CU158833 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU158833
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 4548479 .. 4548838 (+)
Sequence length246
The following sequences are available for this feature:

transcribed_cluster sequence

ATAGTCAAACTTGCCCACATTTTGGCAATTGAATAATGAATCCTTCTGCGGTATCTATCCATCAATAACACAAACGGATGCGCCACCAGCATAAGCATAAAGAGAAAAATAGCAGTGATTGCAGTAGTAGCATAAAAGAACGTTCCTCTGACTTTGGAGCTCAATGGTACTTCTGATAATGGATAACCAGCTTCATGAGTCCCCATTTTCCAAGTTCAGACCTAACAATAATGTACCGACTGTTTC
BLAST of CU158833 vs. Swiss-Prot
Match: LPAT1_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Brassica napus GN=LPAT1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-10
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = -2

Query: 3   THEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSIAK 62
           T E+ YP  E+ LSS++RG               +LM++ HPFVLL DRYRR+ H+ IAK
Sbjct: 95  TPESTYPEPEIKLSSRLRGICFCLVAGISAIVLIVLMIIGHPFVLLFDRYRRKFHHFIAK 154

Query: 63  MWASLT 122
           +WAS++
Sbjct: 155 LWASIS 160

Query: 123 182
           
Sbjct: 215 160

Query: 183 201
           
Sbjct: 275 160

BLAST of CU158833 vs. Swiss-Prot
Match: LPAT1_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=LPAT1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.7e-09
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = -2

Query: 3   THEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSIAK 62
           T ++ +P  E+ LSS++RG               +LM++ HPFVLL D YRR+ H+ IAK
Sbjct: 109 TPDSSFPEPEIKLSSRLRGIFFCVVAGISATFLIVLMIIGHPFVLLFDPYRRKFHHFIAK 168

Query: 63  MWASLT 122
           +WAS++
Sbjct: 169 LWASIS 174

Query: 123 182
           
Sbjct: 229 174

Query: 183 201
           
Sbjct: 289 174

BLAST of CU158833 vs. TrEMBL
Match: A0A0A0LHA4_CUCSA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_2G059790 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20
Identity = 54/69 (78.26%), Postives = 54/69 (78.26%), Query Frame = -2

Query: 3   KMGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYS 62
           KMGTHEAGYPLSEVPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYS
Sbjct: 74  KMGTHEAGYPLSEVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYS 133

Query: 63  IAKMWASLT 122
           IAKMWASLT
Sbjct: 134 IAKMWASLT 142

Query: 123 182
           
Sbjct: 194 142

Query: 183 210
           
Sbjct: 254 142

BLAST of CU158833 vs. TrEMBL
Match: A0A0A0L137_CUCSA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_4G476190 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.4e-19
Identity = 52/68 (76.47%), Postives = 52/68 (76.47%), Query Frame = -2

Query: 3   MGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSI 62
           MGTHEAGYPLS VPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYSI
Sbjct: 1   MGTHEAGYPLSVVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYSI 60

Query: 63  AKMWASLT 122
           AKMWASLT
Sbjct: 61  AKMWASLT 68

Query: 123 182
           
Sbjct: 121 68

Query: 183 207
           
Sbjct: 181 68

BLAST of CU158833 vs. TrEMBL
Match: A0A067F7J9_CITSI (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Citrus sinensis GN=CISIN_1g018977mg PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-11
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = -2

Query: 3   GTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSIA 62
           GT +A YPLSE+ L SKVRG               +LMLV HPFVLL+DRYRR+ H+ IA
Sbjct: 98  GTPDAAYPLSELKLGSKVRGICFYAVTAVVAIFLIVLMLVGHPFVLLLDRYRRKFHHFIA 157

Query: 63  KMWASLT 122
           K+WA+LT
Sbjct: 158 KLWATLT 164

Query: 123 182
           
Sbjct: 218 164

Query: 183 204
           
Sbjct: 278 164

BLAST of CU158833 vs. TrEMBL
Match: A0A067F8E6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018977mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-11
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = -2

Query: 3   GTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSIA 62
           GT +A YPLSE+ L SKVRG               +LMLV HPFVLL+DRYRR+ H+ IA
Sbjct: 98  GTPDAAYPLSELKLGSKVRGICFYAVTAVVAIFLIVLMLVGHPFVLLLDRYRRKFHHFIA 157

Query: 63  KMWASLT 122
           K+WA+LT
Sbjct: 158 KLWATLT 164

Query: 123 182
           
Sbjct: 218 164

Query: 183 204
           
Sbjct: 278 164

BLAST of CU158833 vs. TrEMBL
Match: V4UL01_9ROSI (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Citrus clementina GN=CICLE_v10008803mg PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.0e-11
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = -2

Query: 3   GTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSIA 62
           GT +A YPLSE+ L SKVRG               +LMLV HPFVLL+DRYRR+ H+ IA
Sbjct: 98  GTPDAAYPLSELKLGSKVRGICFYAVTAVVAIFLIVLMLVGHPFVLLLDRYRRKFHHFIA 157

Query: 63  KMWASLT 122
           K+WA+LT
Sbjct: 158 KLWATLT 164

Query: 123 182
           
Sbjct: 218 164

Query: 183 204
           
Sbjct: 278 164

BLAST of CU158833 vs. NCBI nr
Match: gi|778667480|ref|XP_011648932.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-20
Identity = 54/69 (78.26%), Postives = 54/69 (78.26%), Query Frame = -2

Query: 3   KMGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYS 62
           KMGTHEAGYPLSEVPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYS
Sbjct: 74  KMGTHEAGYPLSEVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYS 133

Query: 63  IAKMWASLT 122
           IAKMWASLT
Sbjct: 134 IAKMWASLT 142

Query: 123 182
           
Sbjct: 194 142

Query: 183 210
           
Sbjct: 254 142

BLAST of CU158833 vs. NCBI nr
Match: gi|778694861|ref|XP_011653882.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 7.4e-20
Identity = 53/69 (76.81%), Postives = 53/69 (76.81%), Query Frame = -2

Query: 3   KMGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYS 62
           KMGTHEAGYPLS VPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYS
Sbjct: 108 KMGTHEAGYPLSVVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYS 167

Query: 63  IAKMWASLT 122
           IAKMWASLT
Sbjct: 168 IAKMWASLT 176

Query: 123 182
           
Sbjct: 228 176

Query: 183 210
           
Sbjct: 288 176

BLAST of CU158833 vs. NCBI nr
Match: gi|659083074|ref|XP_008442171.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 7.4e-20
Identity = 53/69 (76.81%), Postives = 53/69 (76.81%), Query Frame = -2

Query: 3   KMGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYS 62
           KMGTHEAGYPLS VPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYS
Sbjct: 108 KMGTHEAGYPLSVVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYS 167

Query: 63  IAKMWASLT 122
           IAKMWASLT
Sbjct: 168 IAKMWASLT 176

Query: 123 182
           
Sbjct: 228 176

Query: 183 210
           
Sbjct: 288 176

BLAST of CU158833 vs. NCBI nr
Match: gi|659083076|ref|XP_008442172.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 7.4e-20
Identity = 53/69 (76.81%), Postives = 53/69 (76.81%), Query Frame = -2

Query: 3   KMGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYS 62
           KMGTHEAGYPLS VPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYS
Sbjct: 56  KMGTHEAGYPLSVVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYS 115

Query: 63  IAKMWASLT 122
           IAKMWASLT
Sbjct: 116 IAKMWASLT 124

Query: 123 182
           
Sbjct: 176 124

Query: 183 210
           
Sbjct: 236 124

BLAST of CU158833 vs. NCBI nr
Match: gi|700199611|gb|KGN54769.1| (hypothetical protein Csa_4G476190 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-19
Identity = 52/68 (76.47%), Postives = 52/68 (76.47%), Query Frame = -2

Query: 3   MGTHEAGYPLSEVPLSSKVRGXXXXXXXXXXXXXXXMLMLVAHPFVLLMDRYRRRIHYSI 62
           MGTHEAGYPLS VPLSSKVRG               MLMLVAHPFVLLMDRYRRRIHYSI
Sbjct: 1   MGTHEAGYPLSVVPLSSKVRGTFFYATTAITAIFLFMLMLVAHPFVLLMDRYRRRIHYSI 60

Query: 63  AKMWASLT 122
           AKMWASLT
Sbjct: 61  AKMWASLT 68

Query: 123 182
           
Sbjct: 121 68

Query: 183 207
           
Sbjct: 181 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LPAT1_BRANA3.1e-1045.451-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Brassica napu... [more]
LPAT1_ARATH7.7e-0940.911-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A0A0LHA4_CUCSA1.4e-2078.261-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_2G05979... [more]
A0A0A0L137_CUCSA3.4e-1976.471-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_4G47619... [more]
A0A067F7J9_CITSI2.0e-1155.221-acyl-sn-glycerol-3-phosphate acyltransferase OS=Citrus sinensis GN=CISIN_1g018... [more]
A0A067F8E6_CITSI2.0e-1155.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018977mg PE=4 SV=1[more]
V4UL01_9ROSI2.0e-1155.221-acyl-sn-glycerol-3-phosphate acyltransferase OS=Citrus clementina GN=CICLE_v10... [more]
Match NameE-valueIdentityDescription
gi|778667480|ref|XP_011648932.1|1.1e-2078.26PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like ... [more]
gi|778694861|ref|XP_011653882.1|7.4e-2076.81PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like ... [more]
gi|659083074|ref|XP_008442171.1|7.4e-2076.81PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isofo... [more]
gi|659083076|ref|XP_008442172.1|7.4e-2076.81PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isofo... [more]
gi|700199611|gb|KGN54769.1|2.8e-1976.47hypothetical protein Csa_4G476190 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G059790Csa2G059790gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0020633H0020633EST