CU162321 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU162321
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
LocationChr1 : 27076389 .. 27076635 (-)
Sequence length247
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TAGTAACACCTACAATATTTTAATAAAAGGGCATTGTAAAGGCACGGAATCTGAAAGAGGCATGGTTTTTATATAAAGAAATGATTGAAAAAGGATATGTTCCCACTGTTACTTCATATAATGCACTTATAAAGGGGTTTTATAAGAAAAGAAAATTTTGGAAGCAAGGGGAACTTTTTGAAGAGATGAGAGGACATGGGTTGGTTGCTGATGGAGAAATATACAATTTCTTTGTTGACATGTGCTA
Homology
[Close]
BLAST of CU162321 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.8e-16
Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARN+KEAWFL++EM  KG+  +V++Y+ LIKGF K++KF +  E+F++MR  GL 
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLA 698

Query: 87  ADGEIYNFFVD 146
           AD EI++FF D
Sbjct: 699 ADKEIFDFFSD 709

Query: 147  206
           
Sbjct: 759  709

Query: 207  240
           
Sbjct: 819  709


HSP 2 Score: 37.7 bits (86), Expect = 7.0e-02
Identity = 21/64 (32.81%), Postives = 31/64 (48.44%), Query Frame = 3 

Query: 51  LKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGEIYNF 110
           +KEA  L   M  KGY P V SY+ ++ G+ +  +  K  +L E M+  GL  +  IY  
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321

Query: 111 FVDM 170
            + +
Sbjct: 322 IIGL 325

Query: 171  230
           
Sbjct: 382  325

Query: 231  243
           
Sbjct: 442  325


HSP 3 Score: 34.7 bits (78), Expect = 5.9e-01
Identity = 19/62 (30.65%), Postives = 25/62 (40.32%), Query Frame = 3 

Query: 51  LKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGEIYNF 110
           L EA   + EMI +G +P    Y  LI GF K+       + F EM    +  D   Y  
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 111 FV 170
            +
Sbjct: 392 II 393

Query: 171  230
           
Sbjct: 452  393

Query: 231  237
           
Sbjct: 512  393


HSP 4 Score: 34.7 bits (78), Expect = 5.9e-01
Identity = 21/70 (30.00%), Postives = 30/70 (42.86%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+ K  +L  A  L  EM + G  P + +YN+++ G  K     +  +L  E    GL A
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524

Query: 90  DGEIYNFFVD 149
           D   Y   +D
Sbjct: 525 DTVTYTTLMD 534

Query: 150  209
           
Sbjct: 585  534

Query: 210  240
           
Sbjct: 645  534


HSP 5 Score: 33.5 bits (75), Expect = 1.3e+00
Identity = 16/62 (25.81%), Postives = 29/62 (46.77%), Query Frame = 3 

Query: 51  LKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGEIYNF 110
           L++   L   M+ KG  P  T++N+L+K +  +        ++++M   G+  DG+ Y  
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 111 FV 170
            V
Sbjct: 637 LV 638

Query: 171  230
           
Sbjct: 697  638

Query: 231  237
           
Sbjct: 757  638

[Close]
BLAST of CU162321 vs. Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06
Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+  A  +KEA  L+ +M   G +P + SYNALI GF K +   +  EL  E++G G+  
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505

Query: 90  DGEIYNFFV 149
           D  +Y  F+
Sbjct: 506 DLLLYGTFI 514

Query: 150  209
           
Sbjct: 566  514

Query: 210  237
           
Sbjct: 626  514


HSP 2 Score: 36.6 bits (83), Expect = 1.6e-01
Identity = 20/69 (28.99%), Postives = 35/69 (50.72%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+ K   ++ A  L+++M++KG VP  T+Y +L+ G +K+    +   L ++M   G+  
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 681

Query: 90  DGEIYNFFV 149
           D   Y   V
Sbjct: 682 DLLAYTSLV 690

Query: 150  209
           
Sbjct: 742  690

Query: 210  237
           
Sbjct: 802  690


HSP 3 Score: 35.4 bits (80), Expect = 3.5e-01
Identity = 21/66 (31.82%), Postives = 31/66 (46.97%), Query Frame = 3 

Query: 39  KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGE 98
           K  NL +A+ L  EM++ G    V +Y ALI G     +  +  ELF +M   G++ +  
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473

Query: 99  IYNFFV 158
            YN  +
Sbjct: 474 SYNALI 479

Query: 159  218
           
Sbjct: 534  479

Query: 219  237
           
Sbjct: 594  479


HSP 4 Score: 34.3 bits (77), Expect = 7.7e-01
Identity = 21/67 (31.34%), Postives = 32/67 (47.76%), Query Frame = 3 

Query: 39  KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGE 98
           K  +++ A  L++EM  +G VP   +YN++I GF K  +       FEEM+      D  
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333

Query: 99  IYNFFVD 158
            YN  ++
Sbjct: 334 TYNALIN 340

Query: 159  218
           
Sbjct: 394  340

Query: 219  240
           
Sbjct: 454  340

[Close]
BLAST of CU162321 vs. Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-06
Identity = 22/68 (32.35%), Postives = 37/68 (54.41%), Query Frame = 3 

Query: 33  IVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVAD 92
           + K  N++ A  +++EM+ +GY P VT+YN LI+G +   +F +  EL + M   G   +
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369

Query: 93  GEIYNFFV 152
            + YN  +
Sbjct: 370 FQTYNMMI 377

Query: 153  212
           
Sbjct: 430  377

Query: 213  237
           
Sbjct: 490  377


HSP 2 Score: 40.4 bits (93), Expect = 1.1e-02
Identity = 23/69 (33.33%), Postives = 34/69 (49.28%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G   A  +K A  ++ EMI +G +P+V +YNA+I+   KK        +FEEM   G   
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333

Query: 90  DGEIYNFFV 149
           +   YN  +
Sbjct: 334 NVTTYNVLI 342

Query: 150  209
           
Sbjct: 394  342

Query: 210  237
           
Sbjct: 454  342


HSP 3 Score: 40.0 bits (92), Expect = 1.4e-02
Identity = 19/54 (35.19%), Postives = 27/54 (50.00%), Query Frame = 3 

Query: 75  KEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGEIYNFFV 134
           KEM+E+G  P +T+YN ++KGF++  +     E F EM+      D   Y   V
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272

Query: 135  194
           
Sbjct: 279  272

Query: 195  237
           
Sbjct: 339  272

[Close]
BLAST of CU162321 vs. TrEMBL
Match: A0A0A0LXZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G666450 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-28
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARNLKEAWFLYKEMIEKGYVPTVTSYNALIK FYKK+K  +  ELFEEMRGHGLV
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710

Query: 87  ADGEIYNFFVDMC 146
           ADGEIYNFFVDMC
Sbjct: 711 ADGEIYNFFVDMC 723

Query: 147  206
           
Sbjct: 771  723

Query: 207  246
           
Sbjct: 831  723

[Close]
BLAST of CU162321 vs. TrEMBL
Match: A0A0A0LXZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G666450 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-08
Identity = 40/94 (42.55%), Postives = 46/94 (48.94%), Query Frame = 3 

Query: 69  LYKEMIEKGYVPTVTSYNALIKGFYKKR-----------------------------KFW 128
           +YK M  +G  P   +YN LIKG  K R                             +F+
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 129 KQ------GELFEEMRGHGLVADGEIYNFFVDMC 188
           K+       ELFEEMRGHGLVADGEIYNFFVDMC
Sbjct: 690 KKKKILEARELFEEMRGHGLVADGEIYNFFVDMC 723

Query: 189  246
           
Sbjct: 750  723


HSP 2 Score: 46.6 bits (109), Expect = 1.7e-02
Identity = 25/67 (37.31%), Postives = 36/67 (53.73%), Query Frame = 3 

Query: 39  KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGE 98
           KA  +  A+ L+ EM++ G  P + +Y ALI G  K  +     EL +EMR  GL  +  
Sbjct: 445 KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVC 504

Query: 99  IYNFFVD 158
           IYN  V+
Sbjct: 505 IYNSMVN 511

Query: 159  218
           
Sbjct: 565  511

Query: 219  240
           
Sbjct: 625  511


HSP 3 Score: 37.4 bits (85), Expect = 1.0e+01
Identity = 16/52 (30.77%), Postives = 26/52 (50.00%), Query Frame = 3 

Query: 81  MIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGEIYNFFV 140
           M+EKG VP   +YN L+K    +       ++++ MR  G+  D   YN  +
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 141  200
           
Sbjct: 659  650

Query: 201  237
           
Sbjct: 719  650


HSP 4 Score: 34.7 bits (78), Expect = 6.6e+01
Identity = 19/60 (31.67%), Postives = 30/60 (50.00%), Query Frame = 3 

Query: 48  NLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVADGEIYN 107
           ++ +A  L +EM+++G  PTV ++N L+ GF           L   M   G+V D   YN
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYN 612

Query: 108  167
           
Sbjct: 613  612

Query: 168  227
           
Sbjct: 673  612


HSP 5 Score: 34.7 bits (78), Expect = 6.7e+01
Identity = 26/63 (41.27%), Postives = 31/63 (49.21%), Query Frame = 2 

Query: 2   SNTYNILIKGHCKGTESERGMV----FI*RND*KRICSHCYFI*CTYKGVL*EKKILEAR 61
           SNTYNILIKGHCK    +         I +     + S+   I   YK    +KKILEAR
Sbjct: 643 SNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYK----KKKILEAR 701

Query: 62  GTF 121
             F
Sbjct: 703 ELF 701

Query: 122  179
           
Sbjct: 763  701


HSP 6 Score: 106.3 bits (264), Expect = 1.8e-20
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           +G  KARN+KEAWFL++EMI KGY+PT +SYNALIKG  KK+KF +  +LFEEMR HGLV
Sbjct: 609 RGHSKARNMKEAWFLHREMIGKGYIPTASSYNALIKGLLKKKKFSEARQLFEEMRTHGLV 668

Query: 87  ADGEIYNFFVDM 146
            D EIYN FVDM
Sbjct: 669 VDREIYNAFVDM 680

Query: 147  206
           
Sbjct: 729  680

Query: 207  243
           
Sbjct: 789  680

[Close]
BLAST of CU162321 vs. TrEMBL
Match: A0A059AI54_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02985 PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 9.2e-01
Identity = 22/70 (31.43%), Postives = 33/70 (47.14%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+ K  N   A+ L+ +M  +G  P   +Y ALI G  +  K  +  +LF+EM   G   
Sbjct: 330 GLCKLGNFVAAFSLFGKMQSQGVAPDSVTYTALISGLCQNGKLMEANKLFDEMIDCGFKP 389

Query: 90  DGEIYNFFVD 149
           D   Y   +D
Sbjct: 390 DEVTYTTLID 399

Query: 150  209
           
Sbjct: 450  399

Query: 210  240
           
Sbjct: 510  399


HSP 2 Score: 34.3 bits (77), Expect = 8.6e+01
Identity = 22/70 (31.43%), Postives = 32/70 (45.71%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+ +   L EA  L+ EMI+ G+ P   +Y  LI G+ K  +  K   L  +M   GL  
Sbjct: 365 GLCQNGKLMEANKLFDEMIDCGFKPDEVTYTTLIDGYGKAGEMAKAFSLHNQMVKIGLTP 424

Query: 90  DGEIYNFFVD 149
           +   Y    D
Sbjct: 425 NIVTYTALAD 434

Query: 150  209
           
Sbjct: 485  434

Query: 210  240
           
Sbjct: 545  434


HSP 3 Score: 104.8 bits (260), Expect = 5.2e-20
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARN+KEAWFL+KEM  KG++PT + Y+ALIKG +KKRKF +  ELFEEMR HG+V
Sbjct: 611 KGHCKARNMKEAWFLHKEMAGKGFIPTASCYSALIKGLFKKRKFAEARELFEEMRRHGVV 670

Query: 87  ADGEIYNFFVDM 146
           AD E YN FVDM
Sbjct: 671 ADRETYNIFVDM 682

Query: 147  206
           
Sbjct: 731  682

Query: 207  243
           
Sbjct: 791  682

[Close]
BLAST of CU162321 vs. TrEMBL
Match: M5WZR8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002121mg PE=4 SV=1)

HSP 1 Score: 40.0 bits (92), Expect = 1.6e+00
Identity = 20/69 (28.99%), Postives = 34/69 (49.28%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G   +  L++   L K M+EKG VP   +YN+L+K +  +       +++  M   G+V 
Sbjct: 542 GFCMSGMLEDGERLLKWMLEKGIVPNAGTYNSLMKQYCIRNNMRTTTDMYRSMCAGGVVP 601

Query: 90  DGEIYNFFV 149
           D   YN  +
Sbjct: 602 DNNTYNILI 610

Query: 150  209
           
Sbjct: 662  610

Query: 210  237
           
Sbjct: 722  610


HSP 2 Score: 35.8 bits (81), Expect = 3.0e+01
Identity = 21/68 (30.88%), Postives = 30/68 (44.12%), Query Frame = 3 

Query: 33  IVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVAD 92
           + K   L EA  + +EM+  G +P    Y  LI GF K         LF+EMR   ++ D
Sbjct: 333 LCKTGKLSEAEVILREMMALGVLPDNVVYTTLIDGFCKMGNIQAACRLFDEMRLRKVIPD 392

Query: 93  GEIYNFFV 152
              Y   +
Sbjct: 393 YITYTAII 400

Query: 153  212
           
Sbjct: 453  400

Query: 213  237
           
Sbjct: 513  400


HSP 3 Score: 32.3 bits (72), Expect = 3.3e+02
Identity = 20/59 (33.90%), Postives = 25/59 (42.37%), Query Frame = 2 

Query: 2   SNTYNILIKGHCKGTESERGMVFI*RND*KRICSHCYFI*CTYKGVL*EKKILEARGTF 61
           +NTYNILIKGHCK    +           K             KG+  ++K  EAR  F
Sbjct: 603 NNTYNILIKGHCKARNMKEAWFLHKEMAGKGFIPTASCYSALIKGLFKKRKFAEARELF 661

Query: 62   121
           
Sbjct: 663  661

Query: 122  179
           
Sbjct: 723  661


HSP 4 Score: 101.7 bits (252), Expect = 4.4e-19
Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARN+KEAWFL+KEM+EKG+  T  SYN+LIKGFYK++KF +  +LFEEMR HG +
Sbjct: 645 KGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704

Query: 87  ADGEIYNFFVDM 146
           A+ EIY+ FVD+
Sbjct: 705 AEKEIYDIFVDV 716

Query: 147  206
           
Sbjct: 765  716

Query: 207  243
           
Sbjct: 825  716

[Close]
BLAST of CU162321 vs. TrEMBL
Match: A0A0R0IUH4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G294400 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.4e-03
Identity = 32/100 (32.00%), Postives = 43/100 (43.00%), Query Frame = 3 

Query: 48  NLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKR------------------------- 107
           N++    +YK M  +G VP   +YN LIKG  K R                         
Sbjct: 617 NMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYN 676

Query: 108 ----------KFWKQGELFEEMRGHGLVADGEIYNFFVDM 167
                     KF +  +LFEEMR HG +A+ EIY+ FVD+
Sbjct: 677 SLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDV 716

Query: 168  227
           
Sbjct: 737  716

Query: 228  243
           
Sbjct: 797  716


HSP 2 Score: 47.8 bits (112), Expect = 7.5e-03
Identity = 26/70 (37.14%), Postives = 37/70 (52.86%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G  KA  +KEA+ L+ +M+EKG  P V +Y AL+ G  K  +     EL  EM   GL  
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495

Query: 90  DGEIYNFFVD 149
           +   YN  ++
Sbjct: 496 NVCTYNALIN 505

Query: 150  209
           
Sbjct: 556  505

Query: 210  240
           
Sbjct: 616  505


HSP 3 Score: 39.3 bits (90), Expect = 2.7e+00
Identity = 26/70 (37.14%), Postives = 32/70 (45.71%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+ K   +  A  L  EM EKG  P V +YNALI G  K     +  +L EEM   G   
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530

Query: 90  DGEIYNFFVD 149
           D   Y   +D
Sbjct: 531 DTITYTTIMD 540

Query: 150  209
           
Sbjct: 591  540

Query: 210  240
           
Sbjct: 651  540


HSP 4 Score: 38.9 bits (89), Expect = 3.5e+00
Identity = 23/70 (32.86%), Postives = 34/70 (48.57%), Query Frame = 3 

Query: 30  GIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLVA 89
           G+ +A  + EA  L+ EM+ KG  P   +Y ALI G+ K  +  +   L  +M   GL  
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460

Query: 90  DGEIYNFFVD 149
           +   Y   VD
Sbjct: 461 NVVTYTALVD 470

Query: 150  209
           
Sbjct: 521  470

Query: 210  240
           
Sbjct: 581  470


HSP 5 Score: 31.6 bits (70), Expect = 5.6e+02
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2 

Query: 2   SNTYNILIKGHCK 41
           +NTYNILIKGHCK
Sbjct: 637 TNTYNILIKGHCK 649


HSP 6 Score: 101.7 bits (252), Expect = 4.4e-19
Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARN+KEAWFL+KEM+EKG+  T  SYN+LIKGFYK++KF +  +LFEEMR HG +
Sbjct: 645 KGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704

Query: 87  ADGEIYNFFVDM 146
           A+ EIY+ FVD+
Sbjct: 705 AEKEIYDIFVDV 716

Query: 147  206
           
Sbjct: 765  716

Query: 207  243
           
Sbjct: 825  716

[Close]
BLAST of CU162321 vs. NCBI nr
Match: gi|778664250|ref|XP_011660255.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARNLKEAWFLYKEMIEKGYVPTVTSYNALIK FYKK+K  +  ELFEEMRGHGLV
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710

Query: 87  ADGEIYNFFVDMC 146
           ADGEIYNFFVDMC
Sbjct: 711 ADGEIYNFFVDMC 723

Query: 147  206
           
Sbjct: 771  723

Query: 207  246
           
Sbjct: 831  723

[Close]
BLAST of CU162321 vs. NCBI nr
Match: gi|659086087|ref|XP_008443757.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-26
Identity = 59/72 (81.94%), Postives = 63/72 (87.50%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARNL+EAWFLYKEMIEKGYVPTVTSYNALIK  YK++K  +  ELFEEMRGHGLV
Sbjct: 651 KGHCKARNLREAWFLYKEMIEKGYVPTVTSYNALIKRLYKRKKILEARELFEEMRGHGLV 710

Query: 87  ADGEIYNFFVDM 146
           A GEIYNFFVDM
Sbjct: 711 AAGEIYNFFVDM 722

Query: 147  206
           
Sbjct: 771  722

Query: 207  243
           
Sbjct: 831  722

[Close]
BLAST of CU162321 vs. NCBI nr
Match: gi|629087370|gb|KCW53727.1| (hypothetical protein EUGRSUZ_J02985 [Eucalyptus grandis])

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-21
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           +G  KARN+KEAWFL++EMI KGY+PT +SYNALIKG  KK+KF +  +LFEEMR HGLV
Sbjct: 609 RGHSKARNMKEAWFLHREMIGKGYIPTASSYNALIKGLLKKKKFSEARQLFEEMRTHGLV 668

Query: 87  ADGEIYNFFVDM 146
            D EIYN FVDM
Sbjct: 669 VDREIYNAFVDM 680

Query: 147  206
           
Sbjct: 729  680

Query: 207  243
           
Sbjct: 789  680

[Close]
BLAST of CU162321 vs. NCBI nr
Match: gi|702484017|ref|XP_010033877.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Eucalyptus grandis])

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-21
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           +G  KARN+KEAWFL++EMI KGY+PT +SYNALIKG  KK+KF +  +LFEEMR HGLV
Sbjct: 648 RGHSKARNMKEAWFLHREMIGKGYIPTASSYNALIKGLLKKKKFSEARQLFEEMRTHGLV 707

Query: 87  ADGEIYNFFVDM 146
            D EIYN FVDM
Sbjct: 708 VDREIYNAFVDM 719

Query: 147  206
           
Sbjct: 768  719

Query: 207  243
           
Sbjct: 828  719

[Close]
BLAST of CU162321 vs. NCBI nr
Match: gi|595893472|ref|XP_007213619.1| (hypothetical protein PRUPE_ppa002121mg [Prunus persica])

HSP 1 Score: 108.2 bits (269), Expect = 6.7e-21
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 3 

Query: 27  KGIVKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKGFYKKRKFWKQGELFEEMRGHGLV 86
           KG  KARN+KEAWFL+KEM  KG++PT + Y+ALIKG +KKRKF +  ELFEEMR HG+V
Sbjct: 611 KGHCKARNMKEAWFLHKEMAGKGFIPTASCYSALIKGLFKKRKFAEARELFEEMRRHGVV 670

Query: 87  ADGEIYNFFVDM 146
           AD E YN FVDM
Sbjct: 671 ADRETYNIFVDM 682

Query: 147  206
           
Sbjct: 731  682

Query: 207  243
           
Sbjct: 791  682

The following BLAST results are available for this feature:
BLAST of CU162321 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR12_ARATH3.8e-1654.93Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP143_ARATH2.7e-0637.68Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
PP125_ARATH3.6e-0632.35Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
BLAST of CU162321 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXZ2_CUCSA1.0e-2887.67Uncharacterized protein OS=Cucumis sativus GN=Csa_1G666450 PE=4 SV=1[more]
A0A0A0LXZ2_CUCSA3.5e-0842.55Uncharacterized protein OS=Cucumis sativus GN=Csa_1G666450 PE=4 SV=1[more]
A0A059AI54_EUCGR9.2e-0131.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02985 PE=4 SV=1[more]
M5WZR8_PRUPE1.6e+0028.99Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002121mg PE=4 SV=1[more]
A0A0R0IUH4_SOYBN4.4e-0332.00Uncharacterized protein OS=Glycine max GN=GLYMA_08G294400 PE=4 SV=1[more]
BLAST of CU162321 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664250|ref|XP_011660255.1|1.4e-2987.67PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial ... [more]
gi|659086087|ref|XP_008443757.1|3.1e-2681.94PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial ... [more]
gi|629087370|gb|KCW53727.1|2.3e-2169.44hypothetical protein EUGRSUZ_J02985 [Eucalyptus grandis][more]
gi|702484017|ref|XP_010033877.1|2.3e-2169.44PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial ... [more]
gi|595893472|ref|XP_007213619.1|6.7e-2168.06hypothetical protein PRUPE_ppa002121mg [Prunus persica][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G666450Csa1G666450gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0060394H0060394EST