CU163435 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU163435
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionThioredoxin M3, chloroplastic
LocationChr7 : 4928170 .. 4928399 (+)
Sequence length227
The following sequences are available for this feature:

transcribed_cluster sequence

TGTTCAAGAATGGGGAGAAATGTGATAGCGTGATAGGGACAATGCCAAAGGATTTCTATATTGCTGCCGTTGAAAGGGTCCTGAAGCAGTAGGAGACATGAGCAATCGAATAGGATATCTTTGGTAAGGTTGACCAGCTTGATTGTGCGAGTTGGTTGGCCATTTTGTTGCCAAAGCTTTCCACTGGTTTACTAGTTCTTGAGTGTATATAATAAATTAGCTTTTAA
BLAST of CU163435 vs. TrEMBL
Match: A0A0A0K2M6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073610 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLKQ 62
           FKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 137 FKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

Query: 63  90
           
Sbjct: 197 165

BLAST of CU163435 vs. TrEMBL
Match: C6T0F3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 143 FKNGEKCDSVIGTMPKEFYVAAIERVLK 170

Query: 63  87
           
Sbjct: 203 170

BLAST of CU163435 vs. TrEMBL
Match: A0A0R0J693_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G213700 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 118 FKNGEKCDSVIGTMPKEFYVAAIERVLK 145

Query: 63  87
           
Sbjct: 178 145

BLAST of CU163435 vs. TrEMBL
Match: A0A0B2SFK3_GLYSO (Thioredoxin M3, chloroplastic OS=Glycine soja GN=glysoja_007594 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 147 FKNGEKCDSVIGTMPKEFYVAAIERVLK 174

Query: 63  87
           
Sbjct: 207 174

BLAST of CU163435 vs. TrEMBL
Match: I1KM08_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G213700 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-06
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 146 FKNGEKCDSVIGTMPKEFYVAAIERVLK 173

Query: 63  87
           
Sbjct: 206 173

BLAST of CU163435 vs. NCBI nr
Match: gi|659109928|ref|XP_008454954.1| (PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-08
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLKQ 62
           FKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 137 FKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

Query: 63  90
           
Sbjct: 197 165

BLAST of CU163435 vs. NCBI nr
Match: gi|449438402|ref|XP_004136977.1| (PREDICTED: thioredoxin M3, chloroplastic [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-08
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLKQ 62
           FKNGEKCDSVIGTMPKDFYIAAVERVLKQ
Sbjct: 137 FKNGEKCDSVIGTMPKDFYIAAVERVLKQ 165

Query: 63  90
           
Sbjct: 197 165

BLAST of CU163435 vs. NCBI nr
Match: gi|734425345|gb|KHN43064.1| (Thioredoxin M3, chloroplastic [Glycine soja])

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-07
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 147 FKNGEKCDSVIGTMPKEFYVAAIERVLK 174

Query: 63  87
           
Sbjct: 207 174

BLAST of CU163435 vs. NCBI nr
Match: gi|351725753|ref|NP_001238639.1| (uncharacterized protein LOC100306680 [Glycine max])

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-07
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 143 FKNGEKCDSVIGTMPKEFYVAAIERVLK 170

Query: 63  87
           
Sbjct: 203 170

BLAST of CU163435 vs. NCBI nr
Match: gi|1021585371|ref|XP_016182020.1| (PREDICTED: thioredoxin M3, chloroplastic-like isoform X1 [Arachis ipaensis])

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-07
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 3   FKNGEKCDSVIGTMPKDFYIAAVERVLK 62
           FKNGEKCDSVIGTMPK+FY+AA+ERVLK
Sbjct: 154 FKNGEKCDSVIGTMPKEFYVAAIERVLK 181

Query: 63  87
           
Sbjct: 214 181

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K2M6_CUCSA2.1e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073610 PE=4 SV=1[more]
C6T0F3_SOYBN3.9e-0689.29Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A0R0J693_SOYBN3.9e-0689.29Uncharacterized protein OS=Glycine max GN=GLYMA_07G213700 PE=4 SV=1[more]
A0A0B2SFK3_GLYSO3.9e-0689.29Thioredoxin M3, chloroplastic OS=Glycine soja GN=glysoja_007594 PE=4 SV=1[more]
I1KM08_SOYBN3.9e-0689.29Uncharacterized protein OS=Glycine max GN=GLYMA_07G213700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659109928|ref|XP_008454954.1|3.5e-08100.00PREDICTED: thioredoxin M3, chloroplastic [Cucumis melo][more]
gi|449438402|ref|XP_004136977.1|3.5e-08100.00PREDICTED: thioredoxin M3, chloroplastic [Cucumis sativus][more]
gi|734425345|gb|KHN43064.1|8.7e-0789.29Thioredoxin M3, chloroplastic [Glycine soja][more]
gi|351725753|ref|NP_001238639.1|8.7e-0789.29uncharacterized protein LOC100306680 [Glycine max][more]
gi|1021585371|ref|XP_016182020.1|8.7e-0789.29PREDICTED: thioredoxin M3, chloroplastic-like isoform X1 [Arachis ipaensis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G073610Csa7G073610gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0072575H0072575EST