CU162920 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU162920
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description13-hydroperoxide lyase
LocationChr7 : 2307270 .. 2307447 (+)
Sequence length190
The following sequences are available for this feature:

transcribed_cluster sequence

TGGCGGGGGTGGTGTTTGTGGCTTACATATTTAAAAGGTATGATTCGATTGCTGGGGAAGGAGGTTCCATTACAGCTTTTCAAAGGGCTAATTGAAAAGTGAAAGTGAATTATATATACATTATGTATCGTTTATTGAGAGATGCTTACTTTTCTTGTTACAAGTGGTCTTCTTTCTTATGTATGTAGTT
BLAST of CU162920 vs. TrEMBL
Match: A0A0A0K5I0_CUCSA (13-hydroperoxide lyase OS=Cucumis sativus GN=Csa_7G041960 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.6e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 6   GVVFVAYIFKRYDSIAGEGGSITAFQRAN 65
           GVVFVAYIFKRYDSIAGEGGSITAFQRAN
Sbjct: 449 GVVFVAYIFKRYDSIAGEGGSITAFQRAN 477

Query: 66  93
           
Sbjct: 509 477

BLAST of CU162920 vs. TrEMBL
Match: Q8L5M6_CUCME (Fatty acid hydroperoxide metabolizing enzyme (Fragment) OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 9  VVFVAYIFKRYDSIAGEGGSITAFQRAN 68
          VVFVAYIFKRYDSIAGEGGSITAFQRAN
Sbjct: 70 VVFVAYIFKRYDSIAGEGGSITAFQRAN 97

Query: 69 93
          
Sbjct: 130 97

BLAST of CU162920 vs. NCBI nr
Match: gi|700188269|gb|KGN43502.1| (13-hydroperoxide lyase [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 6   GVVFVAYIFKRYDSIAGEGGSITAFQRAN 65
           GVVFVAYIFKRYDSIAGEGGSITAFQRAN
Sbjct: 449 GVVFVAYIFKRYDSIAGEGGSITAFQRAN 477

Query: 66  93
           
Sbjct: 509 477

BLAST of CU162920 vs. NCBI nr
Match: gi|449453517|ref|XP_004144503.1| (PREDICTED: linolenate hydroperoxide lyase, chloroplastic [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 7.2e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 3

Query: 6   GVVFVAYIFKRYDSIAGEGGSITAFQRAN 65
           GVVFVAYIFKRYDSIAGEGGSITAFQRAN
Sbjct: 453 GVVFVAYIFKRYDSIAGEGGSITAFQRAN 481

Query: 66  93
           
Sbjct: 513 481

BLAST of CU162920 vs. NCBI nr
Match: gi|21616111|gb|AAM66137.1|AF081953_1 (fatty acid hydroperoxide metabolizing enzyme [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 9  VVFVAYIFKRYDSIAGEGGSITAFQRAN 68
          VVFVAYIFKRYDSIAGEGGSITAFQRAN
Sbjct: 70 VVFVAYIFKRYDSIAGEGGSITAFQRAN 97

Query: 69 93
          
Sbjct: 130 97

BLAST of CU162920 vs. NCBI nr
Match: gi|659110879|ref|XP_008455458.1| (PREDICTED: allene oxide synthase [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 3

Query: 9   VVFVAYIFKRYDSIAGEGGSITAFQRAN 68
           VVFVAYIFKRYDSIAGEGGSITAFQRAN
Sbjct: 455 VVFVAYIFKRYDSIAGEGGSITAFQRAN 482

Query: 69  93
           
Sbjct: 515 482

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K5I0_CUCSA6.6e-07100.0013-hydroperoxide lyase OS=Cucumis sativus GN=Csa_7G041960 PE=3 SV=1[more]
Q8L5M6_CUCME3.3e-06100.00Fatty acid hydroperoxide metabolizing enzyme (Fragment) OS=Cucumis melo PE=2 SV=... [more]
Match NameE-valueIdentityDescription
gi|700188269|gb|KGN43502.1|7.2e-07100.0013-hydroperoxide lyase [Cucumis sativus][more]
gi|449453517|ref|XP_004144503.1|7.2e-07100.00PREDICTED: linolenate hydroperoxide lyase, chloroplastic [Cucumis sativus][more]
gi|21616111|gb|AAM66137.1|AF081953_13.6e-06100.00fatty acid hydroperoxide metabolizing enzyme [Cucumis melo][more]
gi|659110879|ref|XP_008455458.1|3.6e-06100.00PREDICTED: allene oxide synthase [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G041960Csa7G041960gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0067052H0067052EST