CU154145 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU154145
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	14-3-3 protein beta/alpha-B
Location	Chr4 : 6193712 .. 6194290 (+)
Sequence length	166

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACTCTTTGGACTTCTGATATTGGGGATGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCGAGGGGGAGGACATGGACAGTTAGTTGCGTTGTTGTGAGTTG

Library


Library category	ESTs
gynoecious flower library	1

Homology

[Close]

BLAST of CU154145 vs. Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-13
Identity = 36/38 (94.74%), Postives = 35/38 (92.11%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASK 62
           EESYKDSTLIMQLLRDNLTLWTSDI +EAGDEIKEASK
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDINEEAGDEIKEASK 254

Query: 63   117
           
Sbjct: 277  254

[Close]

BLAST of CU154145 vs. Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 4.5e-13
Identity = 36/38 (94.74%), Postives = 35/38 (92.11%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASK 62
           EESYKDSTLIMQLLRDNLTLWTSD+ DEAGDEIKEASK
Sbjct: 213 EESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIKEASK 250

Query: 63   117
           
Sbjct: 273  250

[Close]

BLAST of CU154145 vs. Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.7e-12
Identity = 35/41 (85.37%), Postives = 35/41 (85.37%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSD  D+ GD+IKEASK ES
Sbjct: 215 EESYKDSTLIMQLLRDNLTLWTSDNADDVGDDIKEASKPES 255

Query: 63   122
           
Sbjct: 275  255

Query: 123  126
           
Sbjct: 335  255

[Close]

BLAST of CU154145 vs. Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 1.7e-12
Identity = 34/38 (89.47%), Postives = 34/38 (89.47%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASK 62
           EESYKDSTLIMQLLRDNLTLWTSD+ DEAGD+IKEA K
Sbjct: 216 EESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEAPK 253

Query: 63   117
           
Sbjct: 276  253

[Close]

BLAST of CU154145 vs. Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.2e-12
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRE 62
           EESYKDSTLIMQLLRDNLTLWTSDI D AGDEIKE SK++
Sbjct: 215 EESYKDSTLIMQLLRDNLTLWTSDITDIAGDEIKETSKQQ 254

Query: 63   122
           
Sbjct: 275  254

[Close]

BLAST of CU154145 vs. TrEMBL
Match: A0A0A0KVK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G094520 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.3e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. TrEMBL
Match: F2YZ44_HEVBR (14-3-3 protein 3 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDIADEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. TrEMBL
Match: F2YZ43_HEVBR (14-3-3 protein 2 OS=Hevea brasiliensis PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. TrEMBL
Match: A0A067KD35_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12969 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. TrEMBL
Match: D5IBV3_MANES (14-3-3 protein OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 5.3e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. NCBI nr
Match: gi|449438841|ref|XP_004137196.1| (PREDICTED: 14-3-3-like protein [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 9.0e-14
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. NCBI nr
Match: gi|326694867|gb|AEA03664.1| (14-3-3 protein 3 [Hevea brasiliensis])

HSP 1 Score: 81.6 bits (200), Expect = 4.5e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDIADEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. NCBI nr
Match: gi|802634322|ref|XP_012077948.1| (PREDICTED: 14-3-3-like protein A [Jatropha curcas])

HSP 1 Score: 80.9 bits (198), Expect = 7.7e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. NCBI nr
Match: gi|291293221|gb|ADD92154.1| (14-3-3 protein [Manihot esculenta])

HSP 1 Score: 80.9 bits (198), Expect = 7.7e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

[Close]

BLAST of CU154145 vs. NCBI nr
Match: gi|326694865|gb|AEA03663.1| (14-3-3 protein 2 [Hevea brasiliensis])

HSP 1 Score: 80.9 bits (198), Expect = 7.7e-13
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 3


Query: 3   EESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRES 62
           EESYKDSTLIMQLLRDNLTLWTSDI DEAGDEIKEASKRES
Sbjct: 217 EESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKEASKRES 257

Query: 63   122
           
Sbjct: 277  257

Query: 123  126
           
Sbjct: 337  257

The following BLAST results are available for this feature:

BLAST of CU154145 vs. Swiss-Prot


Match Name	E-value	Identity	Description
1433_LILLO	3.4e-13	94.74	14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1	[more]
14333_ARATH	4.5e-13	94.74	14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2	[more]
14334_SOLLC	1.7e-12	85.37	14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1	[more]
14335_ARATH	1.7e-12	89.47	14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2	[more]
1433A_SOYBN	2.2e-12	87.50	14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1	[more]

BLAST of CU154145 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVK8_CUCSA	6.3e-14	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G094520 PE=3 SV=1	[more]
F2YZ44_HEVBR	3.1e-13	97.56	14-3-3 protein 3 OS=Hevea brasiliensis PE=2 SV=1	[more]
F2YZ43_HEVBR	5.3e-13	97.56	14-3-3 protein 2 OS=Hevea brasiliensis PE=2 SV=1	[more]
A0A067KD35_JATCU	5.3e-13	97.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12969 PE=3 SV=1	[more]
D5IBV3_MANES	5.3e-13	97.56	14-3-3 protein OS=Manihot esculenta PE=2 SV=1	[more]

BLAST of CU154145 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438841\|ref\|XP_004137196.1\|	9.0e-14	100.00	PREDICTED: 14-3-3-like protein [Cucumis sativus]	[more]
gi\|326694867\|gb\|AEA03664.1\|	4.5e-13	97.56	14-3-3 protein 3 [Hevea brasiliensis]	[more]
gi\|802634322\|ref\|XP_012077948.1\|	7.7e-13	97.56	PREDICTED: 14-3-3-like protein A [Jatropha curcas]	[more]
gi\|291293221\|gb\|ADD92154.1\|	7.7e-13	97.56	14-3-3 protein [Manihot esculenta]	[more]
gi\|326694865\|gb\|AEA03663.1\|	7.7e-13	97.56	14-3-3 protein 2 [Hevea brasiliensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000308	14-3-3
IPR023409	14-3-3_CS
IPR023410	14-3-3_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0019904	protein domain specific binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0019904	protein domain specific binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa4G094520	Csa4G094520	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0204792	G0204792	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000308	14-3-3 protein	PANTHER	PTHR18860	14-3-3 PROTEIN	coord: 2..42 score: 2.5
IPR023409	14-3-3 protein, conserved site	PROSITE	PS00797	1433_2	coord: 5..24 scor
IPR023410	14-3-3 domain	PFAM	PF00244	14-3-3	coord: 2..23 score: 3.
IPR023410	14-3-3 domain	unknown	SSF48445	14-3-3 protein	coord: 2..30 score: 5.06
None	No IPR available	GENE3D	G3DSA:1.20.190.20		coord: 2..23 score: 5.2