CU150359 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU150359
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionARM repeat superfamily protein
LocationChr6 : 17904476 .. 17904645 (-)
Sequence length179
The following sequences are available for this feature:

transcribed_cluster sequence

GGATTCCATTATGGAGGTTAAGGGCCGTGCAGTTTCCACTTTAGTCTCTCGCCTCAGCTAACCGTACTACCGAAGACAAAATACCGATGCGAATCCTTGTCCGAGCTTCGATTGATGACCAAAAACGACGCCCAAAGCCGTTCTCTCATCGTCCATGCCGGTGCTCTTCCTTATTTGTC
Library categoryESTs
gynoecious flower library1
BLAST of CU150359 vs. TrEMBL
Match: A0A0A0KDY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401390 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.4e-08
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1

Query: 85  RCESLSELRLMTKNDAQSRSLIVHAGALPYL 144
           RCESLSELRLMTKNDAQSRSLIVHAGALPYL
Sbjct: 23  RCESLSELRLMTKNDAQSRSLIVHAGALPYL 53

Query: 145 178
           
Sbjct: 83  53

BLAST of CU150359 vs. TrEMBL
Match: A0A0A0KDY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401390 PE=4 SV=1)

HSP 1 Score: 32.3 bits (72), Expect = 2.4e+02
Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 2

Query: 11 MEVKGRAVSTLVSRLS 59
          MEVKGRAVSTLVSRLS
Sbjct: 1  MEVKGRAVSTLVSRLS 16

BLAST of CU150359 vs. NCBI nr
Match: gi|449458065|ref|XP_004146768.1| (PREDICTED: protein spotted leaf 11 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-07
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1

Query: 85  RCESLSELRLMTKNDAQSRSLIVHAGALPYL 144
           RCESLSELRLMTKNDAQSRSLIVHAGALPYL
Sbjct: 23  RCESLSELRLMTKNDAQSRSLIVHAGALPYL 53

Query: 145 178
           
Sbjct: 83  53

BLAST of CU150359 vs. NCBI nr
Match: gi|659089251|ref|XP_008445408.1| (PREDICTED: protein spotted leaf 11 [Cucumis melo])

HSP 1 Score: 58.2 bits (139), Expect = 5.8e-06
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 1

Query: 85  RCESLSELRLMTKNDAQSRSLIVHAGALPYL 144
           RCESLSELRLMTKND +SRSLIV AGALPYL
Sbjct: 23  RCESLSELRLMTKNDVESRSLIVEAGALPYL 53

Query: 145 178
           
Sbjct: 83  53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KDY4_CUCSA7.4e-08100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401390 PE=4 SV=1[more]
A0A0A0KDY4_CUCSA2.4e+02100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401390 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449458065|ref|XP_004146768.1|1.1e-07100.00PREDICTED: protein spotted leaf 11 [Cucumis sativus][more]
gi|659089251|ref|XP_008445408.1|5.8e-0690.32PREDICTED: protein spotted leaf 11 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G401390Csa6G401390gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0175448G0175448EST