CU161578 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU161578
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCalcium-binding EF-hand family protein
LocationChr4 : 14429476 .. 14429561 (-)
Sequence length108
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GAGCTTCACGGGGTTTTTAGATCAATAGGAGATGAGCGGTGCACGTTAGAGGATTGCGGGCGTATGATAAGGGATGAGGAAGAGACACATGAAGAAAAGCTCGAGCGG
Homology
[Close]
BLAST of CU161578 vs. TrEMBL
Match: A0A0A0L0H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G355130 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-06
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 1 

Query: 1   ELHGVFRSIGDERCTLEDCGRMIRDEEE 60
           ELHGVFRSIGDERCTLEDCGRMIRD +E
Sbjct: 146 ELHGVFRSIGDERCTLEDCGRMIRDVDE 173

Query: 61   85
           
Sbjct: 206  173

[Close]
BLAST of CU161578 vs. NCBI nr
Match: gi|449467126|ref|XP_004151276.1| (PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 2.1e-06
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 1 

Query: 1   ELHGVFRSIGDERCTLEDCGRMIRDEEE 60
           ELHGVFRSIGDERCTLEDCGRMIRD +E
Sbjct: 146 ELHGVFRSIGDERCTLEDCGRMIRDVDE 173

Query: 61   85
           
Sbjct: 206  173

The following BLAST results are available for this feature:
BLAST of CU161578 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0H1_CUCSA1.1e-0692.86Uncharacterized protein OS=Cucumis sativus GN=Csa_4G355130 PE=4 SV=1[more]
BLAST of CU161578 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449467126|ref|XP_004151276.1|2.1e-0692.86PREDICTED: probable calcium-binding protein CML36 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G355130Csa4G355130gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0052427H0052427EST