CU157041 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU157041
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr7 : 10135263 .. 10135440 (+)
Sequence length	189

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CAGTGTCCACGTACGGTATTGGCCGTAAGGCGAAGTGGTCTGTGGGCAGTTGAAAAGCTCACAGAGGCCTATGATTGGCAAAGCAGAAGAGACCAATGATTTAACCAAGACATCATGTGTGAAGAGTGTGGCCCATGTCTGCCTCAGAATCACCGTCCACGTCACGTTTATTCCACCTATCACAATGCG

Library


Library category	ESTs
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU157041 vs. Swiss-Prot
Match: DTX54_ARATH (Protein DETOXIFICATION 54 OS=Arabidopsis thaliana GN=DTX54 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-11
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           V+G +NV WTVIL++ WA LFT    +K LV+S +PI+GLCEL NCPQTT
Sbjct: 354 VVGALNVAWTVILKERWAGLFTGYEPLKVLVASVMPIVGLCELGNCPQTT 403

Query: 94   153
           
Sbjct: 414  403

Query: 154  184
           
Sbjct: 474  403

[Close]

BLAST of CU157041 vs. Swiss-Prot
Match: DTX50_ARATH (Protein DETOXIFICATION 50 OS=Arabidopsis thaliana GN=DTX50 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-08
Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = -1


Query: 34  IVIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           I +G     +TV +R TWA  FT D  +  L + ALPI+GLCEL NCPQTT
Sbjct: 353 IALGFTAFAFTVSVRNTWAMFFTDDKEIMKLTAMALPIVGLCELGNCPQTT 403

Query: 94   153
           
Sbjct: 413  403

Query: 154  187
           
Sbjct: 473  403

[Close]

BLAST of CU157041 vs. Swiss-Prot
Match: DTX48_ARATH (Protein DETOXIFICATION 48 OS=Arabidopsis thaliana GN=DTX48 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 8.6e-08
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = -1


Query: 34  IVIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           I +G + + + V++R  W  LFT D  +  L S ALPI+GLCEL NCPQTT
Sbjct: 370 IALGLMAMVFAVLVRHHWGRLFTTDAEILQLTSIALPIVGLCELGNCPQTT 420

Query: 94   153
           
Sbjct: 430  420

Query: 154  187
           
Sbjct: 490  420

[Close]

BLAST of CU157041 vs. Swiss-Prot
Match: DTX49_ARATH (Protein DETOXIFICATION 49 OS=Arabidopsis thaliana GN=DTX49 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.6e-06
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = -1


Query: 34  IGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           +G + + + +++R  WA LFT +  +  L S  LPIIGLCEL NCPQTT
Sbjct: 347 LGLLAMFFALMVRNCWARLFTDEEEIVKLTSMVLPIIGLCELGNCPQTT 395

Query: 94   153
           
Sbjct: 407  395

Query: 154  181
           
Sbjct: 467  395

[Close]

BLAST of CU157041 vs. TrEMBL
Match: A0A0A0K9E2_CUCSA (Protein DETOXIFICATION OS=Cucumis sativus GN=Csa_7G290540 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-20
Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = -1


Query: 13  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTTSPYGQYR 72
           VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT+ YG  R
Sbjct: 336 VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTTA-YGILR 391

Query: 73   132
           
Sbjct: 396  391

Query: 133  184
           
Sbjct: 456  391

[Close]

BLAST of CU157041 vs. TrEMBL
Match: B9IQL5_POPTR (Protein DETOXIFICATION OS=Populus trichocarpa GN=POPTR_0019s11600g PE=3 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-13
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG +NVTWTV LR+ WA LFT DVLVK LV++ LPIIGLCEL NCPQTT
Sbjct: 336 VIGVLNVTWTVFLRERWAGLFTKDVLVKGLVAAVLPIIGLCELGNCPQTT 385

Query: 94   153
           
Sbjct: 396  385

Query: 154  184
           
Sbjct: 456  385

[Close]

BLAST of CU157041 vs. TrEMBL
Match: W9QXM8_9ROSA (Protein DETOXIFICATION OS=Morus notabilis GN=L484_016430 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.2e-13
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG INVTWTVILR+ WA LFT D LVK+LV+S +PI+GLCEL NCPQTT
Sbjct: 359 VIGFINVTWTVILRERWAGLFTKDELVKALVASVMPIMGLCELGNCPQTT 408

Query: 94   153
           
Sbjct: 419  408

Query: 154  184
           
Sbjct: 479  408

[Close]

BLAST of CU157041 vs. TrEMBL
Match: A0A067K258_JATCU (Protein DETOXIFICATION OS=Jatropha curcas GN=JCGZ_17156 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-12
Identity = 39/50 (78.00%), Postives = 41/50 (82.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG INVTWTV LR+ WA LFT D LVK LV+S LPIIGLCEL NCPQTT
Sbjct: 336 VIGIINVTWTVFLRERWAGLFTKDRLVKGLVASVLPIIGLCELGNCPQTT 385

Query: 94   153
           
Sbjct: 396  385

Query: 154  184
           
Sbjct: 456  385

[Close]

BLAST of CU157041 vs. TrEMBL
Match: A0A0D2Q981_GOSRA (Protein DETOXIFICATION OS=Gossypium raimondii GN=B456_006G131300 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.0e-12
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG INV WTVILR+ WA LFT D LVK LV++ LPIIGLCEL NCPQTT
Sbjct: 334 VIGIINVAWTVILREKWAGLFTKDDLVKPLVATVLPIIGLCELGNCPQTT 383

Query: 94   153
           
Sbjct: 394  383

Query: 154  184
           
Sbjct: 454  383

[Close]

BLAST of CU157041 vs. NCBI nr
Match: gi|778726413|ref|XP_011659097.1| (PREDICTED: MATE efflux family protein 5 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-20
Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = -1


Query: 13  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTTSPYGQYR 72
           VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT+ YG  R
Sbjct: 336 VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTTA-YGILR 391

Query: 73   132
           
Sbjct: 396  391

Query: 133  184
           
Sbjct: 456  391

[Close]

BLAST of CU157041 vs. NCBI nr
Match: gi|659123040|ref|XP_008461457.1| (PREDICTED: MATE efflux family protein 5 [Cucumis melo])

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-19
Identity = 52/57 (91.23%), Postives = 52/57 (91.23%), Query Frame = -1


Query: 13  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTTSPYGQYR 72
           VIGGINVTWTVILRQTWATLFT DVLVKSLVSSALPIIGLCELFNCPQTT  YG  R
Sbjct: 336 VIGGINVTWTVILRQTWATLFTDDVLVKSLVSSALPIIGLCELFNCPQTTG-YGILR 391

Query: 73   132
           
Sbjct: 396  391

Query: 133  184
           
Sbjct: 456  391

[Close]

BLAST of CU157041 vs. NCBI nr
Match: gi|566240979|ref|XP_002326006.2| (hypothetical protein POPTR_0019s11600g [Populus trichocarpa])

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG +NVTWTV LR+ WA LFT DVLVK LV++ LPIIGLCEL NCPQTT
Sbjct: 336 VIGVLNVTWTVFLRERWAGLFTKDVLVKGLVAAVLPIIGLCELGNCPQTT 385

Query: 94   153
           
Sbjct: 396  385

Query: 154  184
           
Sbjct: 456  385

[Close]

BLAST of CU157041 vs. NCBI nr
Match: gi|703093192|ref|XP_010094848.1| (Multidrug and toxin extrusion protein 1 [Morus notabilis])

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-12
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG INVTWTVILR+ WA LFT D LVK+LV+S +PI+GLCEL NCPQTT
Sbjct: 359 VIGFINVTWTVILRERWAGLFTKDELVKALVASVMPIMGLCELGNCPQTT 408

Query: 94   153
           
Sbjct: 419  408

Query: 154  184
           
Sbjct: 479  408

[Close]

BLAST of CU157041 vs. NCBI nr
Match: gi|743917031|ref|XP_011002496.1| (PREDICTED: MATE efflux family protein 5-like isoform X1 [Populus euphratica])

HSP 1 Score: 79.3 bits (194), Expect = 2.6e-12
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = -1


Query: 34  VIGGINVTWTVILRQTWATLFTHDVLVKSLVSSALPIIGLCELFNCPQTT 93
           VIG +NVTWTV LR+ WA LFT DVLVK LV++ LPIIGLCEL NCPQTT
Sbjct: 336 VIGILNVTWTVFLRERWAGLFTKDVLVKGLVAAVLPIIGLCELGNCPQTT 385

Query: 94   153
           
Sbjct: 396  385

Query: 154  184
           
Sbjct: 456  385

The following BLAST results are available for this feature:

BLAST of CU157041 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DTX54_ARATH	1.3e-11	62.00	Protein DETOXIFICATION 54 OS=Arabidopsis thaliana GN=DTX54 PE=2 SV=1	[more]
DTX50_ARATH	3.9e-08	52.94	Protein DETOXIFICATION 50 OS=Arabidopsis thaliana GN=DTX50 PE=2 SV=1	[more]
DTX48_ARATH	8.6e-08	50.98	Protein DETOXIFICATION 48 OS=Arabidopsis thaliana GN=DTX48 PE=2 SV=1	[more]
DTX49_ARATH	1.6e-06	48.98	Protein DETOXIFICATION 49 OS=Arabidopsis thaliana GN=DTX49 PE=2 SV=1	[more]

BLAST of CU157041 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9E2_CUCSA	1.1e-20	92.98	Protein DETOXIFICATION OS=Cucumis sativus GN=Csa_7G290540 PE=3 SV=1	[more]
B9IQL5_POPTR	4.8e-13	76.00	Protein DETOXIFICATION OS=Populus trichocarpa GN=POPTR_0019s11600g PE=3 SV=2	[more]
W9QXM8_9ROSA	6.2e-13	76.00	Protein DETOXIFICATION OS=Morus notabilis GN=L484_016430 PE=3 SV=1	[more]
A0A067K258_JATCU	1.1e-12	78.00	Protein DETOXIFICATION OS=Jatropha curcas GN=JCGZ_17156 PE=3 SV=1	[more]
A0A0D2Q981_GOSRA	4.0e-12	76.00	Protein DETOXIFICATION OS=Gossypium raimondii GN=B456_006G131300 PE=3 SV=1	[more]

BLAST of CU157041 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778726413\|ref\|XP_011659097.1\|	2.6e-20	92.98	PREDICTED: MATE efflux family protein 5 [Cucumis sativus]	[more]
gi\|659123040\|ref\|XP_008461457.1\|	3.7e-19	91.23	PREDICTED: MATE efflux family protein 5 [Cucumis melo]	[more]
gi\|566240979\|ref\|XP_002326006.2\|	2.0e-12	76.00	hypothetical protein POPTR_0019s11600g [Populus trichocarpa]	[more]
gi\|703093192\|ref\|XP_010094848.1\|	2.6e-12	76.00	Multidrug and toxin extrusion protein 1 [Morus notabilis]	[more]
gi\|743917031\|ref\|XP_011002496.1\|	2.6e-12	76.00	PREDICTED: MATE efflux family protein 5-like isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G290540	Csa7G290540	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
H0005969	H0005969	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11206	MULTIDRUG RESISTANCE PROTEIN	coord: 2..52 score: 7.3
None	No IPR available	PANTHER	PTHR11206:SF75	MATE EFFLUX FAMILY PROTEIN	coord: 2..52 score: 7.3