CU149730 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU149730
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr3 : 13143985 .. 13144154 (+)
Sequence length	170

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GGACGCAAATTCCCAGCAGATAGAGCCTCAGCAGCATCAGCATTACGTTGGTCATCGTCGAGGGTGCTACCATACTCGCTCTTGATGGACCATGAGTCAGCAGCCACTGAGCGATCATCGTCAAGAGACTAGATCAACGGCGGACGGAGCAGCACGAGCCTGCTGCAACA

Library


Library category	ESTs
gynoecious flower library	1

Homology

[Close]

BLAST of CU149730 vs. TrEMBL
Match: A0A0A0L6T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187230 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.9e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR
Sbjct: 29  DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 68

Query: 63   122
           
Sbjct: 89   68

[Close]

BLAST of CU149730 vs. TrEMBL
Match: M5XCP5_PRUPE (Protein-lysine N-methyltransferase PRUPE_ppa008451mg OS=Prunus persica GN=PRUPE_ppa008451mg PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.0e-12
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKS+YGSTLDDDQR+ADAAEALSA NLR
Sbjct: 27  DDDRSVAADSWSIKSDYGSTLDDDQRHADAAEALSAANLR 66

Query: 63   122
           
Sbjct: 87   66

[Close]

BLAST of CU149730 vs. TrEMBL
Match: W9S0Z4_9ROSA (Protein-lysine N-methyltransferase L484_027123 OS=Morus notabilis GN=L484_027123 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.0e-12
Identity = 36/40 (90.00%), Postives = 39/40 (97.50%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRS+AADSWSIKSEYGSTLDD+QR+ADAAEALSAGN R
Sbjct: 29  DDDRSIAADSWSIKSEYGSTLDDEQRHADAAEALSAGNFR 68

Query: 63   122
           
Sbjct: 89   68

[Close]

BLAST of CU149730 vs. TrEMBL
Match: V7B0Y7_PHAVU (Protein-lysine N-methyltransferase PHAVU_008G009300g OS=Phaseolus vulgaris GN=PHAVU_008G009300g PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.8e-11
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQR+ADAAEALS  NLR
Sbjct: 30  DDDRSVAADSWSIKSEYGSTLDDDQRHADAAEALSNANLR 69

Query: 63   122
           
Sbjct: 90   69

[Close]

BLAST of CU149730 vs. TrEMBL
Match: A0A0L9TDE4_PHAAN (Protein-lysine N-methyltransferase LR48_Vigan549s009300 OS=Phaseolus angularis GN=LR48_Vigan549s009300 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.8e-11
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQR+ADAAEALS  NLR
Sbjct: 30  DDDRSVAADSWSIKSEYGSTLDDDQRHADAAEALSNANLR 69

Query: 63   122
           
Sbjct: 90   69

[Close]

BLAST of CU149730 vs. NCBI nr
Match: gi|449445949|ref|XP_004140734.1| (PREDICTED: methyltransferase-like protein 10 isoform X2 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR
Sbjct: 29  DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 68

Query: 63   122
           
Sbjct: 89   68

[Close]

BLAST of CU149730 vs. NCBI nr
Match: gi|778679869|ref|XP_011651204.1| (PREDICTED: methyltransferase-like protein 10 isoform X1 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR
Sbjct: 29  DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 68

Query: 63   122
           
Sbjct: 89   68

[Close]

BLAST of CU149730 vs. NCBI nr
Match: gi|700202315|gb|KGN57448.1| (hypothetical protein Csa_3G187230 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR
Sbjct: 29  DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 68

Query: 63   122
           
Sbjct: 89   68

[Close]

BLAST of CU149730 vs. NCBI nr
Match: gi|659114543|ref|XP_008457104.1| (PREDICTED: methyltransferase-like protein 10 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 6.1e-13
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR
Sbjct: 82  DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 121

Query: 63   122
           
Sbjct: 142  121

[Close]

BLAST of CU149730 vs. NCBI nr
Match: gi|729298792|ref|XP_010552063.1| (PREDICTED: uncharacterized protein LOC104822507 [Tarenaya hassleriana])

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-11
Identity = 37/40 (92.50%), Postives = 40/40 (100.00%), Query Frame = -1


Query: 3   DDDRSVAADSWSIKSEYGSTLDDDQRNADAAEALSAGNLR 62
           DDDRSVAADSWSIKSEYGSTLDD+QR+ADAAEALS+GNLR
Sbjct: 33  DDDRSVAADSWSIKSEYGSTLDDEQRHADAAEALSSGNLR 72

Query: 63   122
           
Sbjct: 93   72

The following BLAST results are available for this feature:

BLAST of CU149730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6T8_CUCSA	1.9e-13	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187230 PE=4 SV=1	[more]
M5XCP5_PRUPE	8.0e-12	92.50	Protein-lysine N-methyltransferase PRUPE_ppa008451mg OS=Prunus persica GN=PRUPE_...	[more]
W9S0Z4_9ROSA	8.0e-12	90.00	Protein-lysine N-methyltransferase L484_027123 OS=Morus notabilis GN=L484_027123...	[more]
V7B0Y7_PHAVU	1.8e-11	92.50	Protein-lysine N-methyltransferase PHAVU_008G009300g OS=Phaseolus vulgaris GN=PH...	[more]
A0A0L9TDE4_PHAAN	1.8e-11	92.50	Protein-lysine N-methyltransferase LR48_Vigan549s009300 OS=Phaseolus angularis G...	[more]

BLAST of CU149730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445949\|ref\|XP_004140734.1\|	6.1e-13	100.00	PREDICTED: methyltransferase-like protein 10 isoform X2 [Cucumis sativus]	[more]
gi\|778679869\|ref\|XP_011651204.1\|	6.1e-13	100.00	PREDICTED: methyltransferase-like protein 10 isoform X1 [Cucumis sativus]	[more]
gi\|700202315\|gb\|KGN57448.1\|	6.1e-13	100.00	hypothetical protein Csa_3G187230 [Cucumis sativus]	[more]
gi\|659114543\|ref\|XP_008457104.1\|	6.1e-13	100.00	PREDICTED: methyltransferase-like protein 10 [Cucumis melo]	[more]
gi\|729298792\|ref\|XP_010552063.1\|	1.5e-11	92.50	PREDICTED: uncharacterized protein LOC104822507 [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR026635	Efm4/METTL10

Vocabulary: **Molecular Function**
Term	Definition
GO:0008168	methyltransferase activity

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa3G187230	Csa3G187230	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
G0169552	G0169552	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026635	Protein-lysine N-methyltransferase Efm4	PANTHER	PTHR12843	UNCHARACTERIZED	coord: 17..56 score: 1.3
None	No IPR available	PANTHER	PTHR12843:SF5	METHYLTRANSFERASE-LIKE PROTEIN 10	coord: 17..56 score: 1.3