CU156305 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU156305
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 7815620 .. 7815829 (+)
Sequence length209
The following sequences are available for this feature:

transcribed_cluster sequence

GGGAAAATTCCGGTGCCGGCTGGACTCTGGAGTTGAGGATCGAAAATCCGGTGGCCTCTGCCGGATCGTCGCGGCCTTGGGCAGTGATCATGTTGGCTTGGTGAAGAATCGGCTGTCGGACGAAGATTTCGCAGTTCTGGAGGACGGCGGCCGAGTTGCCAAAGATGAAGTCGATGGTGCCATAGATTTTGCAGTCGCGGTAGAATTGG
BLAST of CU156305 vs. Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 8.0e-23
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = -2

Query: 5   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 64
           QFYRDC IYGTIDFIFG++AAV QNC+IFVR+P+ HQ NMITAQGRDDP   +G SI +S
Sbjct: 345 QFYRDCHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHS 404

Query: 65  RVQPAPEF 124
           R++ APEF
Sbjct: 405 RIRAAPEF 412

Query: 125 184
           
Sbjct: 465 412

Query: 185 209
           
Sbjct: 525 412

BLAST of CU156305 vs. Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 8.3e-20
Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = -2

Query: 8   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 67
           QFYR+C IYGT+DFIFGN+AAV QNC I  R+P+  QAN+ITAQGR DP + TG SI NS
Sbjct: 360 QFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNS 419

Query: 68  RVQPAPE 127
           R+ PAP+
Sbjct: 420 RILPAPD 426

Query: 128 187
           
Sbjct: 480 426

Query: 188 209
           
Sbjct: 540 426

BLAST of CU156305 vs. Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-18
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = -2

Query: 2   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 61
           QFYR+C IYGTIDFIFGN+AA+ QNC I+ R+P+ +Q N +TA GR DP + TG SI+N 
Sbjct: 447 QFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINC 506

Query: 62  RVQPAPEFS 121
            +  AP+ +
Sbjct: 507 TIGAAPDLA 515

Query: 122 181
           
Sbjct: 567 515

Query: 182 209
           
Sbjct: 627 515

BLAST of CU156305 vs. Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.5e-18
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = -2

Query: 2   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 61
           QFYR+C IYGT+DFIFGN+AA+ QNC I+ R+P+  Q N ITA GR DP + TG SI+N 
Sbjct: 442 QFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINC 501

Query: 62  RVQPAPEFS 121
            ++ AP+ +
Sbjct: 502 TIKAAPDLA 510

Query: 122 181
           
Sbjct: 562 510

Query: 182 209
           
Sbjct: 622 510

BLAST of CU156305 vs. Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.7e-17
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = -2

Query: 8   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 67
           QFY +C +YGTIDFIFGN+AAVLQ C ++ R+P  +Q N+ TAQGRDDP + TG SILN 
Sbjct: 146 QFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNC 205

Query: 68  RVQPAPE 127
           +V  A +
Sbjct: 206 KVAAAAD 212

Query: 128 187
           
Sbjct: 266 212

Query: 188 209
           
Sbjct: 326 212

BLAST of CU156305 vs. TrEMBL
Match: A0A0A0L3U7_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_3G126790 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.6e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = -2

Query: 2   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 61
           QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS
Sbjct: 313 QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 372

Query: 62  RVQPAPEFS 121
           RVQPAPEFS
Sbjct: 373 RVQPAPEFS 381

Query: 122 181
           
Sbjct: 433 381

Query: 182 209
           
Sbjct: 493 381

BLAST of CU156305 vs. TrEMBL
Match: A0A0J8BJ43_BETVU (Pectinesterase OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018820 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 5.6e-23
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = -2

Query: 5   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 64
           QFYRDC IYGT+DFIFGN+A VLQNC+IFVR+P+ HQANMITAQGR+ P E TG SI  S
Sbjct: 496 QFYRDCHIYGTVDFIFGNAAVVLQNCDIFVRKPMNHQANMITAQGRESPYENTGISIHGS 555

Query: 65  RVQPAPEF 124
           R+QPAPEF
Sbjct: 556 RIQPAPEF 563

Query: 125 184
           
Sbjct: 616 563

Query: 185 209
           
Sbjct: 676 563

BLAST of CU156305 vs. TrEMBL
Match: A0A0K9QXE3_SPIOL (Pectinesterase OS=Spinacia oleracea GN=SOVF_130330 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 9.5e-23
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = -2

Query: 5   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 64
           QFYRDC +YGT+DFIFGN+A VLQNC+IFVR+P+ HQANMITAQGR DP E TG SI  S
Sbjct: 350 QFYRDCHVYGTVDFIFGNAAVVLQNCDIFVRKPMNHQANMITAQGRGDPNENTGISIHGS 409

Query: 65  RVQPAPEF 124
           R++PAPEF
Sbjct: 410 RIRPAPEF 417

Query: 125 184
           
Sbjct: 470 417

Query: 185 209
           
Sbjct: 530 417

BLAST of CU156305 vs. TrEMBL
Match: A0A0D2PSW3_GOSRA (Pectinesterase OS=Gossypium raimondii GN=B456_008G113200 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.0e-22
Identity = 48/68 (70.59%), Postives = 62/68 (91.18%), Query Frame = -2

Query: 5   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 64
           QFYRDC I+GTID+IFG+++AVLQNC+IFV++P+ HQ+NM+TAQGRDDP E TG SI+ S
Sbjct: 325 QFYRDCHIHGTIDYIFGDASAVLQNCDIFVKRPMDHQSNMVTAQGRDDPNENTGISIMES 384

Query: 65  RVQPAPEF 124
           RV+PAP+F
Sbjct: 385 RVRPAPDF 392

Query: 125 184
           
Sbjct: 445 392

Query: 185 209
           
Sbjct: 505 392

BLAST of CU156305 vs. TrEMBL
Match: A0A0D3DUP1_BRAOL (Pectinesterase OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-21
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = -2

Query: 5   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 64
           QFYRDC IYGTIDFIFG++AAV QNC+IFVR+P+ HQ NMITAQGRD+P E TG SI NS
Sbjct: 347 QFYRDCHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDNPHENTGISIQNS 406

Query: 65  RVQPAPEF 124
           RV+ +PEF
Sbjct: 407 RVRASPEF 414

Query: 125 184
           
Sbjct: 467 414

Query: 185 209
           
Sbjct: 527 414

BLAST of CU156305 vs. NCBI nr
Match: gi|700201482|gb|KGN56615.1| (hypothetical protein Csa_3G126790 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 3.2e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = -2

Query: 2   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 61
           QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS
Sbjct: 313 QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 372

Query: 62  RVQPAPEFS 121
           RVQPAPEFS
Sbjct: 373 RVQPAPEFS 381

Query: 122 181
           
Sbjct: 433 381

Query: 182 209
           
Sbjct: 493 381

BLAST of CU156305 vs. NCBI nr
Match: gi|778677487|ref|XP_004134349.2| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 3.2e-32
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = -2

Query: 2   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 61
           QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS
Sbjct: 189 QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 248

Query: 62  RVQPAPEFS 121
           RVQPAPEFS
Sbjct: 249 RVQPAPEFS 257

Query: 122 181
           
Sbjct: 309 257

Query: 182 209
           
Sbjct: 369 257

BLAST of CU156305 vs. NCBI nr
Match: gi|659075523|ref|XP_008438191.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 isoform X1 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 7.5e-29
Identity = 63/69 (91.30%), Postives = 65/69 (94.20%), Query Frame = -2

Query: 2   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 61
           QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQP  HQANMITAQGRDDPAEATG SILNS
Sbjct: 316 QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPRRHQANMITAQGRDDPAEATGISILNS 375

Query: 62  RVQPAPEFS 121
           RVQP P+F+
Sbjct: 376 RVQPTPDFA 384

Query: 122 181
           
Sbjct: 436 384

Query: 182 209
           
Sbjct: 496 384

BLAST of CU156305 vs. NCBI nr
Match: gi|659075525|ref|XP_008438192.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 isoform X2 [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 4.2e-24
Identity = 55/67 (82.09%), Postives = 57/67 (85.07%), Query Frame = -1

Query: 9   PILPRLQNLWHHRLHLWQLGRRPPELRNLRPTADSSPSQHDHCPRPRRSGRGHRIFDPQL 68
           PILPRLQNLWHHR HL QLG RPPELRNLRPTA++ P QHDH PRPRRSGRGH  FDPQL
Sbjct: 322 PILPRLQNLWHHRFHLRQLGCRPPELRNLRPTAETPPGQHDHRPRPRRSGRGHWNFDPQL 381

Query: 69  QSPAGTG 128
           QSPA  G
Sbjct: 382 QSPADAG 388

Query: 129 188
           
Sbjct: 442 388

Query: 189 210
           
Sbjct: 502 388

BLAST of CU156305 vs. NCBI nr
Match: gi|870847706|gb|KMT00054.1| (hypothetical protein BVRB_1g018820 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 115.9 bits (289), Expect = 2.7e-23
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = -2

Query: 5   QFYRDCKIYGTIDFIFGNSAAVLQNCEIFVRQPILHQANMITAQGRDDPAEATGFSILNS 64
           QFYRDC IYGT+DFIFGN+A VLQNC+IFVR+P+ HQANMITAQGR+ P E TG SI  S
Sbjct: 496 QFYRDCHIYGTVDFIFGNAAVVLQNCDIFVRKPMNHQANMITAQGRESPYENTGISIHGS 555

Query: 65  RVQPAPEF 124
           R+QPAPEF
Sbjct: 556 RIQPAPEF 563

Query: 125 184
           
Sbjct: 616 563

Query: 185 209
           
Sbjct: 676 563

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PME36_ARATH8.0e-2372.06Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=P... [more]
PME59_ARATH8.3e-2067.16Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=P... [more]
PME47_ARATH2.0e-1856.52Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=P... [more]
PME25_ARATH4.5e-1856.52Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=P... [more]
PME_ACTDE1.7e-1759.70Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L3U7_CUCSA6.6e-32100.00Pectinesterase OS=Cucumis sativus GN=Csa_3G126790 PE=4 SV=1[more]
A0A0J8BJ43_BETVU5.6e-2376.47Pectinesterase OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018820 PE=4 SV=1[more]
A0A0K9QXE3_SPIOL9.5e-2375.00Pectinesterase OS=Spinacia oleracea GN=SOVF_130330 PE=4 SV=1[more]
A0A0D2PSW3_GOSRA8.0e-2270.59Pectinesterase OS=Gossypium raimondii GN=B456_008G113200 PE=4 SV=1[more]
A0A0D3DUP1_BRAOL1.0e-2175.00Pectinesterase OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201482|gb|KGN56615.1|3.2e-32100.00hypothetical protein Csa_3G126790 [Cucumis sativus][more]
gi|778677487|ref|XP_004134349.2|3.2e-32100.00PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 [Cucumis sativus][more]
gi|659075523|ref|XP_008438191.1|7.5e-2991.30PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 isoform X1 [Cucum... [more]
gi|659075525|ref|XP_008438192.1|4.2e-2482.09PREDICTED: probable pectinesterase/pectinesterase inhibitor 36 isoform X2 [Cucum... [more]
gi|870847706|gb|KMT00054.1|2.7e-2376.47hypothetical protein BVRB_1g018820 [Beta vulgaris subsp. vulgaris][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G126790Csa3G126790gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0002654H0002654EST