CU161145 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU161145
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 15417864 .. 15418013 (+)
Sequence length150
The following sequences are available for this feature:

transcribed_cluster sequence

TCAGACCTCATTCTCATCGATCAACCAAGAATTGGCAATCGGTTATGGAAGAAATCGAGCGAATTCACAACAAAAAGAAAAATCCAATTCGAAATCAAAATCCTTTCGGTTTCAAGAGAGAAATTGTTAATTTTCCTCTCGTGTTTACGG
BLAST of CU161145 vs. TrEMBL
Match: A0A0A0LMI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345900 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.8e-18
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 3

Query: 3   RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF 62
           RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF
Sbjct: 81  RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF 124

Query: 63  122
           
Sbjct: 141 124

Query: 123 135
           
Sbjct: 201 124

BLAST of CU161145 vs. NCBI nr
Match: gi|778670370|ref|XP_004143011.2| (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-like [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 3.6e-17
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 3

Query: 3   RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF 62
           RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF
Sbjct: 81  RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF 124

Query: 63  122
           
Sbjct: 141 124

Query: 123 135
           
Sbjct: 201 124

BLAST of CU161145 vs. NCBI nr
Match: gi|659089129|ref|XP_008445342.1| (PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 3.9e-16
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 3

Query: 3   RPHSHRSTKNWQSVMEEIERIHNKKKNPIRNQNPFGFKREIVNF 62
           RPH+HRSTKNWQSVMEEIERIHNKKKNPIRNQNP GFKREIVNF
Sbjct: 81  RPHAHRSTKNWQSVMEEIERIHNKKKNPIRNQNPLGFKREIVNF 124

Query: 63  122
           
Sbjct: 141 124

Query: 123 135
           
Sbjct: 201 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LMI6_CUCSA3.8e-18100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778670370|ref|XP_004143011.2|3.6e-17100.00PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-like [Cuc... [more]
gi|659089129|ref|XP_008445342.1|3.9e-1695.45PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G345900Csa2G345900gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0047501H0047501EST