CU150244 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU150244
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTransmembrane 9 superfamily member
LocationChr1 : 12541096 .. 12541305 (+)
Sequence length210
The following sequences are available for this feature:

transcribed_cluster sequence

ACATGAACCCTACATTCTCCGTTCTCATTTGGAGGGATACTCCCTTTTGGGGCAGTCTTTATTGAGCTGTTTTTCATCCTTACCTCCATATGGTTGCACCAATTTTACTACATCTTTGGTTTCCTCTTCATTGTGTTCCTCATCCTGATAGTCACTTGCGCTGAGATCACAATTGTGCTCTGCTACTTCCAACTGTGCAGTGAGACTACA
Library categoryESTs
gynoecious flower library1
BLAST of CU150244 vs. Swiss-Prot
Match: TMN10_ARATH (Transmembrane 9 superfamily member 10 OS=Arabidopsis thaliana GN=TMN10 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-15
Identity = 40/58 (68.97%), Postives = 39/58 (67.24%), Query Frame = 1

Query: 31  GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSE 90
           GGILPFGAVFIELFFILTSIWLHQ                 TCAEIT+VLCYFQLCSE
Sbjct: 501 GGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIITCAEITVVLCYFQLCSE 558

Query: 91  150
           
Sbjct: 561 558

Query: 151 205
           
Sbjct: 621 558

BLAST of CU150244 vs. Swiss-Prot
Match: TMN9_ARATH (Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana GN=TMN9 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-14
Identity = 40/58 (68.97%), Postives = 39/58 (67.24%), Query Frame = 1

Query: 31  GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSE 90
           GGILPFGAVFIELFFILTSIWL+Q                 TCAEITIVLCYFQLCSE
Sbjct: 508 GGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILMVTCAEITIVLCYFQLCSE 565

Query: 91  150
           
Sbjct: 568 565

Query: 151 205
           
Sbjct: 628 565

BLAST of CU150244 vs. Swiss-Prot
Match: TMN6_ARATH (Transmembrane 9 superfamily member 6 OS=Arabidopsis thaliana GN=TMN6 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-14
Identity = 40/58 (68.97%), Postives = 39/58 (67.24%), Query Frame = 1

Query: 31  GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSE 90
           GGILPFGAVFIELFFILTSIWL+Q                 TCAEITIVLCYFQLCSE
Sbjct: 501 GGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFLILIVTCAEITIVLCYFQLCSE 558

Query: 91  150
           
Sbjct: 561 558

Query: 151 205
           
Sbjct: 621 558

BLAST of CU150244 vs. Swiss-Prot
Match: TMN8_ARATH (Transmembrane 9 superfamily member 8 OS=Arabidopsis thaliana GN=TMN8 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14
Identity = 39/58 (67.24%), Postives = 39/58 (67.24%), Query Frame = 1

Query: 31  GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSE 90
           GGILPFGAVFIELFFILTSIWL+Q                 TCAEIT+VLCYFQLCSE
Sbjct: 512 GGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCAEITVVLCYFQLCSE 569

Query: 91  150
           
Sbjct: 572 569

Query: 151 205
           
Sbjct: 632 569

BLAST of CU150244 vs. Swiss-Prot
Match: TMN7_ARATH (Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14
Identity = 39/58 (67.24%), Postives = 39/58 (67.24%), Query Frame = 1

Query: 31  GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLCYFQLCSE 90
           GGILPFGAVFIELFFILTSIWL+Q                 TCAEIT+VLCYFQLCSE
Sbjct: 505 GGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFLILIVTCAEITVVLCYFQLCSE 562

Query: 91  150
           
Sbjct: 565 562

Query: 151 205
           
Sbjct: 625 562

BLAST of CU150244 vs. TrEMBL
Match: A0A0D2U4Y3_GOSRA (Transmembrane 9 superfamily member OS=Gossypium raimondii GN=B456_013G215900 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.7e-14
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           LH  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEIT+VLC
Sbjct: 493 LHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILVVTCAEITVVLC 552

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 553 YFQLCSE 559

Query: 130 189
           
Sbjct: 613 559

Query: 190 205
           
Sbjct: 673 559

BLAST of CU150244 vs. TrEMBL
Match: A0A0B0NI98_GOSAR (Transmembrane 9 superfamily member OS=Gossypium arboreum GN=F383_18064 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.7e-14
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           LH  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEIT+VLC
Sbjct: 494 LHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILVVTCAEITVVLC 553

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 554 YFQLCSE 560

Query: 130 189
           
Sbjct: 614 560

Query: 190 205
           
Sbjct: 674 560

BLAST of CU150244 vs. TrEMBL
Match: M5VWG0_PRUPE (Transmembrane 9 superfamily member OS=Prunus persica GN=PRUPE_ppa002742mg PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 8.2e-14
Identity = 44/67 (65.67%), Postives = 46/67 (68.66%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           ++S FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEITIVLC
Sbjct: 493 MNSAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIITCAEITIVLC 552

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 553 YFQLCSE 559

Query: 130 189
           
Sbjct: 613 559

Query: 190 205
           
Sbjct: 673 559

BLAST of CU150244 vs. TrEMBL
Match: V7B1P7_PHAVU (Transmembrane 9 superfamily member OS=Phaseolus vulgaris GN=PHAVU_009G204800g PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-13
Identity = 44/67 (65.67%), Postives = 46/67 (68.66%), Query Frame = 1

Query: 10  LHSPFS--FGGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           ++S FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEITIVLC
Sbjct: 498 MNSVFSVLIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIVTCAEITIVLC 557

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 558 YFQLCSE 564

Query: 130 189
           
Sbjct: 618 564

Query: 190 205
           
Sbjct: 678 564

BLAST of CU150244 vs. TrEMBL
Match: A0A151T065_CAJCA (Transmembrane 9 superfamily member OS=Cajanus cajan GN=KK1_022849 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-13
Identity = 44/67 (65.67%), Postives = 46/67 (68.66%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           ++S FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEITIVLC
Sbjct: 498 MNSVFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFLILIVTCAEITIVLC 557

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 558 YFQLCSE 564

Query: 130 189
           
Sbjct: 618 564

Query: 190 205
           
Sbjct: 678 564

BLAST of CU150244 vs. NCBI nr
Match: gi|823259072|ref|XP_012462237.1| (PREDICTED: transmembrane 9 superfamily member 10-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-13
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           LH  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEIT+VLC
Sbjct: 494 LHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILVVTCAEITVVLC 553

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 554 YFQLCSE 560

Query: 130 189
           
Sbjct: 614 560

Query: 190 205
           
Sbjct: 674 560

BLAST of CU150244 vs. NCBI nr
Match: gi|823259074|ref|XP_012462238.1| (PREDICTED: transmembrane 9 superfamily member 10-like isoform X2 [Gossypium raimondii])

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-13
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           LH  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEIT+VLC
Sbjct: 493 LHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILVVTCAEITVVLC 552

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 553 YFQLCSE 559

Query: 130 189
           
Sbjct: 613 559

Query: 190 205
           
Sbjct: 673 559

BLAST of CU150244 vs. NCBI nr
Match: gi|728832909|gb|KHG12352.1| (Putative phagocytic receptor 1a [Gossypium arboreum])

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-13
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           LH  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEIT+VLC
Sbjct: 494 LHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILVVTCAEITVVLC 553

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 554 YFQLCSE 560

Query: 130 189
           
Sbjct: 614 560

Query: 190 205
           
Sbjct: 674 560

BLAST of CU150244 vs. NCBI nr
Match: gi|658063658|ref|XP_008367749.1| (PREDICTED: transmembrane 9 superfamily member 4-like [Malus domestica])

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-13
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           +H  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEITIVLC
Sbjct: 493 MHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIITCAEITIVLC 552

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 553 YFQLCSE 559

Query: 130 189
           
Sbjct: 613 559

Query: 190 205
           
Sbjct: 673 559

BLAST of CU150244 vs. NCBI nr
Match: gi|694380054|ref|XP_009366179.1| (PREDICTED: transmembrane 9 superfamily member 4-like [Pyrus x bretschneideri])

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-13
Identity = 44/67 (65.67%), Postives = 45/67 (67.16%), Query Frame = 1

Query: 10  LHSPFSF--GGILPFGAVFIELFFILTSIWLHQXXXXXXXXXXXXXXXXXTCAEITIVLC 69
           +H  FS   GGILPFGAVFIELFFILTSIWLHQ                 TCAEITIVLC
Sbjct: 493 MHPAFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIITCAEITIVLC 552

Query: 70  YFQLCSE 129
           YFQLCSE
Sbjct: 553 YFQLCSE 559

Query: 130 189
           
Sbjct: 613 559

Query: 190 205
           
Sbjct: 673 559

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TMN10_ARATH2.1e-1568.97Transmembrane 9 superfamily member 10 OS=Arabidopsis thaliana GN=TMN10 PE=2 SV=1[more]
TMN9_ARATH1.1e-1468.97Transmembrane 9 superfamily member 9 OS=Arabidopsis thaliana GN=TMN9 PE=2 SV=1[more]
TMN6_ARATH1.1e-1468.97Transmembrane 9 superfamily member 6 OS=Arabidopsis thaliana GN=TMN6 PE=2 SV=1[more]
TMN8_ARATH1.4e-1467.24Transmembrane 9 superfamily member 8 OS=Arabidopsis thaliana GN=TMN8 PE=2 SV=1[more]
TMN7_ARATH1.4e-1467.24Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana GN=TMN7 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0D2U4Y3_GOSRA3.7e-1465.67Transmembrane 9 superfamily member OS=Gossypium raimondii GN=B456_013G215900 PE=... [more]
A0A0B0NI98_GOSAR3.7e-1465.67Transmembrane 9 superfamily member OS=Gossypium arboreum GN=F383_18064 PE=3 SV=1[more]
M5VWG0_PRUPE8.2e-1465.67Transmembrane 9 superfamily member OS=Prunus persica GN=PRUPE_ppa002742mg PE=3 S... [more]
V7B1P7_PHAVU1.1e-1365.67Transmembrane 9 superfamily member OS=Phaseolus vulgaris GN=PHAVU_009G204800g PE... [more]
A0A151T065_CAJCA1.1e-1365.67Transmembrane 9 superfamily member OS=Cajanus cajan GN=KK1_022849 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|823259072|ref|XP_012462237.1|2.0e-1365.67PREDICTED: transmembrane 9 superfamily member 10-like isoform X1 [Gossypium raim... [more]
gi|823259074|ref|XP_012462238.1|2.0e-1365.67PREDICTED: transmembrane 9 superfamily member 10-like isoform X2 [Gossypium raim... [more]
gi|728832909|gb|KHG12352.1|2.0e-1365.67Putative phagocytic receptor 1a [Gossypium arboreum][more]
gi|658063658|ref|XP_008367749.1|2.6e-1365.67PREDICTED: transmembrane 9 superfamily member 4-like [Malus domestica][more]
gi|694380054|ref|XP_009366179.1|2.6e-1365.67PREDICTED: transmembrane 9 superfamily member 4-like [Pyrus x bretschneideri][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G256720Csa1G256720gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0174220G0174220EST