CU154156 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU154156
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 598622 .. 599458 (+)
Sequence length178
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TTTTTCTCCTATGACTGAAGCCGAAGAGTTTTTAGGATAAAGTTCTTTACTATTTCAGGCTCCCCATTCATTAGAAAAGCAAAACGCACTTGGGACGAAGTCTCTTACAAAACACTTTGATCATAGTTAAGATTTTCTTCAGTACTGTCCAACGCCGCAATAGTACCAACTGGCTGGC
Library
Library categoryESTs
gynoecious flower library1
Homology
[Close]
BLAST of CU154156 vs. Swiss-Prot
Match: INVB_ARATH (Probable alkaline/neutral invertase B OS=Arabidopsis thaliana GN=INVB PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.2e-13
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAA+D++EE LNYDQ  + +       AFLMNGEP+IVKNF+LKTLRLQS EK
Sbjct: 124 QPVGTIAAVDNSEEKLNYDQVFVRDFVPSA-LAFLMNGEPDIVKNFLLKTLRLQSWEK 180

Query: 63   122
           
Sbjct: 184  180

Query: 123  177
           
Sbjct: 244  180

[Close]
BLAST of CU154156 vs. Swiss-Prot
Match: CINV2_ARATH (Alkaline/neutral invertase CINV2 OS=Arabidopsis thaliana GN=CINV2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.5e-10
Identity = 37/59 (62.71%), Postives = 42/59 (71.19%), Query Frame = -3 

Query: 3   QPVGTIAALD-STEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAA D ++EE LNYDQ  + +       AFLMNGEP+IVKNF+LKTL+LQ  EK
Sbjct: 110 QPVGTIAAYDHASEEVLNYDQVFVRDFVPSA-LAFLMNGEPDIVKNFLLKTLQLQGWEK 167

Query: 63   122
           
Sbjct: 170  167

Query: 123  177
           
Sbjct: 230  167

[Close]
BLAST of CU154156 vs. Swiss-Prot
Match: INVD_ARATH (Probable alkaline/neutral invertase D OS=Arabidopsis thaliana GN=INVD PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.5e-10
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = -3 

Query: 3   QPVGTIAALD-STEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAA D +TEE LNYDQ  + +       AFLMNGEP+IVKNF+LKT+++Q  EK
Sbjct: 87  QPVGTIAAYDHATEEVLNYDQVFVRDFVPSA-LAFLMNGEPDIVKNFLLKTIQIQGREK 144

Query: 63   122
           
Sbjct: 147  144

Query: 123  177
           
Sbjct: 207  144

[Close]
BLAST of CU154156 vs. Swiss-Prot
Match: CINV1_ARATH (Alkaline/neutral invertase CINV1 OS=Arabidopsis thaliana GN=CINV1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.9e-09
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = -3 

Query: 3   QPVGTIAALD-STEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGT+AA+D +T+E LNYDQ V          AFLMNGEP+IVK+F+LKTL+LQ  EK
Sbjct: 102 QPVGTLAAVDNTTDEVLNYDQ-VFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQGWEK 159

Query: 63   122
           
Sbjct: 162  159

Query: 123  177
           
Sbjct: 222  159

[Close]
BLAST of CU154156 vs. Swiss-Prot
Match: INVF_ARATH (Probable alkaline/neutral invertase F OS=Arabidopsis thaliana GN=INVF PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-09
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = -3 

Query: 3   QPVGTIAALD-STEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           +PVGTIAA D ++EE LNYDQ  + +       AFLMNGEPEIVKNF+LKTL +Q  +K
Sbjct: 52  KPVGTIAAYDHASEEVLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFLLKTLHIQGQDK 109

Query: 63   122
           
Sbjct: 112  109

Query: 123  177
           
Sbjct: 172  109

[Close]
BLAST of CU154156 vs. TrEMBL
Match: A0A0A0K5W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009210 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.8e-14
Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALDSTEENLNYDQ  + +      FAFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 125 QPVGTIAALDSTEENLNYDQVFVRDFVPSA-FAFLMNGEPEIVKNFILKTLRLQSWEK 181

Query: 63   122
           
Sbjct: 185  181

Query: 123  177
           
Sbjct: 245  181

[Close]
BLAST of CU154156 vs. TrEMBL
Match: A0A0D2NI51_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G252100 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 7.5e-13
Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALD+TEENLNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 130 QPVGTIAALDNTEENLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 186

Query: 63   122
           
Sbjct: 190  186

Query: 123  177
           
Sbjct: 250  186

[Close]
BLAST of CU154156 vs. TrEMBL
Match: A0A0B0PU09_GOSAR (Protein degV OS=Gossypium arboreum GN=F383_08817 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 7.5e-13
Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALD+TEENLNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 132 QPVGTIAALDNTEENLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 188

Query: 63   122
           
Sbjct: 192  188

Query: 123  177
           
Sbjct: 252  188

[Close]
BLAST of CU154156 vs. TrEMBL
Match: S4SKC1_ACTCH (Neutral invertase OS=Actinidia chinensis GN=NIK PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.7e-12
Identity = 43/57 (75.44%), Postives = 46/57 (80.70%), Query Frame = -3 

Query: 3   PVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           PVGTIAALDS+EENLNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 130 PVGTIAALDSSEENLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 185

Query: 63   122
           
Sbjct: 190  185

Query: 123  174
           
Sbjct: 250  185

[Close]
BLAST of CU154156 vs. TrEMBL
Match: A0A068TLY6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014151001 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.9e-12
Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALDS+EE LNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 123 QPVGTIAALDSSEEKLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 179

Query: 63   122
           
Sbjct: 183  179

Query: 123  177
           
Sbjct: 243  179

[Close]
BLAST of CU154156 vs. NCBI nr
Match: gi|449454175|ref|XP_004144831.1| (PREDICTED: probable alkaline/neutral invertase B [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-14
Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALDSTEENLNYDQ  + +      FAFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 125 QPVGTIAALDSTEENLNYDQVFVRDFVPSA-FAFLMNGEPEIVKNFILKTLRLQSWEK 181

Query: 63   122
           
Sbjct: 185  181

Query: 123  177
           
Sbjct: 245  181

[Close]
BLAST of CU154156 vs. NCBI nr
Match: gi|659094308|ref|XP_008447991.1| (PREDICTED: alkaline/neutral invertase CINV2 [Cucumis melo])

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-14
Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALDSTEENLNYDQ  + +      FAFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 125 QPVGTIAALDSTEENLNYDQVFVRDFVPSA-FAFLMNGEPEIVKNFILKTLRLQSWEK 181

Query: 63   122
           
Sbjct: 185  181

Query: 123  177
           
Sbjct: 245  181

[Close]
BLAST of CU154156 vs. NCBI nr
Match: gi|823161159|ref|XP_012480445.1| (PREDICTED: probable alkaline/neutral invertase B [Gossypium raimondii])

HSP 1 Score: 81.6 bits (200), Expect = 4.8e-13
Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALD+TEENLNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 130 QPVGTIAALDNTEENLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 186

Query: 63   122
           
Sbjct: 190  186

Query: 123  177
           
Sbjct: 250  186

[Close]
BLAST of CU154156 vs. NCBI nr
Match: gi|728850530|gb|KHG29973.1| (Protein degV [Gossypium arboreum])

HSP 1 Score: 81.6 bits (200), Expect = 4.8e-13
Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALD+TEENLNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 132 QPVGTIAALDNTEENLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 188

Query: 63   122
           
Sbjct: 192  188

Query: 123  177
           
Sbjct: 252  188

[Close]
BLAST of CU154156 vs. NCBI nr
Match: gi|747082380|ref|XP_011088508.1| (PREDICTED: alkaline/neutral invertase CINV2-like [Sesamum indicum])

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-12
Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = -3 

Query: 3   QPVGTIAALDSTEENLNYDQSVL*ETSSQVRFAFLMNGEPEIVKNFILKTLRLQS*EK 62
           QPVGTIAALD++EENLNYDQ  + +       AFLMNGEPEIVKNFILKTLRLQS EK
Sbjct: 126 QPVGTIAALDNSEENLNYDQVFVRDFVPSA-LAFLMNGEPEIVKNFILKTLRLQSWEK 182

Query: 63   122
           
Sbjct: 186  182

Query: 123  177
           
Sbjct: 246  182

The following BLAST results are available for this feature:
BLAST of CU154156 vs. Swiss-Prot
Match NameE-valueIdentityDescription
INVB_ARATH8.2e-1367.24Probable alkaline/neutral invertase B OS=Arabidopsis thaliana GN=INVB PE=1 SV=1[more]
CINV2_ARATH6.5e-1062.71Alkaline/neutral invertase CINV2 OS=Arabidopsis thaliana GN=CINV2 PE=1 SV=1[more]
INVD_ARATH6.5e-1061.02Probable alkaline/neutral invertase D OS=Arabidopsis thaliana GN=INVD PE=2 SV=1[more]
CINV1_ARATH1.9e-0961.02Alkaline/neutral invertase CINV1 OS=Arabidopsis thaliana GN=CINV1 PE=1 SV=1[more]
INVF_ARATH4.2e-0959.32Probable alkaline/neutral invertase F OS=Arabidopsis thaliana GN=INVF PE=2 SV=1[more]
BLAST of CU154156 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5W2_CUCSA6.8e-1479.31Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009210 PE=4 SV=1[more]
A0A0D2NI51_GOSRA7.5e-1375.86Uncharacterized protein OS=Gossypium raimondii GN=B456_005G252100 PE=4 SV=1[more]
A0A0B0PU09_GOSAR7.5e-1375.86Protein degV OS=Gossypium arboreum GN=F383_08817 PE=4 SV=1[more]
S4SKC1_ACTCH3.7e-1275.44Neutral invertase OS=Actinidia chinensis GN=NIK PE=2 SV=1[more]
A0A068TLY6_COFCA4.9e-1274.14Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014151001 PE=4 SV=1[more]
BLAST of CU154156 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454175|ref|XP_004144831.1|4.4e-1479.31PREDICTED: probable alkaline/neutral invertase B [Cucumis sativus][more]
gi|659094308|ref|XP_008447991.1|4.4e-1479.31PREDICTED: alkaline/neutral invertase CINV2 [Cucumis melo][more]
gi|823161159|ref|XP_012480445.1|4.8e-1375.86PREDICTED: probable alkaline/neutral invertase B [Gossypium raimondii][more]
gi|728850530|gb|KHG29973.1|4.8e-1375.86Protein degV [Gossypium arboreum][more]
gi|747082380|ref|XP_011088508.1|1.4e-1274.14PREDICTED: alkaline/neutral invertase CINV2-like [Sesamum indicum][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G009210Csa7G009210gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0204868G0204868EST