CU151935 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU151935
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTubby-like F-box protein
LocationChr6 : 4386905 .. 4387138 (-)
Sequence length120
The following sequences are available for this feature:

transcribed_cluster sequence

TCATTGGCTGACAAGACGATATAATCAAGATCGAGCAACGGTTATATTGGAAAGCTAAGATCAAACTTTCTGGGAACCAAGTTCATTATATATGATAACACAGCCTCCTTACAACAGCAA
Library categoryESTs
gynoecious flower library1
BLAST of CU151935 vs. Swiss-Prot
Match: TLP7_ORYSJ (Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 5.1e-06
Identity = 26/32 (81.25%), Postives = 26/32 (81.25%), Query Frame = 1

Query: 1   SLADKTI*SRSSNGYIGKLRSNFLGTKFIIYD 60
           S+  K I SRSS+GYIGKLRSNFLGTKFIIYD
Sbjct: 175 SMDSKNI-SRSSSGYIGKLRSNFLGTKFIIYD 205

Query: 61  97
           
Sbjct: 235 205

BLAST of CU151935 vs. Swiss-Prot
Match: TLP12_ORYSJ (Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.7e-06
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 1

Query: 25  SRSSNGYIGKLRSNFLGTKFIIYD 84
           SRSSNGY+GK+RSNFLGTKF++YD
Sbjct: 185 SRSSNGYVGKMRSNFLGTKFVVYD 208

Query: 85  97
           
Sbjct: 245 208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TLP7_ORYSJ5.1e-0681.25Tubby-like F-box protein 7 OS=Oryza sativa subsp. japonica GN=TULP7 PE=2 SV=1[more]
TLP12_ORYSJ6.7e-0683.33Tubby-like F-box protein 12 OS=Oryza sativa subsp. japonica GN=TULP12 PE=2 SV=1[more]
Match NameE-valueIdentityDescription

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G056560Csa6G056560gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0187864G0187864EST