CU160184 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU160184
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionHistone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1
LocationChr4 : 19176620 .. 19176834 (-)
Sequence length214
The following sequences are available for this feature:

transcribed_cluster sequence

GGGACAATGAAGATGGTTATATCTTTGATGCCACACGTTCTTATCCAAACCTTGAAGTTATTTCTGGTGATTCTGACGGGCCTCCAAAACTCCAATTTCCCCTAGTTATTAGTGCAAAAAATGCTGGCAATGTGCTCGTTTTATGAACCATAGTTGCTATCCAAATGTATACTGGAAACCAATTATACGTGAAAAATAAAGGCGAGCATGATGT
BLAST of CU160184 vs. TrEMBL
Match: A0A0A0L455_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G595990 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.2e-18
Identity = 50/70 (71.43%), Postives = 52/70 (74.29%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNVLVL*TIVAIQMYTGNQ 62
           DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV                
Sbjct: 596 DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNVARFMNHSCYPNVYWKP 655

Query: 63  LYVKNKGEHD 122
           +  +NKGEHD
Sbjct: 656 IIRENKGEHD 665

Query: 123 182
           
Sbjct: 716 665

Query: 183 213
           
Sbjct: 776 665

BLAST of CU160184 vs. TrEMBL
Match: B9IHH8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s02600g PE=4 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-06
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV 62
           +NED +IFD TR Y  +EV+ GD +  P LQFPL+I+A+NAGNV
Sbjct: 509 ENEDDHIFDGTRIYQPVEVLPGDLNNAPNLQFPLIINARNAGNV 552

Query: 63  122
           
Sbjct: 569 552

Query: 123 135
           
Sbjct: 629 552

BLAST of CU160184 vs. TrEMBL
Match: B9IHH8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s02600g PE=4 SV=2)

HSP 1 Score: 38.1 bits (87), Expect = 5.2e+00
Identity = 12/19 (63.16%), Postives = 18/19 (94.74%), Query Frame = 2

Query: 134 ARFMNHSCYPNVYWKPIIR 191
           ARF+NHSC PN++W+P++R
Sbjct: 553 ARFINHSCSPNLFWQPVLR 571


HSP 2 Score: 58.9 bits (141), Expect = 2.8e-06
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV 62
           +NED +IFD +R+Y  +E++ GDS+  P L FPLVI+A+NAGNV
Sbjct: 553 ENEDDHIFDGSRTYQPVEILPGDSNNAPNLPFPLVINARNAGNV 596

Query: 63  122
           
Sbjct: 613 596

Query: 123 135
           
Sbjct: 673 596

BLAST of CU160184 vs. TrEMBL
Match: U5G915_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02840g PE=4 SV=1)

HSP 1 Score: 38.1 bits (87), Expect = 5.2e+00
Identity = 12/19 (63.16%), Postives = 18/19 (94.74%), Query Frame = 2

Query: 134 ARFMNHSCYPNVYWKPIIR 191
           ARF+NHSC PN++W+P++R
Sbjct: 597 ARFINHSCSPNLFWQPVLR 615

BLAST of CU160184 vs. NCBI nr
Match: gi|449453802|ref|XP_004144645.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-18
Identity = 50/70 (71.43%), Postives = 52/70 (74.29%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNVLVL*TIVAIQMYTGNQ 62
           DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV                
Sbjct: 596 DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNVARFMNHSCYPNVYWKP 655

Query: 63  LYVKNKGEHD 122
           +  +NKGEHD
Sbjct: 656 IIRENKGEHD 665

Query: 123 182
           
Sbjct: 716 665

Query: 183 213
           
Sbjct: 776 665

BLAST of CU160184 vs. NCBI nr
Match: gi|659130573|ref|XP_008465238.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-17
Identity = 47/70 (67.14%), Postives = 51/70 (72.86%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNVLVL*TIVAIQMYTGNQ 62
           DNEDGYIFDATRSYPNLEV+SGDSDGPP+L FPLVISAKNAGNV                
Sbjct: 597 DNEDGYIFDATRSYPNLEVMSGDSDGPPRLPFPLVISAKNAGNVARFMNHSCCPNVYWKP 656

Query: 63  LYVKNKGEHD 122
           +  +NKGEHD
Sbjct: 657 IIRENKGEHD 666

Query: 123 182
           
Sbjct: 717 666

Query: 183 213
           
Sbjct: 777 666

BLAST of CU160184 vs. NCBI nr
Match: gi|566208318|ref|XP_006373665.1| (hypothetical protein POPTR_0016s02600g [Populus trichocarpa])

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-06
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV 62
           +NED +IFD TR Y  +EV+ GD +  P LQFPL+I+A+NAGNV
Sbjct: 509 ENEDDHIFDGTRIYQPVEVLPGDLNNAPNLQFPLIINARNAGNV 552

Query: 63  122
           
Sbjct: 569 552

Query: 123 135
           
Sbjct: 629 552

BLAST of CU160184 vs. NCBI nr
Match: gi|566174163|ref|XP_006380952.1| (hypothetical protein POPTR_0006s02840g [Populus trichocarpa])

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-06
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV 62
           +NED +IFD +R+Y  +E++ GDS+  P L FPLVI+A+NAGNV
Sbjct: 553 ENEDDHIFDGSRTYQPVEILPGDSNNAPNLPFPLVINARNAGNV 596

Query: 63  122
           
Sbjct: 613 596

Query: 123 135
           
Sbjct: 673 596

BLAST of CU160184 vs. NCBI nr
Match: gi|743894868|ref|XP_011040692.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Populus euphratica])

HSP 1 Score: 57.8 bits (138), Expect = 9.0e-06
Identity = 23/44 (52.27%), Postives = 35/44 (79.55%), Query Frame = 3

Query: 3   DNEDGYIFDATRSYPNLEVISGDSDGPPKLQFPLVISAKNAGNV 62
           +N+D +IFD +R+Y  +E++ GDS+  P L FPL+I+A+NAGNV
Sbjct: 552 ENKDDHIFDGSRTYQPVEILPGDSNNAPNLPFPLIINARNAGNV 595

Query: 63  122
           
Sbjct: 612 595

Query: 123 135
           
Sbjct: 672 595

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L455_CUCSA4.2e-1871.43Uncharacterized protein OS=Cucumis sativus GN=Csa_4G595990 PE=4 SV=1[more]
B9IHH8_POPTR2.2e-0659.09Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s02600g PE=4 SV=2[more]
B9IHH8_POPTR5.2e+0063.16Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s02600g PE=4 SV=2[more]
U5G915_POPTR5.2e+0063.16Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02840g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449453802|ref|XP_004144645.1|2.1e-1871.43PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Cucum... [more]
gi|659130573|ref|XP_008465238.1|5.1e-1767.14PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [... [more]
gi|566208318|ref|XP_006373665.1|1.8e-0659.09hypothetical protein POPTR_0016s02600g [Populus trichocarpa][more]
gi|566174163|ref|XP_006380952.1|2.4e-0656.82hypothetical protein POPTR_0006s02840g [Populus trichocarpa][more]
gi|743894868|ref|XP_011040692.1|9.0e-0652.27PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G595990Csa4G595990gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0036146H0036146EST