CU161234 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU161234
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 8673819 .. 8674059 (-)
Sequence length239
The following sequences are available for this feature:

transcribed_cluster sequence

AATTGTTGAGAGATCAGCATAGGTTGTGTAATCCACAATTTTTGCCCCAAATGACTTCATTACACGACCACCTTCTTCTACAGCCTTGTGAAGCCCTGCTTCATCTGTTTTTTCGTTACTAATGTTTAGAACCACATTTTTTCTGCGTACGAATCTAAAACTTGGGGCTTTATTTTAAATCCTGTCACCCGAACAATGTCGCCCATGCAATAACGGTACAGCCCAGCAATAATATAGTA
BLAST of CU161234 vs. Swiss-Prot
Match: GH34_ARATH (Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.3e-12
Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           N AP F+F+RR+NV+L+I ++KTDEA L KAVE   R++   G ++++YT+YAD  TI
Sbjct: 423 NSAPQFKFIRRENVLLSIESDKTDEADLQKAVENASRLLAEQGTRVIEYTSYADTKTI 480

Query: 61  120
           
Sbjct: 483 480

Query: 121 175
           
Sbjct: 543 480


HSP 2 Score: 33.1 bits (74), Expect = 1.7e+00
Identity = 14/17 (82.35%), Postives = 14/17 (82.35%), Query Frame = -1

Query: 177 AGLYRYCMGDIVRVTGF 228
           AGLYRY +GDI+RVTGF
Sbjct: 405 AGLYRYRVGDILRVTGF 421

BLAST of CU161234 vs. Swiss-Prot
Match: GH32_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japonica GN=GH3.2 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-11
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           N AP FRFVRRKNV+L+I ++KTDEA L  AVE    ++  +GA IV+YT+ AD +TI
Sbjct: 437 NAAPQFRFVRRKNVLLSIDSDKTDEAELQAAVERASALLSPYGASIVEYTSQADATTI 494

Query: 61  120
           
Sbjct: 497 494

Query: 121 175
           
Sbjct: 557 494

BLAST of CU161234 vs. Swiss-Prot
Match: GH32_ARATH (Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-11
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           N AP F+F+RRKNV+L++ ++KTDEA L KAVE   R+    G ++++YT+YA+  TI
Sbjct: 429 NSAPQFKFIRRKNVLLSVESDKTDEAELQKAVENASRLFAEQGTRVIEYTSYAETKTI 486

Query: 61  120
           
Sbjct: 489 486

Query: 121 175
           
Sbjct: 549 486


HSP 2 Score: 33.1 bits (74), Expect = 1.7e+00
Identity = 14/17 (82.35%), Postives = 14/17 (82.35%), Query Frame = -1

Query: 177 AGLYRYCMGDIVRVTGF 228
           AGLYRY +GDI+RVTGF
Sbjct: 411 AGLYRYRVGDILRVTGF 427

BLAST of CU161234 vs. Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-11
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = -3

Query: 4   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLST 63
           N AP F FVRRKNV L+I ++KTDEA LH AV E  + +  FGA +V+YT+YAD +T
Sbjct: 434 NAAPMFAFVRRKNVALSIDSDKTDEAELHAAVTEAVQHLAPFGASLVEYTSYADTAT 490

Query: 64  123
           
Sbjct: 494 490

Query: 124 175
           
Sbjct: 554 490


HSP 2 Score: 31.6 bits (70), Expect = 4.9e+00
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = -1

Query: 174 AGLYRYCMGDIVRVTGFK 228
           +GLYRY +GD++RV GFK
Sbjct: 416 SGLYRYRVGDVLRVAGFK 433

BLAST of CU161234 vs. Swiss-Prot
Match: GH31_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japonica GN=GH3.1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-10
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           NKAP F FVRR+NV L++ ++KTDE  LH AV    + +  FGA +V+YT+YAD +TI
Sbjct: 426 NKAPMFSFVRRQNVALSVDSDKTDETELHAAVSGAVQHLAPFGASLVEYTSYADAATI 483

Query: 61  120
           
Sbjct: 486 483

Query: 121 175
           
Sbjct: 546 483


HSP 2 Score: 32.3 bits (72), Expect = 2.9e+00
Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = -1

Query: 168 AGLYRYCMGDIVRVTGFKIK 227
           +GLYRY +GD++RV GFK K
Sbjct: 408 SGLYRYRVGDVLRVAGFKNK 427

BLAST of CU161234 vs. TrEMBL
Match: A0A0A0KAF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G125240 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-24
Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = -3

Query: 1   RHCSGDRI*-----NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI 60
           R+C GD +      NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI
Sbjct: 405 RYCMGDIVRVTGFKNKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI 464

Query: 61  VDYTTYADLSTI 120
           VDYTTYADLSTI
Sbjct: 465 VDYTTYADLSTI 476

Query: 121 180
           
Sbjct: 525 476

Query: 181 202
           
Sbjct: 585 476

BLAST of CU161234 vs. TrEMBL
Match: A0A0A0KAF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G125240 PE=4 SV=1)

HSP 1 Score: 43.1 bits (100), Expect = 1.8e-01
Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = -1

Query: 168 AGLYRYCMGDIVRVTGFKIK 227
           AGLYRYCMGDIVRVTGFK K
Sbjct: 401 AGLYRYCMGDIVRVTGFKNK 420


HSP 2 Score: 79.0 bits (193), Expect = 3.0e-12
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           NKAP F FVRRKNVVLN+  EKT+E  L   VE  G V+K FGA IVDYT+YAD STI
Sbjct: 420 NKAPKFSFVRRKNVVLNLEYEKTNETDLRMGVENAGGVLKPFGATIVDYTSYADTSTI 477

Query: 61  120
           
Sbjct: 480 477

Query: 121 175
           
Sbjct: 540 477

BLAST of CU161234 vs. TrEMBL
Match: A0A0A0LHA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G081190 PE=4 SV=1)

HSP 1 Score: 32.3 bits (72), Expect = 3.2e+02
Identity = 15/20 (75.00%), Postives = 16/20 (80.00%), Query Frame = -1

Query: 168 AGLYRYCMGDIVRVTGFKIK 227
           AGLYR  +GDIVRVTGF  K
Sbjct: 402 AGLYRCSLGDIVRVTGFTNK 421


HSP 2 Score: 76.3 bits (186), Expect = 1.9e-11
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           NKAP FRFVRRKNV+L+I ++KTDEA LHKAVE    +++ F   +V+YT+YA+  TI
Sbjct: 424 NKAPQFRFVRRKNVLLSIESDKTDEAELHKAVENASLLLREFNTSVVEYTSYAETKTI 481

Query: 61  120
           
Sbjct: 484 481

Query: 121 175
           
Sbjct: 544 481

BLAST of CU161234 vs. TrEMBL
Match: A0A0D2SMB3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G234200 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-10
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           N AP F FVRRKNV+L+I ++KTDEA L KAVE   R+++ F   +V+YT+YAD  TI
Sbjct: 425 NSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASRLLREFNTSVVEYTSYADTKTI 482

Query: 61  120
           
Sbjct: 485 482

Query: 121 175
           
Sbjct: 545 482

BLAST of CU161234 vs. TrEMBL
Match: A0A0D2SMB3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G234200 PE=4 SV=1)

HSP 1 Score: 29.6 bits (65), Expect = 2.1e+03
Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = -1

Query: 177 AGLYRYCMGDIVRVTGF 228
           AGL RY +GDI+RVTGF
Sbjct: 407 AGLCRYRVGDILRVTGF 423


HSP 2 Score: 73.2 bits (178), Expect = 1.6e-10
Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           N AP F FVRRKNV+L+I ++KTDEA L  AVE   ++++SF A +V+YT+YAD +TI
Sbjct: 424 NSAPQFHFVRRKNVLLSIDSDKTDEAELQLAVENASKLLRSFNASVVEYTSYADTTTI 481

Query: 61  120
           
Sbjct: 484 481

Query: 121 175
           
Sbjct: 544 481

BLAST of CU161234 vs. NCBI nr
Match: gi|449444564|ref|XP_004140044.1| (PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-25
Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = -3

Query: 1   RHCSGDRI*-----NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI 60
           R+C GD +      NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI
Sbjct: 405 RYCMGDIVRVTGFKNKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI 464

Query: 61  VDYTTYADLSTI 120
           VDYTTYADLSTI
Sbjct: 465 VDYTTYADLSTI 476

Query: 121 180
           
Sbjct: 525 476

Query: 181 202
           
Sbjct: 585 476

BLAST of CU161234 vs. NCBI nr
Match: gi|659094768|ref|XP_008448232.1| (PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-22
Identity = 57/72 (79.17%), Postives = 61/72 (84.72%), Query Frame = -3

Query: 1   RHCSGDRI*-----NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI 60
           R+C GD +      NKAP+F FVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMK FGA I
Sbjct: 404 RYCMGDVVRVTGFKNKAPNFSFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKQFGATI 463

Query: 61  VDYTTYADLSTI 120
           VDYTTYAD+STI
Sbjct: 464 VDYTTYADISTI 475

Query: 121 180
           
Sbjct: 524 475

Query: 181 202
           
Sbjct: 584 475

BLAST of CU161234 vs. NCBI nr
Match: gi|659082377|ref|XP_008441807.1| (PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like [Cucumis melo])

HSP 1 Score: 81.6 bits (200), Expect = 6.6e-13
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = -3

Query: 1   RHCSGDRI*-----NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKI 60
           R+C GD +      NKAP F FVRRKNV+LN+  EKT+E+ L   VE+ G V+K FGA I
Sbjct: 407 RYCIGDILRVTGFTNKAPKFSFVRRKNVILNLEYEKTNESDLRLGVEKAGGVLKPFGATI 466

Query: 61  VDYTTYADLSTI 120
           VDYT YAD STI
Sbjct: 467 VDYTCYADTSTI 478

Query: 121 180
           
Sbjct: 527 478

Query: 181 202
           
Sbjct: 587 478

BLAST of CU161234 vs. NCBI nr
Match: gi|778668015|ref|XP_011649024.1| (PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like isoform X2 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-12
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           NKAP F FVRRKNVVLN+  EKT+E  L   VE  G V+K FGA IVDYT+YAD STI
Sbjct: 406 NKAPKFSFVRRKNVVLNLEYEKTNETDLRMGVENAGGVLKPFGATIVDYTSYADTSTI 463

Query: 61  120
           
Sbjct: 466 463

Query: 121 175
           
Sbjct: 526 463

BLAST of CU161234 vs. NCBI nr
Match: gi|449442409|ref|XP_004138974.1| (PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like isoform X1 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-12
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = -3

Query: 1   NKAPSFRFVRRKNVVLNISNEKTDEAGLHKAVEEGGRVMKSFGAKIVDYTTYADLSTI 60
           NKAP F FVRRKNVVLN+  EKT+E  L   VE  G V+K FGA IVDYT+YAD STI
Sbjct: 420 NKAPKFSFVRRKNVVLNLEYEKTNETDLRMGVENAGGVLKPFGATIVDYTSYADTSTI 477

Query: 61  120
           
Sbjct: 480 477

Query: 121 175
           
Sbjct: 540 477

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GH34_ARATH7.3e-1251.72Indole-3-acetic acid-amido synthetase GH3.4 OS=Arabidopsis thaliana GN=GH3.4 PE=... [more]
GH32_ORYSJ1.6e-1156.90Probable indole-3-acetic acid-amido synthetase GH3.2 OS=Oryza sativa subsp. japo... [more]
GH32_ARATH2.1e-1150.00Indole-3-acetic acid-amido synthetase GH3.2 OS=Arabidopsis thaliana GN=GH3.2 PE=... [more]
GH34_ORYSJ2.8e-1157.89Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japo... [more]
GH31_ORYSJ1.0e-1053.45Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Oryza sativa subsp. japo... [more]
Match NameE-valueIdentityDescription
A0A0A0KAF9_CUCSA1.5e-2486.11Uncharacterized protein OS=Cucumis sativus GN=Csa_6G125240 PE=4 SV=1[more]
A0A0A0KAF9_CUCSA1.8e-0195.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G125240 PE=4 SV=1[more]
A0A0A0LHA0_CUCSA3.2e+0275.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G081190 PE=4 SV=1[more]
A0A0D2SMB3_GOSRA1.2e-1056.90Uncharacterized protein OS=Gossypium raimondii GN=B456_005G234200 PE=4 SV=1[more]
A0A0D2SMB3_GOSRA2.1e+0376.47Uncharacterized protein OS=Gossypium raimondii GN=B456_005G234200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449444564|ref|XP_004140044.1|7.5e-2586.11PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Cucumis sativus][more]
gi|659094768|ref|XP_008448232.1|2.0e-2279.17PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Cucumis melo][more]
gi|659082377|ref|XP_008441807.1|6.6e-1358.33PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like [Cucumis melo][more]
gi|778668015|ref|XP_011649024.1|2.5e-1267.24PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like isoform X2 [Cucumis ... [more]
gi|449442409|ref|XP_004138974.1|2.5e-1267.24PREDICTED: indole-3-acetic acid-amido synthetase GH3.5-like isoform X1 [Cucumis ... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G125240Csa6G125240gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0048517H0048517EST