CU156347 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU156347
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCellulase (glycosyl hydrolase family 5) protein
LocationChr3 : 13080764 .. 13080980 (-)
Sequence length215
The following sequences are available for this feature:

transcribed_cluster sequence

CGGGAGAAAGTTTCGGAGTGCTCGACTCTAATTGGACTCAAATTAAGAACCCTAACTTTGTACAAAAGTTTCAACTATTGCAGACCATGTTGCACGGTAACTATATAAATGATTATTACAAGTACATGCAATGATCTATAGTTATATAGTATCAAAGTAACACTTTGTATAACATCTTTTTATGATATATATGCAGATCCAAATTCTAATGCATC
BLAST of CU156347 vs. TrEMBL
Match: A0A0A0K853_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028440 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.1e-09
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 3

Query: 6   ESFGVLDSNWTQIKNPNFVQKFQLLQTMLHGNYINDYYKYM 65
           E+FGVLDSNWTQIKNPNFVQKFQLLQTML   Y N  + Y+
Sbjct: 364 ETFGVLDSNWTQIKNPNFVQKFQLLQTMLQDPYSNASFSYV 404

Query: 66  125
           
Sbjct: 424 404

Query: 126 129
           
Sbjct: 484 404

BLAST of CU156347 vs. TrEMBL
Match: A0A0A0L644_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186670 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-08
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 3

Query: 3   GESFGVLDSNWTQIKNPNFVQKFQLLQTMLHGNYINDYYKYM 62
           GESFGVLDSNWTQIKNPNFV+KFQLLQTML     N  + Y+
Sbjct: 174 GESFGVLDSNWTQIKNPNFVRKFQLLQTMLQDPNSNASFSYV 215

Query: 63  122
           
Sbjct: 234 215

Query: 123 129
           
Sbjct: 294 215

BLAST of CU156347 vs. NCBI nr
Match: gi|778721997|ref|XP_011658389.1| (PREDICTED: uncharacterized protein LOC101207450 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 8.8e-09
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 3

Query: 6   ESFGVLDSNWTQIKNPNFVQKFQLLQTMLHGNYINDYYKYM 65
           E+FGVLDSNWTQIKNPNFVQKFQLLQTML   Y N  + Y+
Sbjct: 364 ETFGVLDSNWTQIKNPNFVQKFQLLQTMLQDPYSNASFSYV 404

Query: 66  125
           
Sbjct: 424 404

Query: 126 129
           
Sbjct: 484 404

BLAST of CU156347 vs. NCBI nr
Match: gi|700202307|gb|KGN57440.1| (hypothetical protein Csa_3G186670 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-08
Identity = 31/42 (73.81%), Postives = 34/42 (80.95%), Query Frame = 3

Query: 3   GESFGVLDSNWTQIKNPNFVQKFQLLQTMLHGNYINDYYKYM 62
           GESFGVLDSNWTQIKNPNFV+KFQLLQTML     N  + Y+
Sbjct: 174 GESFGVLDSNWTQIKNPNFVRKFQLLQTMLQDPNSNASFSYV 215

Query: 63  122
           
Sbjct: 234 215

Query: 123 129
           
Sbjct: 294 215

BLAST of CU156347 vs. NCBI nr
Match: gi|659090006|ref|XP_008445780.1| (PREDICTED: uncharacterized protein LOC103488703 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 2.8e-07
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 3

Query: 6   ESFGVLDSNWTQIKNPNFVQKFQLLQTMLHGNYINDYYKYM 65
           E+FGVL+SNWTQIKNPNFVQKFQLLQTML     N  + Y+
Sbjct: 275 ETFGVLESNWTQIKNPNFVQKFQLLQTMLQDPNSNASFSYV 315

Query: 66  125
           
Sbjct: 335 315

Query: 126 129
           
Sbjct: 395 315

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K853_CUCSA6.1e-0975.61Uncharacterized protein OS=Cucumis sativus GN=Csa_6G028440 PE=3 SV=1[more]
A0A0A0L644_CUCSA1.8e-0873.81Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778721997|ref|XP_011658389.1|8.8e-0975.61PREDICTED: uncharacterized protein LOC101207450 [Cucumis sativus][more]
gi|700202307|gb|KGN57440.1|2.6e-0873.81hypothetical protein Csa_3G186670 [Cucumis sativus][more]
gi|659090006|ref|XP_008445780.1|2.8e-0770.73PREDICTED: uncharacterized protein LOC103488703 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G186670Csa3G186670gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0002851H0002851EST