CU157034 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU157034
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionABC transporter D family member 1
LocationChr4 : 6343033 .. 6343235 (-)
Sequence length201
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GGGACTGAAGTCACTTCATGCACTTGCCGCTATTTTGTTGTCTAAGATGGGCAATAAGGGTGCCAGGGATTTGTTATCTTTACTGGGTATTGTGGTAAGTGCAAGCTATATATATCAAGTGATGTGATGAGTCTGATTGATATATTGTCAATCTGTTTTTTCTTATTCTTCCTTTTCTTTCTCATTGGTAAATTGTCGTAG
Homology
[Close]
BLAST of CU157034 vs. TrEMBL
Match: A0A0A0KXT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097120 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.1e-07
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 

Query: 2   GLKSLHALAAILLSKMGNKGARDLLSLLGIVV 61
           GLKSLHALAAILLSKMGNKGARDLLSLLGIVV
Sbjct: 84  GLKSLHALAAILLSKMGNKGARDLLSLLGIVV 115

Query: 62   98
           
Sbjct: 144  115

[Close]
BLAST of CU157034 vs. NCBI nr
Match: gi|778691817|ref|XP_011653356.1| (PREDICTED: ABC transporter D family member 1 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-06
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 

Query: 2   GLKSLHALAAILLSKMGNKGARDLLSLLGIVV 61
           GLKSLHALAAILLSKMGNKGARDLLSLLGIVV
Sbjct: 84  GLKSLHALAAILLSKMGNKGARDLLSLLGIVV 115

Query: 62   98
           
Sbjct: 144  115

[Close]
BLAST of CU157034 vs. NCBI nr
Match: gi|700198496|gb|KGN53654.1| (hypothetical protein Csa_4G097120 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-06
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2 

Query: 2   GLKSLHALAAILLSKMGNKGARDLLSLLGIVV 61
           GLKSLHALAAILLSKMGNKGARDLLSLLGIVV
Sbjct: 84  GLKSLHALAAILLSKMGNKGARDLLSLLGIVV 115

Query: 62   98
           
Sbjct: 144  115

The following BLAST results are available for this feature:
BLAST of CU157034 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXT1_CUCSA3.1e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097120 PE=4 SV=1[more]
BLAST of CU157034 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778691817|ref|XP_011653356.1|1.7e-06100.00PREDICTED: ABC transporter D family member 1 [Cucumis sativus][more]
gi|700198496|gb|KGN53654.1|1.7e-06100.00hypothetical protein Csa_4G097120 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G097120Csa4G097120gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0005946H0005946EST