CU157296 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU157296
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr6 : 9120275 .. 9120497 (+)
Sequence length	222

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GTGGGTCGACAATAAACGGAAAATTCTTACCTGAAACCATTGACGGTGGAATTGCTTGTGAAGATTTGGATTGCAGAGAGATAAGGAACATAATATTGAACAAGGGTCTCGCCGTTGTTGACGGCGATTGGAACACCGGCACCGTAAGCGCTCCATTCGTCGTAACAATTCCAGAGATCGCCGAGGGTGAAATATTCAACCTTCTCTCTCTCCCATGGATGC

Library


Library category	ESTs
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU157296 vs. TrEMBL
Match: A0A0A0KG73_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128660 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.0e-31
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV
Sbjct: 41  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 100

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 101 NGFRDE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. TrEMBL
Match: A0A067JJL9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25823 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.2e-29
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWER+ VEYFTLGDLWNCYDEWSAYGAGVPI +NNGETLVQYYVPYLSAIQIFTSNS+V
Sbjct: 41  HPWERDTVEYFTLGDLWNCYDEWSAYGAGVPIVLNNGETLVQYYVPYLSAIQIFTSNSSV 100

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 101 NGFREE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. TrEMBL
Match: B9RW40_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1175860 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.4e-29
Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWER+ VEYFTLGDLWNC+DEWSAYGAGVPIA+NNGETLVQYYVPYLSAIQIFTSNS++
Sbjct: 41  HPWERDTVEYFTLGDLWNCFDEWSAYGAGVPIALNNGETLVQYYVPYLSAIQIFTSNSSL 100

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 101 NGFRDE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. TrEMBL
Match: A0A0D2NG02_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204000 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-28
Identity = 60/66 (90.91%), Postives = 62/66 (93.94%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPI +NN ETLVQYYVPYLSAIQIFTSNS+V
Sbjct: 41  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIVLNNAETLVQYYVPYLSAIQIFTSNSSV 100

Query: 84  NGFR*E 143
           N FR E
Sbjct: 101 NTFREE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. TrEMBL
Match: M5XGX1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa008669m2g PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-28
Identity = 59/66 (89.39%), Postives = 63/66 (95.45%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWEREKVEYFTL DLWNCYDEWSAYGAGVPIA+++GETLVQYYVPYLSAIQIFTSNS+V
Sbjct: 41  HPWEREKVEYFTLSDLWNCYDEWSAYGAGVPIALDSGETLVQYYVPYLSAIQIFTSNSSV 100

Query: 84  NGFR*E 143
           N FR E
Sbjct: 101 NSFREE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. NCBI nr
Match: gi|449444342|ref|XP_004139934.1| (PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 4.5e-32
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV
Sbjct: 41  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 100

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 101 NGFRDE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. NCBI nr
Match: gi|659094859|ref|XP_008448279.1| (PREDICTED: uncharacterized protein LOC103490514 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-31
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV
Sbjct: 41  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 100

Query: 84  NGFR*E 143
           +GFR E
Sbjct: 101 SGFRDE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. NCBI nr
Match: gi|802752733|ref|XP_012088328.1| (PREDICTED: uncharacterized protein LOC105646971 [Jatropha curcas])

HSP 1 Score: 137.5 bits (345), Expect = 9.3e-30
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWER+ VEYFTLGDLWNCYDEWSAYGAGVPI +NNGETLVQYYVPYLSAIQIFTSNS+V
Sbjct: 41  HPWERDTVEYFTLGDLWNCYDEWSAYGAGVPIVLNNGETLVQYYVPYLSAIQIFTSNSSV 100

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 101 NGFREE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. NCBI nr
Match: gi|223542941|gb|EEF44477.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-29
Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWER+ VEYFTLGDLWNC+DEWSAYGAGVPIA+NNGETLVQYYVPYLSAIQIFTSNS++
Sbjct: 41  HPWERDTVEYFTLGDLWNCFDEWSAYGAGVPIALNNGETLVQYYVPYLSAIQIFTSNSSL 100

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 101 NGFRDE 106

Query: 144  203
           
Sbjct: 161  106

Query: 204  222
           
Sbjct: 221  106

[Close]

BLAST of CU157296 vs. NCBI nr
Match: gi|1000968399|ref|XP_002517959.2| (PREDICTED: uncharacterized protein LOC8262107 [Ricinus communis])

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-29
Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = -2


Query: 24  HPWEREKVEYFTLGDLWNCYDEWSAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTV 83
           HPWER+ VEYFTLGDLWNC+DEWSAYGAGVPIA+NNGETLVQYYVPYLSAIQIFTSNS++
Sbjct: 45  HPWERDTVEYFTLGDLWNCFDEWSAYGAGVPIALNNGETLVQYYVPYLSAIQIFTSNSSL 104

Query: 84  NGFR*E 143
           NGFR E
Sbjct: 105 NGFRDE 110

Query: 144  203
           
Sbjct: 165  110

Query: 204  222
           
Sbjct: 225  110

The following BLAST results are available for this feature:

BLAST of CU157296 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG73_CUCSA	2.0e-31	98.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128660 PE=4 SV=1	[more]
A0A067JJL9_JATCU	4.2e-29	90.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25823 PE=4 SV=1	[more]
B9RW40_RICCO	9.4e-29	89.39	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1175860 PE=4 SV=1	[more]
A0A0D2NG02_GOSRA	1.6e-28	90.91	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G204000 PE=4 SV=1	[more]
M5XGX1_PRUPE	4.7e-28	89.39	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa008669m2g PE=4 ...	[more]

BLAST of CU157296 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444342\|ref\|XP_004139934.1\|	4.5e-32	98.48	PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus]	[more]
gi\|659094859\|ref\|XP_008448279.1\|	1.7e-31	96.97	PREDICTED: uncharacterized protein LOC103490514 [Cucumis melo]	[more]
gi\|802752733\|ref\|XP_012088328.1\|	9.3e-30	90.91	PREDICTED: uncharacterized protein LOC105646971 [Jatropha curcas]	[more]
gi\|223542941\|gb\|EEF44477.1\|	2.1e-29	89.39	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000968399\|ref\|XP_002517959.2\|	2.1e-29	89.39	PREDICTED: uncharacterized protein LOC8262107 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008507	DUF789

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G128660	Csa6G128660	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
H0006963	H0006963	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008507	Protein of unknown function DUF789	PFAM	PF05623	DUF789	coord: 7..58 score: 3.0
None	No IPR available	PANTHER	PTHR31343	FAMILY NOT NAMED	coord: 2..65 score: 3.7