CU151987 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU151987
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionZinc finger (C3HC4-type RING finger) family protein
LocationChr1 : 9247631 .. 9247772 (+)
Sequence length145
The following sequences are available for this feature:

transcribed_cluster sequence

CATTTGTGCACTGCACTTTTGTTGTCCGAGCTGAAGGAGATGAAGGAACGAATGGAAAAACCAACGCATCTACGAGGCTTCGGGAAGGGCATACGTTCTATCAGGACTAAGCTCTCATTCATGGCAACGAGCCACTGCACGTGGT
Library categoryESTs
gynoecious flower library1
BLAST of CU151987 vs. TrEMBL
Match: A0A0A0LXX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124000 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 3.5e-08
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 2

Query: 14  HFC---CPS*RR*RNEWKNQRIYEASGRAYVLSGLSSHSWQRATARG 73
           H C   C   +  +   +NQRIYEASGRAYVLSGLSSHSWQRATARG
Sbjct: 623 HLCTALCAELKEMKERMENQRIYEASGRAYVLSGLSSHSWQRATARG 669

Query: 74  133
           
Sbjct: 683 669

Query: 134 146
           
Sbjct: 743 669

BLAST of CU151987 vs. TrEMBL
Match: A0A0A0LXX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124000 PE=4 SV=1)

HSP 1 Score: 32.0 bits (71), Expect = 2.5e+02
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 1

Query: 1   HLCTALLLSELKEMKERME 58
           HLCTAL  +ELKEMKERME
Sbjct: 623 HLCTALC-AELKEMKERME 640


HSP 2 Score: 60.5 bits (145), Expect = 6.6e-07
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 59  NQRIYEASGRAYVLSGLSSHSWQRATARG 118
           N+RIYEASGRAYVLSGLSSHSWQRATARG
Sbjct: 648 NRRIYEASGRAYVLSGLSSHSWQRATARG 676

Query: 119 146
           
Sbjct: 708 676

BLAST of CU151987 vs. TrEMBL
Match: A5BI34_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037547 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.6e-07
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 59  NQRIYEASGRAYVLSGLSSHSWQRATARG 118
           N+RIYEASGRAYVLSGLSSHSWQRATARG
Sbjct: 648 NRRIYEASGRAYVLSGLSSHSWQRATARG 676

Query: 119 146
           
Sbjct: 708 676

BLAST of CU151987 vs. TrEMBL
Match: A0A151TNF1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_022181 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.7e-07
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 2

Query: 59  NQRIYEASGRAYVLSGLSSHSWQRATARG 118
           NQRIYE SGRAYVLSGLSSHSWQRATARG
Sbjct: 555 NQRIYEQSGRAYVLSGLSSHSWQRATARG 583

Query: 119 146
           
Sbjct: 615 583

BLAST of CU151987 vs. TrEMBL
Match: A0A0B2PDF5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_024633 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-06
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 2

Query: 59  NQRIYEASGRAYVLSGLSSHSWQRATARG 118
           NQR+YE SGRAYVLSGLSSHSWQRATARG
Sbjct: 550 NQRVYEQSGRAYVLSGLSSHSWQRATARG 578

Query: 119 146
           
Sbjct: 610 578

BLAST of CU151987 vs. NCBI nr
Match: gi|659071949|ref|XP_008462750.1| (PREDICTED: uncharacterized protein LOC103501034 [Cucumis melo])

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-08
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 2

Query: 14  HFC---CPS*RR*RNEWKNQRIYEASGRAYVLSGLSSHSWQRATARG 73
           H C   C   +  +   +NQRIYEASGRAYVLSGLSSHSWQRATARG
Sbjct: 624 HLCTALCAELKEMKERMENQRIYEASGRAYVLSGLSSHSWQRATARG 670

Query: 74  133
           
Sbjct: 684 670

Query: 134 146
           
Sbjct: 744 670

BLAST of CU151987 vs. NCBI nr
Match: gi|449443582|ref|XP_004139556.1| (PREDICTED: uncharacterized protein LOC101222940 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-08
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 2

Query: 14  HFC---CPS*RR*RNEWKNQRIYEASGRAYVLSGLSSHSWQRATARG 73
           H C   C   +  +   +NQRIYEASGRAYVLSGLSSHSWQRATARG
Sbjct: 623 HLCTALCAELKEMKERMENQRIYEASGRAYVLSGLSSHSWQRATARG 669

Query: 74  133
           
Sbjct: 683 669

Query: 134 146
           
Sbjct: 743 669

BLAST of CU151987 vs. NCBI nr
Match: gi|702272784|ref|XP_010043775.1| (PREDICTED: uncharacterized protein LOC104432891 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-07
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 2

Query: 23  CPS*RR*RNEWKNQRIYEASGRAYVLSGLSSHSWQRATARG 82
           C   +  ++   N+R+YEASGRAYVLSGLSSHSWQRATARG
Sbjct: 649 CAELKEMQDRMANRRVYEASGRAYVLSGLSSHSWQRATARG 689

Query: 83  142
           
Sbjct: 709 689

Query: 143 146
           
Sbjct: 769 689

BLAST of CU151987 vs. NCBI nr
Match: gi|702272780|ref|XP_010043773.1| (PREDICTED: uncharacterized protein LOC104432891 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 61.6 bits (148), Expect = 4.3e-07
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 2

Query: 23  CPS*RR*RNEWKNQRIYEASGRAYVLSGLSSHSWQRATARG 82
           C   +  ++   N+R+YEASGRAYVLSGLSSHSWQRATARG
Sbjct: 649 CAELKEMQDRMANRRVYEASGRAYVLSGLSSHSWQRATARG 689

Query: 83  142
           
Sbjct: 709 689

Query: 143 146
           
Sbjct: 769 689

BLAST of CU151987 vs. NCBI nr
Match: gi|225435353|ref|XP_002285265.1| (PREDICTED: uncharacterized protein LOC100233041 [Vitis vinifera])

HSP 1 Score: 60.5 bits (145), Expect = 9.5e-07
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 59  NQRIYEASGRAYVLSGLSSHSWQRATARG 118
           N+RIYEASGRAYVLSGLSSHSWQRATARG
Sbjct: 648 NRRIYEASGRAYVLSGLSSHSWQRATARG 676

Query: 119 146
           
Sbjct: 708 676

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LXX5_CUCSA3.5e-0868.09Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124000 PE=4 SV=1[more]
A0A0A0LXX5_CUCSA2.5e+0284.21Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124000 PE=4 SV=1[more]
A5BI34_VITVI6.6e-0796.55Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037547 PE=4 SV=1[more]
A0A151TNF1_CAJCA8.7e-0796.55Uncharacterized protein OS=Cajanus cajan GN=KK1_022181 PE=4 SV=1[more]
A0A0B2PDF5_GLYSO1.1e-0693.10Uncharacterized protein OS=Glycine soja GN=glysoja_024633 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659071949|ref|XP_008462750.1|3.0e-0868.09PREDICTED: uncharacterized protein LOC103501034 [Cucumis melo][more]
gi|449443582|ref|XP_004139556.1|3.0e-0868.09PREDICTED: uncharacterized protein LOC101222940 [Cucumis sativus][more]
gi|702272784|ref|XP_010043775.1|4.3e-0768.29PREDICTED: uncharacterized protein LOC104432891 isoform X2 [Eucalyptus grandis][more]
gi|702272780|ref|XP_010043773.1|4.3e-0768.29PREDICTED: uncharacterized protein LOC104432891 isoform X1 [Eucalyptus grandis][more]
gi|225435353|ref|XP_002285265.1|9.5e-0796.55PREDICTED: uncharacterized protein LOC100233041 [Vitis vinifera][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G124000Csa1G124000gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0188403G0188403EST