CU161449 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU161449
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 11282031 .. 11282260 (-)
Sequence length229
The following sequences are available for this feature:

transcribed_cluster sequence

GAGAGGTAGTAGTAGTCCGTGGCAATGGGAATGTGGATTCGACAAATATGAGAAGACGCTTACAAACTGTGGGTAAGGACACACCTCAACGAAAGAGACATATTTAGTAAAACAGATAAAGATTTGGAAAACTATGATTAGTTAGAACGAACATAATTGAGAAGATGGGTTTAAGGTTAGGTGGGAAAATGATTTTGGTGGAAGATAGTTGATGTATTTATGCATTCAC
BLAST of CU161449 vs. TrEMBL
Match: A0A0A0L0N0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G290730 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.5e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 3

Query: 3   EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI 62
           EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI
Sbjct: 428 EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI 461

Query: 63  105
           
Sbjct: 488 461

BLAST of CU161449 vs. NCBI nr
Match: gi|778693140|ref|XP_011653584.1| (PREDICTED: uncharacterized protein LOC101212475 isoform X2 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 3

Query: 3   EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI 62
           EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI
Sbjct: 428 EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI 461

Query: 63  105
           
Sbjct: 488 461

BLAST of CU161449 vs. NCBI nr
Match: gi|778693136|ref|XP_011653583.1| (PREDICTED: uncharacterized protein LOC101212475 isoform X1 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 6.4e-10
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 3

Query: 3   EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI 62
           EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI
Sbjct: 429 EVVVVRGNGNVDSTNMRRRLQTVGKDTPQRKRHI 462

Query: 63  105
           
Sbjct: 489 462

BLAST of CU161449 vs. NCBI nr
Match: gi|659097651|ref|XP_008449739.1| (PREDICTED: uncharacterized protein LOC103491531 [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 7.4e-06
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 3

Query: 9   VVVRGNG--NVDSTNMRRRLQTVGKDTPQRKRHI 68
           VVVRGNG  NVDSTNMRRRLQTV KDTPQRKR+I
Sbjct: 432 VVVRGNGNGNVDSTNMRRRLQTVAKDTPQRKRNI 465

Query: 69  105
           
Sbjct: 492 465

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L0N0_CUCSA4.5e-10100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G290730 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778693140|ref|XP_011653584.1|6.4e-10100.00PREDICTED: uncharacterized protein LOC101212475 isoform X2 [Cucumis sativus][more]
gi|778693136|ref|XP_011653583.1|6.4e-10100.00PREDICTED: uncharacterized protein LOC101212475 isoform X1 [Cucumis sativus][more]
gi|659097651|ref|XP_008449739.1|7.4e-0688.24PREDICTED: uncharacterized protein LOC103491531 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G290730Csa4G290730gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0050971H0050971EST