CU160736 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU160736
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 4779488 .. 4779696 (+)
Sequence length215
The following sequences are available for this feature:

transcribed_cluster sequence

GTTCTTCTTTTCTTGGATTTTCTTCCCATATCTCTGCATTTTAGCTCCATCAACGGGAATGTCAGAGATTGCAATAGAGTCACTTGACATCAAAGCAGAGCCGGAGCATGAACTTGTACAAGGGAACTTGCCAGAGGATTGTTTTGGTGACTTAATTGCTTTACTATCCAGTTAACTTTTTATGGACTCCAGCAGGCTTCTACATCTGAGTGAAT
BLAST of CU160736 vs. TrEMBL
Match: A0A0A0LT77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043170 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.4e-26
Identity = 64/70 (91.43%), Postives = 64/70 (91.43%), Query Frame = -3

Query: 4   SLRCRSLLESIKS*LDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ 63
           SLRCRSLLES K  LDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ
Sbjct: 112 SLRCRSLLESNKKLLDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ 171

Query: 64  RYGKKIQEKK 123
           RYGKK   KK
Sbjct: 172 RYGKKNPRKK 181

Query: 124 183
           
Sbjct: 232 181

Query: 184 214
           
Sbjct: 292 181

BLAST of CU160736 vs. NCBI nr
Match: gi|778657520|ref|XP_004137638.2| (PREDICTED: uncharacterized protein LOC101212209 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 5.7e-24
Identity = 64/70 (91.43%), Postives = 64/70 (91.43%), Query Frame = -3

Query: 4   SLRCRSLLESIKS*LDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ 63
           SLRCRSLLES K  LDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ
Sbjct: 112 SLRCRSLLESNKKLLDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ 171

Query: 64  RYGKKIQEKK 123
           RYGKK   KK
Sbjct: 172 RYGKKNPRKK 181

Query: 124 183
           
Sbjct: 232 181

Query: 184 214
           
Sbjct: 292 181

BLAST of CU160736 vs. NCBI nr
Match: gi|659066971|ref|XP_008436999.1| (PREDICTED: uncharacterized protein LOC103482558 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-19
Identity = 57/70 (81.43%), Postives = 59/70 (84.29%), Query Frame = -3

Query: 4   SLRCRSLLESIKS*LDSKAIKSPKQSSGKFPCTSSCSGSALMSSDSIAISDIPVDGAKMQ 63
           SLRCRSLLES K  LDSKAIKSP +SSGK  CTSSCS SALMSSDSIA SDIP+DGAKMQ
Sbjct: 113 SLRCRSLLESNKKLLDSKAIKSPNKSSGKLLCTSSCSASALMSSDSIATSDIPIDGAKMQ 172

Query: 64  RYGKKIQEKK 123
           RYGKK   KK
Sbjct: 173 RYGKKNPRKK 182

Query: 124 183
           
Sbjct: 233 182

Query: 184 214
           
Sbjct: 293 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LT77_CUCSA9.4e-2691.43Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043170 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778657520|ref|XP_004137638.2|5.7e-2491.43PREDICTED: uncharacterized protein LOC101212209 [Cucumis sativus][more]
gi|659066971|ref|XP_008436999.1|1.1e-1981.43PREDICTED: uncharacterized protein LOC103482558 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G043170Csa1G043170gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0042690H0042690EST