449359.1| (PREDICTED: LOW QUALITY PROTEIN: TOM1-like protein 1 [Cucumis melo])

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-16
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = -1

Query: 43  GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           G+IRLSEQENVARVEPQIL ESSIIEKAGNALEVLKEVLDAVDP+HPEG  D
Sbjct: 161 GIIRLSEQENVARVEPQILPESSIIEKAGNALEVLKEVLDAVDPQHPEGARD 212

Query: 103 162
           
Sbjct: 221 212

Query: 163 199
           
Sbjct: 281 212

BLAST of CU163789 vs. NCBI nr
Match: gi|700199333|gb|KGN54491.1| (hypothetical protein Csa_4G338950 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-16
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = -1

Query: 55  GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPE 114
           GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPE
Sbjct: 161 GVIRLSEQENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPE 208

Query: 115 174
           
Sbjct: 221 208

Query: 175 199
           
Sbjct: 281 208

BLAST of CU163789 vs. NCBI nr
Match: gi|661877477|emb|CDP18690.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-08
Identity = 31/45 (68.89%), Postives = 40/45 (88.89%), Query Frame = -1

Query: 43  QENVARVEPQILSESSIIEKAGNALEVLKEVLDAVDPRHPEGRED 102
           ++NVA+ EPQ +S+SSI++KAG ALEVL+EVLDAVD RHPEG +D
Sbjct: 168 EKNVAKDEPQKISDSSILQKAGAALEVLREVLDAVDTRHPEGAKD 212

Query: 103 162
           
Sbjct: 228 212

Query: 163 178
           
Sbjct: 288 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A068VD20_COFCA2.6e-0868.89Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00009831001 PE=4 SV=1[more]
W9RQ74_9ROSA1.3e-0764.15TOM1-like protein 2 OS=Morus notabilis GN=L484_013104 PE=4 SV=1[more]
A0A166ETT0_DAUCA6.4e-0763.04Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007809 PE=4 SV=1[more]
U5FGV1_POPTR8.4e-0774.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s00820g PE=4 SV=1[more]
B9IP43_POPTR8.4e-0774.36Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s00820g PE=4 SV=2[more]
Match NameE-valueIdentityDescription
gi|778694136|ref|XP_011653749.1|8.9e-1896.15PREDICTED: target of Myb protein 1 isoform X2 [Cucumis sativus][more]
gi|449449813|ref|XP_004142659.1|8.9e-1896.15PREDICTED: target of Myb protein 1 isoform X1 [Cucumis sativus][more]
gi|659069348|ref|XP_008449359.1|1.3e-1690.38PREDICTED: LOW QUALITY PROTEIN: TOM1-like protein 1 [Cucumis melo][more]
gi|700199333|gb|KGN54491.1|1.7e-16100.00hypothetical protein Csa_4G338950 [Cucumis sativus][more]
gi|661877477|emb|CDP18690.1|4.9e-0868.89unnamed protein product [Coffea canephora][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G338950Csa4G338950gene
Csa4G338940Csa4G338940gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0075969H0075969EST