CU148622 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU148622
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Descriptiontransducin family protein / WD-40 repeat family protein
LocationChr1 : 42169 .. 42772 (-)
Sequence length247
The following sequences are available for this feature:

transcribed_cluster sequence

GGAGAGTTGATGATCAGAGTGATATGAAAAGAAGAAAGTTTGAACAAAAAGATCACAAGGAACTGATTTCATTAGTACGTAGTAGCTCTTCCTCATTGACTGCCCAACTGGATGCTAGTTATTATTTTACTAGTCAGCACAAGAGAAAACTGAGAAGCCTTGCTCCAGGTCCAGTCAATGACCAACTTTTTGTTACTAGAAGATGGTACACAGTGACCAAACAATCTAACAAGTGCTTGATGTTGGG
Library categoryESTs
gynoecious flower library1
BLAST of CU148622 vs. TrEMBL
Match: A0A0A0LRK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000560 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-24
Identity = 60/65 (92.31%), Postives = 60/65 (92.31%), Query Frame = 3

Query: 3   RVDDQSDMKRRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVND 62
           RVDDQSDMKRRKFEQKDHKELISLVR     LTAQLDASYYFTSQHKRKLRSLAPGPVND
Sbjct: 156 RVDDQSDMKRRKFEQKDHKELISLVRSSSSSLTAQLDASYYFTSQHKRKLRSLAPGPVND 215

Query: 63  QLFVT 122
           QLFVT
Sbjct: 216 QLFVT 220

Query: 123 182
           
Sbjct: 276 220

Query: 183 198
           
Sbjct: 336 220

BLAST of CU148622 vs. TrEMBL
Match: E5GBL5_CUCME (Nucleotide binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-17
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 3

Query: 42  EQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQLFVTRRWYTVTK 101
           EQKDHKELISLVR     LTAQ DASYYFTSQHKRKLRSLAPGPVNDQLFVTR + ++  
Sbjct: 213 EQKDHKELISLVRSSSSSLTAQPDASYYFTSQHKRKLRSLAPGPVNDQLFVTRSFASLLC 272

Query: 102 QSN 161
            +N
Sbjct: 273 ATN 275

Query: 162 221
           
Sbjct: 333 275

Query: 222 231
           
Sbjct: 393 275

BLAST of CU148622 vs. TrEMBL
Match: V7B030_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G161300g PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-09
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 3

Query: 30  RRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQLFVT 89
           +RKFEQK+HKELI L+R     +  Q   S + +SQHKRKLRS+A  PVNDQLFVT
Sbjct: 180 KRKFEQKEHKELIPLIRKSSSPILVQCQTSNHISSQHKRKLRSIALCPVNDQLFVT 235

Query: 90  149
           
Sbjct: 240 235

Query: 150 198
           
Sbjct: 300 235

BLAST of CU148622 vs. TrEMBL
Match: Q9FI51_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.2e-09
Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 3

Query: 30  RRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQLFVTRRWY 89
           +RKFEQK+HKELI L+       T +   S   +SQHKRKLRSL   PVN+QLF TR W 
Sbjct: 159 KRKFEQKEHKELIRLIARNSSPTTIKCHTSNQISSQHKRKLRSLILCPVNEQLFATRYWT 218

Query: 90  T 149
           T
Sbjct: 219 T 219

Query: 150 209
           
Sbjct: 279 219

Query: 210 213
           
Sbjct: 339 219

BLAST of CU148622 vs. TrEMBL
Match: M5WGN3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004129mg PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-08
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 3

Query: 6   VDDQSDMKRRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQ 65
           V+ Q    +RKFEQK+HKELI LVR        +  AS + +SQHKRKLRSL+  PVNDQ
Sbjct: 165 VELQDRGTKRKFEQKEHKELIPLVRTSSSPSIIRCYASNHISSQHKRKLRSLSLCPVNDQ 224

Query: 66  LFVT 125
           LFVT
Sbjct: 225 LFVT 228

Query: 126 185
           
Sbjct: 285 228

Query: 186 198
           
Sbjct: 345 228

BLAST of CU148622 vs. NCBI nr
Match: gi|778655191|ref|XP_011648713.1| (PREDICTED: uncharacterized protein LOC101206361 [Cucumis sativus])

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-24
Identity = 60/65 (92.31%), Postives = 60/65 (92.31%), Query Frame = 3

Query: 3   RVDDQSDMKRRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVND 62
           RVDDQSDMKRRKFEQKDHKELISLVR     LTAQLDASYYFTSQHKRKLRSLAPGPVND
Sbjct: 156 RVDDQSDMKRRKFEQKDHKELISLVRSSSSSLTAQLDASYYFTSQHKRKLRSLAPGPVND 215

Query: 63  QLFVT 122
           QLFVT
Sbjct: 216 QLFVT 220

Query: 123 182
           
Sbjct: 276 220

Query: 183 198
           
Sbjct: 336 220

BLAST of CU148622 vs. NCBI nr
Match: gi|659128775|ref|XP_008464363.1| (PREDICTED: uncharacterized protein LOC103502273 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-22
Identity = 57/64 (89.06%), Postives = 57/64 (89.06%), Query Frame = 3

Query: 6   VDDQSDMKRRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQ 65
           VDDQSD KRRKFEQKDHKELISLVR     LTAQ DASYYFTSQHKRKLRSLAPGPVNDQ
Sbjct: 158 VDDQSDRKRRKFEQKDHKELISLVRSSSSSLTAQPDASYYFTSQHKRKLRSLAPGPVNDQ 217

Query: 66  LFVT 125
           LFVT
Sbjct: 218 LFVT 221

Query: 126 185
           
Sbjct: 278 221

Query: 186 198
           
Sbjct: 338 221

BLAST of CU148622 vs. NCBI nr
Match: gi|307136000|gb|ADN33856.1| (nucleotide binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 94.7 bits (234), Expect = 7.7e-17
Identity = 48/63 (76.19%), Postives = 52/63 (82.54%), Query Frame = 3

Query: 42  EQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQLFVTRRWYTVTK 101
           EQKDHKELISLVR     LTAQ DASYYFTSQHKRKLRSLAPGPVNDQLFVTR + ++  
Sbjct: 213 EQKDHKELISLVRSSSSSLTAQPDASYYFTSQHKRKLRSLAPGPVNDQLFVTRSFASLLC 272

Query: 102 QSN 161
            +N
Sbjct: 273 ATN 275

Query: 162 221
           
Sbjct: 333 275

Query: 222 231
           
Sbjct: 393 275

BLAST of CU148622 vs. NCBI nr
Match: gi|593328850|ref|XP_007137852.1| (hypothetical protein PHAVU_009G161300g [Phaseolus vulgaris])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 3

Query: 30  RRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQLFVT 89
           +RKFEQK+HKELI L+R     +  Q   S + +SQHKRKLRS+A  PVNDQLFVT
Sbjct: 180 KRKFEQKEHKELIPLIRKSSSPILVQCQTSNHISSQHKRKLRSIALCPVNDQLFVT 235

Query: 90  149
           
Sbjct: 240 235

Query: 150 198
           
Sbjct: 300 235

BLAST of CU148622 vs. NCBI nr
Match: gi|694396746|ref|XP_009373645.1| (PREDICTED: uncharacterized protein LOC103962631 [Pyrus x bretschneideri])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 3

Query: 6   VDDQSDMKRRKFEQKDHKELISLVRXXXXXLTAQLDASYYFTSQHKRKLRSLAPGPVNDQ 65
           V+ Q + K+RKFEQK+HKEL+ LVR           AS + +SQHKRKLRSL+  PVNDQ
Sbjct: 166 VEVQDNGKKRKFEQKEHKELVPLVRTSSQPCKINCYASSHISSQHKRKLRSLSLCPVNDQ 225

Query: 66  LFVT 125
           LFVT
Sbjct: 226 LFVT 229

Query: 126 185
           
Sbjct: 286 229

Query: 186 198
           
Sbjct: 346 229

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LRK6_CUCSA1.2e-2492.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000560 PE=4 SV=1[more]
E5GBL5_CUCME7.0e-1776.19Nucleotide binding protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
V7B030_PHAVU1.8e-0960.71Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G161300g PE=4 SV=1[more]
Q9FI51_ARATH9.2e-0955.74Putative uncharacterized protein OS=Arabidopsis thaliana PE=4 SV=1[more]
M5WGN3_PRUPE1.2e-0857.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004129mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778655191|ref|XP_011648713.1|3.8e-2492.31PREDICTED: uncharacterized protein LOC101206361 [Cucumis sativus][more]
gi|659128775|ref|XP_008464363.1|3.6e-2289.06PREDICTED: uncharacterized protein LOC103502273 [Cucumis melo][more]
gi|307136000|gb|ADN33856.1|7.7e-1776.19nucleotide binding protein [Cucumis melo subsp. melo][more]
gi|593328850|ref|XP_007137852.1|2.6e-0960.71hypothetical protein PHAVU_009G161300g [Phaseolus vulgaris][more]
gi|694396746|ref|XP_009373645.1|2.6e-0957.81PREDICTED: uncharacterized protein LOC103962631 [Pyrus x bretschneideri][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G000560Csa1G000560gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0159271G0159271EST