CU156650 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU156650
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 2968512 .. 2968669 (-)
Sequence length157
The following sequences are available for this feature:

transcribed_cluster sequence

TGGGTGCTATGGTGGATGAAGGCTGAAAAGACGTCGGCGGGAGCTTTGAGGATTGAGTTTGAAATGAGAAATTAGACGAATATTTGTTTTCTTCCTTAATGTTCTGCTGATTATATCCAAAATTGCTCTTCCAATTCAACGAGTGAGACGGGAAAGT
BLAST of CU156650 vs. TrEMBL
Match: G0Z734_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -1

Query: 2   TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP 61
           TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP
Sbjct: 109 TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP 160

Query: 62  121
           
Sbjct: 169 160

Query: 122 158
           
Sbjct: 229 160

BLAST of CU156650 vs. NCBI nr
Match: gi|525507238|ref|NP_001267657.1| (uncharacterized protein LOC101207158 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 4.8e-20
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -1

Query: 2   TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP 61
           TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP
Sbjct: 109 TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP 160

Query: 62  121
           
Sbjct: 169 160

Query: 122 158
           
Sbjct: 229 160

BLAST of CU156650 vs. NCBI nr
Match: gi|659114935|ref|XP_008457300.1| (PREDICTED: probable WRKY transcription factor 33 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-19
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = -1

Query: 2   TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTIAP 61
           TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSST AP
Sbjct: 109 TFPSHSLNWKSNFGYNQQNIKEENKYSSNFSFQTQSSKLPPTSFQPSSTTAP 160

Query: 62  121
           
Sbjct: 169 160

Query: 122 158
           
Sbjct: 229 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
G0Z734_CUCSA2.1e-22100.00Uncharacterized protein OS=Cucumis sativus GN=WRKY2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
gi|525507238|ref|NP_001267657.1|4.8e-20100.00uncharacterized protein LOC101207158 [Cucumis sativus][more]
gi|659114935|ref|XP_008457300.1|1.8e-1998.08PREDICTED: probable WRKY transcription factor 33 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G025960Csa1G025960gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0004383H0004383EST