CU159949 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU159949
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 3225679 .. 3225897 (+)
Sequence length218
The following sequences are available for this feature:

transcribed_cluster sequence

CTCGTCTACACCATTTCCAAACTTTGAGCGTTCACCACTATGTAATTCCAGCTGAACTCTAGGAACTGACGACGATCTCTGACTCTTCACTGGACTACGGGGGACCGCTCCATTGCTTAACCGATTGAACCTGGAAACCCTGGGAGCAATAGGATAAACAATCGGAATAGAAGAGACGTCGGAGATCGGAACAACGGAAGGAGAGAGAATAGAAAGTG
BLAST of CU159949 vs. TrEMBL
Match: A0A0A0LT43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G030680 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -3

Query: 1   APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 60
           APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE
Sbjct: 82  APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 130

Query: 61  120
           
Sbjct: 142 130

Query: 121 148
           
Sbjct: 202 130

BLAST of CU159949 vs. NCBI nr
Match: gi|778656685|ref|XP_011649510.1| (PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X1 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 8.1e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -3

Query: 1   APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 60
           APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE
Sbjct: 82  APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 130

Query: 61  120
           
Sbjct: 142 130

Query: 121 148
           
Sbjct: 202 130

BLAST of CU159949 vs. NCBI nr
Match: gi|700208846|gb|KGN63942.1| (hypothetical protein Csa_1G030680 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 8.1e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -3

Query: 1   APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 60
           APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE
Sbjct: 82  APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 130

Query: 61  120
           
Sbjct: 142 130

Query: 121 148
           
Sbjct: 202 130

BLAST of CU159949 vs. NCBI nr
Match: gi|778656688|ref|XP_011649515.1| (PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X2 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 8.1e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = -3

Query: 1   APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 60
           APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE
Sbjct: 82  APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 130

Query: 61  120
           
Sbjct: 142 130

Query: 121 148
           
Sbjct: 202 130

BLAST of CU159949 vs. NCBI nr
Match: gi|659066231|ref|XP_008444133.1| (PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-17
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3

Query: 1   APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 60
           APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLE H+GERSKFGNGVDE
Sbjct: 82  APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLESHNGERSKFGNGVDE 130

Query: 61  120
           
Sbjct: 142 130

Query: 121 148
           
Sbjct: 202 130

BLAST of CU159949 vs. NCBI nr
Match: gi|659066233|ref|XP_008444885.1| (PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-17
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = -3

Query: 1   APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLELHSGERSKFGNGVDE 60
           APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLE H+GERSKFGNGVDE
Sbjct: 82  APRVSRFNRLSNGAVPRSPVKSQRSSSVPRVQLESHNGERSKFGNGVDE 130

Query: 61  120
           
Sbjct: 142 130

Query: 121 148
           
Sbjct: 202 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LT43_CUCSA1.9e-18100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G030680 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778656685|ref|XP_011649510.1|8.1e-18100.00PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X1 [Cuc... [more]
gi|700208846|gb|KGN63942.1|8.1e-18100.00hypothetical protein Csa_1G030680 [Cucumis sativus][more]
gi|778656688|ref|XP_011649515.1|8.1e-18100.00PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X2 [Cuc... [more]
gi|659066231|ref|XP_008444133.1|8.9e-1795.92PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X1 [Cuc... [more]
gi|659066233|ref|XP_008444885.1|8.9e-1795.92PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X2 [Cuc... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G030680Csa1G030680gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0033545H0033545EST