CU160975 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU160975
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGDSL esterase/lipase
LocationChr6 : 21502679 .. 21502910 (-)
Sequence length234
The following sequences are available for this feature:

transcribed_cluster sequence

AGAGTTGGGTTATTAAAGTTCAAGACCCCATTAAAGCCATGTTGTTTTGGGGTGAGCAGTGAGTTTGAATGTGGGAGTGTGGATGAACAAGGGAATAAAAAATTTAGTAGTTATGTAATGATCCCAAATCAGCTTTCTTTTGGGATTCTGTTCATCCCACTCAAACAGGATGGGCTCATGCATTTTCCTCTTTTACATCATTTCTCTAATCACTATTTTGATATACATAAAGTT
BLAST of CU160975 vs. Swiss-Prot
Match: GDL71_ARATH (GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 1

Query: 7   GLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 66
           G  +F++PLKPCC GVS E+ CGSVDE+G KK+
Sbjct: 287 GSTRFESPLKPCCVGVSREYNCGSVDEKGVKKY 319

Query: 67  106
           
Sbjct: 347 319


HSP 2 Score: 42.0 bits (97), Expect = 3.5e-03
Identity = 13/21 (61.90%), Postives = 17/21 (80.95%), Query Frame = 3

Query: 111 LCNDPKSAFFWDSVHPTQTGW 170
           +C++PK+AFFWD +HPT+ GW
Sbjct: 321 VCDNPKTAFFWDGLHPTEEGW 341

Query: 171 174
           
Sbjct: 381 341

BLAST of CU160975 vs. TrEMBL
Match: A0A0A0KEW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452020 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-12
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1

Query: 1   RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 60
           RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF
Sbjct: 123 RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 157

Query: 61  106
           
Sbjct: 183 157

BLAST of CU160975 vs. TrEMBL
Match: A0A0A0KEW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452020 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-06
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3

Query: 111 LCNDPKSAFFWDSVHPTQTGWAHA 170
           LCNDPKSAFFWDSVHPTQTGWAHA
Sbjct: 159 LCNDPKSAFFWDSVHPTQTGWAHA 182

Query: 171 183
           
Sbjct: 219 182


HSP 2 Score: 57.4 bits (137), Expect = 9.1e-06
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 1

Query: 19  FKTPLKPCCFGVSSEFECGSVDEQGNKKFS 78
           F+TPLKPCCFGVSS F CGSVDE GNK ++
Sbjct: 287 FQTPLKPCCFGVSSNFSCGSVDEHGNKMYT 316

Query: 79  109
           
Sbjct: 347 316

BLAST of CU160975 vs. TrEMBL
Match: A0A0A0KIM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452040 PE=4 SV=1)

HSP 1 Score: 38.5 bits (88), Expect = 4.3e+00
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 3

Query: 111 LCNDPKSAFFWDSVHPTQTGW 170
           LC  P  A FWD+VHPTQ GW
Sbjct: 317 LCKRPDLALFWDTVHPTQKGW 337

Query: 171 174
           
Sbjct: 377 337

BLAST of CU160975 vs. NCBI nr
Match: gi|700193046|gb|KGN48250.1| (hypothetical protein Csa_6G452020 [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1

Query: 1   RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 60
           RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF
Sbjct: 123 RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 157

Query: 61  106
           
Sbjct: 183 157

BLAST of CU160975 vs. NCBI nr
Match: gi|449451259|ref|XP_004143379.1| (PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1

Query: 1   RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 60
           RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF
Sbjct: 288 RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 322

Query: 61  106
           
Sbjct: 348 322

BLAST of CU160975 vs. NCBI nr
Match: gi|659125402|ref|XP_008462669.1| (PREDICTED: GDSL esterase/lipase At5g03610-like, partial [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 7.9e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1

Query: 1   RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKF 60
           RVGLLKFKTPLKPCCFGVSS F CGSVDE+GNKKF
Sbjct: 285 RVGLLKFKTPLKPCCFGVSSGFNCGSVDEKGNKKF 319

Query: 61  106
           
Sbjct: 345 319

BLAST of CU160975 vs. NCBI nr
Match: gi|659125187|ref|XP_008462555.1| (PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 6.9e-07
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 1

Query: 1   RVGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKFS 60
           R G   FKTPLKPCCFGV+S F CGSVDE+GNK ++
Sbjct: 276 RKGGATFKTPLKPCCFGVNSNFSCGSVDERGNKMYT 311

Query: 61  109
           
Sbjct: 336 311

BLAST of CU160975 vs. NCBI nr
Match: gi|694381095|ref|XP_009366645.1| (PREDICTED: GDSL esterase/lipase At5g03610-like [Pyrus x bretschneideri])

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-06
Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 1

Query: 4   VGLLKFKTPLKPCCFGVSSEFECGSVDEQGNKKFS 63
           +G +KF+ PL+PCC G+SSE+ CGSVDE G+KK++
Sbjct: 287 LGSIKFENPLRPCCIGISSEYSCGSVDESGSKKYT 321

Query: 64  109
           
Sbjct: 347 321

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GDL71_ARATH2.0e-0663.64GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KEW4_CUCSA3.8e-12100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452020 PE=4 SV=1[more]
A0A0A0KEW4_CUCSA1.1e-06100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452020 PE=4 SV=1[more]
A0A0A0KIM6_CUCSA4.3e+0066.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G452040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700193046|gb|KGN48250.1|1.1e-12100.00hypothetical protein Csa_6G452020 [Cucumis sativus][more]
gi|449451259|ref|XP_004143379.1|1.1e-12100.00PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis sativus][more]
gi|659125402|ref|XP_008462669.1|7.9e-1191.43PREDICTED: GDSL esterase/lipase At5g03610-like, partial [Cucumis melo][more]
gi|659125187|ref|XP_008462555.1|6.9e-0769.44PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis melo][more]
gi|694381095|ref|XP_009366645.1|3.4e-0660.00PREDICTED: GDSL esterase/lipase At5g03610-like [Pyrus x bretschneideri][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G452020Csa6G452020gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0045606H0045606EST